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Significant marker-trait associations (MTAs) identified for different traits

Mahendar Thudi (196121)
Hari D. Upadhyaya (118396)
Abhishek Rathore (560197)
Pooran Mal Gaur (560198)
Lakshmanan Krishnamurthy (560199)
Manish Roorkiwal (560200)
Spurthi N. Nayak (196132)
Sushil Kumar Chaturvedi (560201)
Partha Sarathi Basu (560202)
N. V. P. R. Gangarao (560203)
Asnake Fikre (560204)
Paul Kimurto (522139)
Prakash C. Sharma (560205)
M. S. Sheshashayee (560206)
Satoshi Tobita (560207)
Junichi Kashiwagi (560208)
Osamu Ito (560209)
Andrzej Killian (560210)
Rajeev Kumar Varshney (560211)

Publication date

May 2014

DOI

10.1371/journal.pone.0096758.t001

Abstract

<p>Significant marker-trait associations (MTAs) identified for different traits</p

Extracted data

Related items

Associations between demographics and sports characteristics and MT classes.

Joanna S. Zeiger (4884898)
Robert S. Zeiger (153151)

February 2018

<p>Associations between demographics and sports characteristics and MT classes.</p

Association of trait response, where G×E was supported or suggested, and multivariate environmental parameters at provenance site of origin.

Shannon Dillon (610335)
Audrey Quentin (4729674)
Milos Ivković (4729671)
Robert T. Furbank (54108)
Elizabeth Pinkard (4729677)

January 2018

<p>Association of trait response, where G×E was supported or suggested, and multivariate environment...

Shared and unique marker trait associations among different stress treatments.

Mirza Faisal Qaseem (4423240)
Rahmatullah Qureshi (5460134)
Quddoos H. Muqaddasi (3169200)
Humaira Shaheen (3743302)
Rehana Kousar (5460131)
Marion S. Röder (381431)

June 2018

<p>Number represent number of associations common between two or more than two treatments.</p

Significant marker-trait associations (MTAs) identified using MLMM (Multi-Locus Mixed Model).

Divya Sharma (1751311)
Apoorv Tiwari (5616683)
Salej Sood (5616686)
Gautam Jamra (5616689)
N. K. Singh (499702)
Prabina Kumar Meher (3149415)
Anil Kumar (105720)

August 2018

<p>Significant marker-trait associations (MTAs) identified using MLMM (Multi-Locus Mixed Model).</p

Allelic effect of selected marker-trait associations (MTAs) with ≥20% phenotypic variance for 15 traits.

Manish K. Pandey (151068)
Hari D. Upadhyaya (118396)
Abhishek Rathore (560197)
Vincent Vadez (619039)
M. S. Sheshshayee (619040)
Manda Sriswathi (619041)
Mansee Govil (619042)
Ashish Kumar (152984)
M. V. C. Gowda (619043)
Shivali Sharma (619044)
Falalou Hamidou (619045)
V. Anil Kumar (619046)
Pawan Khera (619047)
Ramesh S. Bhat (619048)
Aamir W. Khan (619049)
Sube Singh (619050)
Hongjie Li (82868)
Emmanuel Monyo (619051)
H. L. Nadaf (619052)
Ganapati Mukri (619054)
Scott A. Jackson (123805)
Baozhu Guo (42084)
Xuanqiang Liang (42087)
Rajeev K. Varshney (151116)

August 2014

<p>Allelic effect of selected marker-trait associations (MTAs) with ≥20% phenotypic variance for 15 ...

Most significant, yield-related and other marker-trait associations and variation explained.

Frances L. Bekele (13919717)
Gillian G. Bidaisee (13919720)
Mathilde Allegre (13919723)
Xavier Argout (68581)
Olivier Fouet (121913)
Michel Boccara (121919)
Duraisamy Saravanakumar (13919726)
Isaac Bekele (13919729)
Claire Lanaud (121926)

October 2022

Most significant, yield-related and other marker-trait associations and variation explained.</p

Significant marker-trait associations identified by the GCTA leave-one-chromosome-out method.

