<p>The <i>x</i>-axis shows the paired-sample t-test log<sub>2</sub> fold change of asymptomatic versus symptomatic patients, whereas the <i>y</i>-axis shows the −log<sub>10</sub> of the paired t-test p-values of asymptomatic versus symptomatic patients. Each dot represents a gene and the dot color depicts the gene's expression as shown by the standard deviation (SD) of the paired t-test log<sub>2</sub> fold change, e.g. shades of blue for less than or equal to −1 SD, grey for between −1 SD and +1 SD, and red for greater than or equal to +1 SD. A total of 345 genes were differentially expressed at more than 2 and less than −2 linear fold changes (p<0.01) and were considered statistically significant.</p
<p>Volcano plots depicting the fold difference in gene expression levels after consumption of LGG fo...
<p>Points in red indicate significance at an FDR of 10%. Points with a mean counts below the dashed ...
Expression data of genes are plotted as log2 fold change versus -log10 FDR corrected p-value. Red do...
<p>The plot shows the log fold-change on the X-axis versus the unadjusted P values (on the–log10 sca...
<p>A) Treated susceptible (S) relative to non-treated S plants (SWT vs SWO), B) Treated tolerant (T)...
<p>x-axes represent log2 fold-changes and y-axes represent the –log10(p-values) associated with the ...
<p>The x-axis represents the value of the log fold change (logarithm base 2) between different exper...
(A) The differential expression analysis results are shown in the volcano plot. Where the x-axis rep...
(A) Bland-Altman plot of normalized mean counts and shrunk (apeglm) Log2 fold-changes. The different...
a: Number of significant DEGcts. b-g: Volcano plots of DEGcts with the log2 fold change (logFC) on t...
<p><b>A</b> Volcano plot, whose X axis represents the fold change, log transformed, and Y axis, the ...
<p>Each point represents a gene, and colors correspond to the ranges of the negative log<sub>10 </su...
<p>The x-axis and y-axis show the fold changes on a log2 scale and the <i>P</i> on a –log10 scale, r...
The volcano plot was plotted by the ggplot2 package in R. The up-regulated DEGs are labeled by red d...
<p>Volcano plots of differentially expressed genes (p<0.01) in the unstimulated CD4<sup>+</sup> (lef...
<p>Volcano plots depicting the fold difference in gene expression levels after consumption of LGG fo...
<p>Points in red indicate significance at an FDR of 10%. Points with a mean counts below the dashed ...
Expression data of genes are plotted as log2 fold change versus -log10 FDR corrected p-value. Red do...
<p>The plot shows the log fold-change on the X-axis versus the unadjusted P values (on the–log10 sca...
<p>A) Treated susceptible (S) relative to non-treated S plants (SWT vs SWO), B) Treated tolerant (T)...
<p>x-axes represent log2 fold-changes and y-axes represent the –log10(p-values) associated with the ...
<p>The x-axis represents the value of the log fold change (logarithm base 2) between different exper...
(A) The differential expression analysis results are shown in the volcano plot. Where the x-axis rep...
(A) Bland-Altman plot of normalized mean counts and shrunk (apeglm) Log2 fold-changes. The different...
a: Number of significant DEGcts. b-g: Volcano plots of DEGcts with the log2 fold change (logFC) on t...
<p><b>A</b> Volcano plot, whose X axis represents the fold change, log transformed, and Y axis, the ...
<p>Each point represents a gene, and colors correspond to the ranges of the negative log<sub>10 </su...
<p>The x-axis and y-axis show the fold changes on a log2 scale and the <i>P</i> on a –log10 scale, r...
The volcano plot was plotted by the ggplot2 package in R. The up-regulated DEGs are labeled by red d...
<p>Volcano plots of differentially expressed genes (p<0.01) in the unstimulated CD4<sup>+</sup> (lef...
<p>Volcano plots depicting the fold difference in gene expression levels after consumption of LGG fo...
<p>Points in red indicate significance at an FDR of 10%. Points with a mean counts below the dashed ...
Expression data of genes are plotted as log2 fold change versus -log10 FDR corrected p-value. Red do...