The maximum likelihood tree inferred from "PHOT_alignment.fas", using nhPhyML. The analysis was carried out with ten discrete categories of GC equilibrium frequencies, and the required starting tree was the best tree from the Garli analysis ("PHOT_ML_tree_garli.tre"). Alphanumeric codes following species names are the four-letter 1KP transcriptome identifiers, Genbank accessions or both
The maximum likelihood bootstrapping trees from "NEO_alignment.fas", using RAxML (1000 replicates; f...
The maximum likelihood bootstrapping trees from "NEO_alignment.fas", using RAxML (1000 replicates; t...
The maximum likelihood bootstrapping trees from "NEO_alignment.fas", using RAxML (1000 replicates). ...
The maximum likelihood bootstrapping trees from "PHOT_alignment.fas", using nhPhyML (1000 replicates...
The maximum likelihood tree inferred from "PHOT_alignment.fas", using Garli with genthreshfortopoter...
The maximum likelihood tree inferred from "PHOT_alignment.fas", using CodonPhyML. We used the GY mod...
The maximum likelihood tree inferred from "PHY_alignment.fas", using CodonPhyML. We used the GY mode...
The maximum likelihood tree inferred from "NEO_alignment.fas" (first and second codon excluded), usi...
The maximum likelihood tree inferred from "NEO_alignment.fas" (third codon excluded), using Garli wi...
The maximum likelihood tree inferred from "NEO_alignment.fas", using CodonPhyML. We used the GY mode...
The maximum likelihood tree inferred from "NEO_alignment.fas", using Garli with genthreshfortopoterm...
The 50% majority consensus tree from MrBayes run (25% of the total generations were discarded as bur...
The 50% majority consensus tree from MrBayes run (25% of the total generations were discarded as bur...
The maximum likelihood bootstrapping trees from "PHY_alignment.fas" (translated into amino acids), u...
The maximum likelihood tree inferred from "IGPD_alignment.fas", using RAxML with 100 random starting...
The maximum likelihood bootstrapping trees from "NEO_alignment.fas", using RAxML (1000 replicates; f...
The maximum likelihood bootstrapping trees from "NEO_alignment.fas", using RAxML (1000 replicates; t...
The maximum likelihood bootstrapping trees from "NEO_alignment.fas", using RAxML (1000 replicates). ...
The maximum likelihood bootstrapping trees from "PHOT_alignment.fas", using nhPhyML (1000 replicates...
The maximum likelihood tree inferred from "PHOT_alignment.fas", using Garli with genthreshfortopoter...
The maximum likelihood tree inferred from "PHOT_alignment.fas", using CodonPhyML. We used the GY mod...
The maximum likelihood tree inferred from "PHY_alignment.fas", using CodonPhyML. We used the GY mode...
The maximum likelihood tree inferred from "NEO_alignment.fas" (first and second codon excluded), usi...
The maximum likelihood tree inferred from "NEO_alignment.fas" (third codon excluded), using Garli wi...
The maximum likelihood tree inferred from "NEO_alignment.fas", using CodonPhyML. We used the GY mode...
The maximum likelihood tree inferred from "NEO_alignment.fas", using Garli with genthreshfortopoterm...
The 50% majority consensus tree from MrBayes run (25% of the total generations were discarded as bur...
The 50% majority consensus tree from MrBayes run (25% of the total generations were discarded as bur...
The maximum likelihood bootstrapping trees from "PHY_alignment.fas" (translated into amino acids), u...
The maximum likelihood tree inferred from "IGPD_alignment.fas", using RAxML with 100 random starting...
The maximum likelihood bootstrapping trees from "NEO_alignment.fas", using RAxML (1000 replicates; f...
The maximum likelihood bootstrapping trees from "NEO_alignment.fas", using RAxML (1000 replicates; t...
The maximum likelihood bootstrapping trees from "NEO_alignment.fas", using RAxML (1000 replicates). ...
DOI
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