Brian P. Ward (2329996)
Gina Brown-Guedira (636778)
Frederic L. Kolb (393370)
David A. Van Sanford (6391829)
Priyanka Tyagi (3961991)
Clay H. Sneller (6391832)
Carl A. Griffey (1812652)

February 2019

Significant marker-trait associations identified by the GCTA leave-one-chromosome-out method.</p

Significant marker-to-trait influences based on a subset of markers in combined analysis of pleiotropy and epitasis.

Silvano O. Assanga (4710159)
Maria Fuentealba (4710156)
Guorong Zhang (3139737)
ChorTee Tan (4710153)
Smit Dhakal (4710154)
Jackie C. Rudd (4710155)
Amir M. H. Ibrahim (4242814)
Qingwu Xue (2622400)
Scott Haley (4710157)
Jianli Chen (1976941)
Shiaoman Chao (393351)
Jason Baker (4117303)
Kirk Jessup (4710158)
Shuyu Liu (4710160)

December 2017

<p>Significant marker-to-trait influences based on a subset of markers in combined analysis of pleio...

Number of SNP marker-trait associations in different years for the examined traits.

Sisi Huang (760857)
Longqing Sun (5185931)
Xin Hu (38924)
Yanhong Wang (305822)
Yujuan Zhang (621802)
Eviatar Nevo (55671)
Junhua Peng (334565)
Dongfa Sun (198916)

October 2018

Number of SNP marker-trait associations in different years for the examined traits.</p

Lists of DArT markers with a significant marker-trait association using different model (k and Q+k methods) and within subgroups.

Shengguan Cai (278642)
Dezhi Wu (211843)
Zahra Jabeen (437983)
Yuqing Huang (153028)
Yechang Huang (437984)
Guoping Zhang (211879)

July 2013

<p>Lists of DArT markers with a significant marker-trait association using different model (k and Q+...

Sensitivity and specificity of ASSET, BE, and CPASSOC for predicting trait-specific association.

Zhaozhong Zhu (551360)
Verneri Anttila (114354)
Jordan W. Smoller (236500)
Phil H. Lee (441591)

March 2018

<p>Sensitivity and specificity of ASSET, BE, and CPASSOC for predicting trait-specific association.<...

Association between participants who were found to have MetS and their characteristics (n = 512).

Abdelmoneim Ismail Awad (687285)
Fatemah Mohammad Alsaleh (687286)

January 2015

<p>Association between participants who were found to have MetS and their characteristics (n = 512)....

Thresholds of cork quality traits used for the association study with MSAP markers.

Vera Inácio (571949)
Pedro M. Barros (3611231)
Augusta Costa (733374)
Cristóvão Roussado (3611225)
Elsa Gonçalves (3410198)
Rita Costa (51920)
José Graça (3611228)
M. Margarida Oliveira (733812)
Leonor Morais-Cecílio (571950)

January 2017

<p>Thresholds of cork quality traits used for the association study with MSAP markers.</p

Summary of trait-marker associations within the three Panels.

Peng Zhang (2071)
Xiangdong Liu (79858)
Hanhua Tong (652609)
Yonggen Lu (193842)
Jinquan Li (112721)

October 2014

<p>Note:</p>(1)<p>Number of the same trait-marker associations using MLM found both in Panel 1 and P...

Significant and suggestive association results from meta-analysis of cranial vault traits.

Jasmien Roosenboom (5146133)
Myoung Keun Lee (3080544)
Jacqueline T. Hecht (365415)
Carrie L. Heike (3080520)
George L. Wehby (534873)
Kaare Christensen (75575)
Eleanor Feingold (10018)
Mary L. Marazita (134605)
A. Murat Maga (206516)
John R. Shaffer (206255)
Seth M. Weinberg (435939)

April 2018

<p>Significant and suggestive association results from meta-analysis of cranial vault traits.</p

Associations between demographics and sports characteristics and MT classes.

