<p>The proportion of sequences with matches (e-value cut off 1e-05) in NCBI embryophytes nr database is greater among longer assembled transcripts.</p
<p>a) Number of records in the sedimentary eDNA in relation to vegetation survey distance. b) Percen...
Lowest percentage of sequence identity below which the comparison against the NCBI nt database did n...
One of the most common ways to search a sequence database for sequences that are similar to a query ...
<p>The proportion of sequences with matches in NCBI nr databases is greater among the longer assembl...
<p>The proportion of sequences with matches (with a cut-off E-value of 1.0E-5) in nr database is gre...
<p>(A) Singleton sequences. (B) Cluster sequences. The proportion of sequences with matches (with a ...
<p>Effect of query unigene length on the numbers of matched unigenes and the percentage of unigenes ...
<p>The x-axis indicates sequence sizes from 200 nt to≥3000 nt. The y-axis indicates the number of un...
*<p>Query coverage is percentage of the query length that is included in the aligned segments.</p>*<...
<p>(A) The counts of genes and isoforms assembled decreases along with length. The length of genes a...
MOTIVATION: Database search programs such as FASTA, BLAST or a rigorous Smith-Waterman algorithm pr...
<p>(A) E-value distribution of BLAST hits for each distinct sequence with a cut-off E-value of 10<su...
Word matches are widely used to compare DNA sequences, especially when the compared sequences are to...
The computational power needed for searching exponentially growing databases, such as GenBank, has i...
<p>A) E-value distribution of the top BLASTx hits with a cut-off E-value of 1e-05. B) Similarity dis...
<p>a) Number of records in the sedimentary eDNA in relation to vegetation survey distance. b) Percen...
Lowest percentage of sequence identity below which the comparison against the NCBI nt database did n...
One of the most common ways to search a sequence database for sequences that are similar to a query ...
<p>The proportion of sequences with matches in NCBI nr databases is greater among the longer assembl...
<p>The proportion of sequences with matches (with a cut-off E-value of 1.0E-5) in nr database is gre...
<p>(A) Singleton sequences. (B) Cluster sequences. The proportion of sequences with matches (with a ...
<p>Effect of query unigene length on the numbers of matched unigenes and the percentage of unigenes ...
<p>The x-axis indicates sequence sizes from 200 nt to≥3000 nt. The y-axis indicates the number of un...
*<p>Query coverage is percentage of the query length that is included in the aligned segments.</p>*<...
<p>(A) The counts of genes and isoforms assembled decreases along with length. The length of genes a...
MOTIVATION: Database search programs such as FASTA, BLAST or a rigorous Smith-Waterman algorithm pr...
<p>(A) E-value distribution of BLAST hits for each distinct sequence with a cut-off E-value of 10<su...
Word matches are widely used to compare DNA sequences, especially when the compared sequences are to...
The computational power needed for searching exponentially growing databases, such as GenBank, has i...
<p>A) E-value distribution of the top BLASTx hits with a cut-off E-value of 1e-05. B) Similarity dis...
<p>a) Number of records in the sedimentary eDNA in relation to vegetation survey distance. b) Percen...
Lowest percentage of sequence identity below which the comparison against the NCBI nt database did n...
One of the most common ways to search a sequence database for sequences that are similar to a query ...
DOI
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