Joanna S. Zeiger (4884898)
Robert S. Zeiger (153151)

February 2018

<p>Associations between demographics and sports characteristics and MT classes.</p

Association of trait response, where G×E was supported or suggested, and multivariate environmental parameters at provenance site of origin.

Shannon Dillon (610335)
Audrey Quentin (4729674)
Milos Ivković (4729671)
Robert T. Furbank (54108)
Elizabeth Pinkard (4729677)

January 2018

<p>Association of trait response, where G×E was supported or suggested, and multivariate environment...

Shared and unique marker trait associations among different stress treatments.

Mirza Faisal Qaseem (4423240)
Rahmatullah Qureshi (5460134)
Quddoos H. Muqaddasi (3169200)
Humaira Shaheen (3743302)
Rehana Kousar (5460131)
Marion S. Röder (381431)

June 2018

<p>Number represent number of associations common between two or more than two treatments.</p

Significant marker-trait associations (MTAs) identified using MLMM (Multi-Locus Mixed Model).

Divya Sharma (1751311)
Apoorv Tiwari (5616683)
Salej Sood (5616686)
Gautam Jamra (5616689)
N. K. Singh (499702)
Prabina Kumar Meher (3149415)
Anil Kumar (105720)

August 2018

<p>Significant marker-trait associations (MTAs) identified using MLMM (Multi-Locus Mixed Model).</p

Allelic effect of selected marker-trait associations (MTAs) with ≥20% phenotypic variance for 15 traits.

Manish K. Pandey (151068)
Hari D. Upadhyaya (118396)
Abhishek Rathore (560197)
Vincent Vadez (619039)
M. S. Sheshshayee (619040)
Manda Sriswathi (619041)
Mansee Govil (619042)
Ashish Kumar (152984)
M. V. C. Gowda (619043)
Shivali Sharma (619044)
Falalou Hamidou (619045)
V. Anil Kumar (619046)
Pawan Khera (619047)
Ramesh S. Bhat (619048)
Aamir W. Khan (619049)
Sube Singh (619050)
Hongjie Li (82868)
Emmanuel Monyo (619051)
H. L. Nadaf (619052)
Ganapati Mukri (619054)
Scott A. Jackson (123805)
Baozhu Guo (42084)
Xuanqiang Liang (42087)
Rajeev K. Varshney (151116)

August 2014

<p>Allelic effect of selected marker-trait associations (MTAs) with ≥20% phenotypic variance for 15 ...

Most significant, yield-related and other marker-trait associations and variation explained.

Frances L. Bekele (13919717)
Gillian G. Bidaisee (13919720)
Mathilde Allegre (13919723)
Xavier Argout (68581)
Olivier Fouet (121913)
Michel Boccara (121919)
Duraisamy Saravanakumar (13919726)
Isaac Bekele (13919729)
Claire Lanaud (121926)

October 2022

Most significant, yield-related and other marker-trait associations and variation explained.</p

Significant marker-trait associations identified by the GCTA leave-one-chromosome-out method.

Brian P. Ward (2329996)
Gina Brown-Guedira (636778)
Frederic L. Kolb (393370)
David A. Van Sanford (6391829)
Priyanka Tyagi (3961991)
Clay H. Sneller (6391832)
Carl A. Griffey (1812652)

February 2019

Significant marker-trait associations identified by the GCTA leave-one-chromosome-out method.</p

Significant marker-to-trait influences based on a subset of markers in combined analysis of pleiotropy and epitasis.

Silvano O. Assanga (4710159)
Maria Fuentealba (4710156)
Guorong Zhang (3139737)
ChorTee Tan (4710153)
Smit Dhakal (4710154)
Jackie C. Rudd (4710155)
Amir M. H. Ibrahim (4242814)
Qingwu Xue (2622400)
Scott Haley (4710157)
Jianli Chen (1976941)
Shiaoman Chao (393351)
Jason Baker (4117303)
Kirk Jessup (4710158)
Shuyu Liu (4710160)

December 2017

<p>Significant marker-to-trait influences based on a subset of markers in combined analysis of pleio...

Number of SNP marker-trait associations in different years for the examined traits.

Sisi Huang (760857)
Longqing Sun (5185931)
Xin Hu (38924)
Yanhong Wang (305822)
Yujuan Zhang (621802)
Eviatar Nevo (55671)
Junhua Peng (334565)
Dongfa Sun (198916)

October 2018

Number of SNP marker-trait associations in different years for the examined traits.</p

Lists of DArT markers with a significant marker-trait association using different model (k and Q+k methods) and within subgroups.

Shengguan Cai (278642)
Dezhi Wu (211843)
Zahra Jabeen (437983)
Yuqing Huang (153028)
Yechang Huang (437984)
Guoping Zhang (211879)

July 2013

<p>Lists of DArT markers with a significant marker-trait association using different model (k and Q+...

Sensitivity and specificity of ASSET, BE, and CPASSOC for predicting trait-specific association.

Zhaozhong Zhu (551360)
Verneri Anttila (114354)
Jordan W. Smoller (236500)
Phil H. Lee (441591)

March 2018

<p>Sensitivity and specificity of ASSET, BE, and CPASSOC for predicting trait-specific association.<...

Association between participants who were found to have MetS and their characteristics (n = 512).

Abdelmoneim Ismail Awad (687285)
Fatemah Mohammad Alsaleh (687286)

January 2015

<p>Association between participants who were found to have MetS and their characteristics (n = 512)....

Thresholds of cork quality traits used for the association study with MSAP markers.

Vera Inácio (571949)
Pedro M. Barros (3611231)
Augusta Costa (733374)
Cristóvão Roussado (3611225)
Elsa Gonçalves (3410198)
Rita Costa (51920)
José Graça (3611228)
M. Margarida Oliveira (733812)
Leonor Morais-Cecílio (571950)

January 2017

<p>Thresholds of cork quality traits used for the association study with MSAP markers.</p

Summary of trait-marker associations within the three Panels.

Peng Zhang (2071)
Xiangdong Liu (79858)
Hanhua Tong (652609)
Yonggen Lu (193842)
Jinquan Li (112721)

October 2014

<p>Note:</p>(1)<p>Number of the same trait-marker associations using MLM found both in Panel 1 and P...

Significant and suggestive association results from meta-analysis of cranial vault traits.

Jasmien Roosenboom (5146133)
Myoung Keun Lee (3080544)
Jacqueline T. Hecht (365415)
Carrie L. Heike (3080520)
George L. Wehby (534873)
Kaare Christensen (75575)
Eleanor Feingold (10018)
Mary L. Marazita (134605)
A. Murat Maga (206516)
John R. Shaffer (206255)
Seth M. Weinberg (435939)

April 2018

<p>Significant and suggestive association results from meta-analysis of cranial vault traits.</p

Associations between demographics and sports characteristics and MT classes.

Joanna S. Zeiger (4884898)
Robert S. Zeiger (153151)

February 2018

<p>Associations between demographics and sports characteristics and MT classes.</p

Association of trait response, where G×E was supported or suggested, and multivariate environmental parameters at provenance site of origin.

Shannon Dillon (610335)
Audrey Quentin (4729674)
Milos Ivković (4729671)
Robert T. Furbank (54108)
Elizabeth Pinkard (4729677)

January 2018

<p>Association of trait response, where G×E was supported or suggested, and multivariate environment...

Shared and unique marker trait associations among different stress treatments.

Mirza Faisal Qaseem (4423240)
Rahmatullah Qureshi (5460134)
Quddoos H. Muqaddasi (3169200)
Humaira Shaheen (3743302)
Rehana Kousar (5460131)
Marion S. Röder (381431)

June 2018

<p>Number represent number of associations common between two or more than two treatments.</p