<p>We developed a new hybrid model for efficient modeling of complete vesicles with molecular detail. Combining elements of Brownian dynamics (BD) and dynamic density functional theory (DDFT), we reduce the computational load of an existing coarse grained particle-based dissipative particle dynamics (DPD) model by representing the solvent as a continuum variable or a field, in a consistent manner. Both particle and field representations are spatially unrestricted and there is no need to treat boundaries explicitly. We focus on developing a general framework for deriving the parameters in this hybrid approach from existing DPD representations, and validate this new method via a comparison to DPD results. In addition, we consider a few proof ...
The aim of the task was to investigate lipid self-assembly when using coarse-grain molecular dynamic...
Despite the central role of lipids in many biophysical functions, the molecular mechanisms that dict...
A simplified particle-based computer model for hydrated phospholipid bilayers has been developed and...
This paper gives an overview of the coarse-grained models of phospholipids recently developed by the...
In the framework of a recently developed scheme for a hybrid particle-field simulation technique whe...
The basic mechanisms of living cells have attracted an increased interest in recent years, triggered...
In the framework of a recently developed scheme for a hybrid particle-field simulation technique whe...
A new set of efficient solvent-free dissipative particle dynamics (DPD) force fields was developed f...
We present a systematic methodology to develop highly coarse-grained (CG) lipid models for large sca...
Cellular membranes are fundamental constituents of living organisms. Apart from defining the boundar...
We present a novel coarse-grained model with high computational efficiency for simulating a variety ...
In this article, a new set of parameters compatible with the dissipative particle dynamics (DPD) for...
The coarse-grained molecular dynamics (CGMD) or Brownian dynamics (BD) simulation is a particle-base...
We have extended an existing hybrid MD-SCF simulation technique that employs a coarsening step to en...
All-atomistic (AA) and coarse-grain (CG) simulations have been successfully applied to investigate a...
The aim of the task was to investigate lipid self-assembly when using coarse-grain molecular dynamic...
Despite the central role of lipids in many biophysical functions, the molecular mechanisms that dict...
A simplified particle-based computer model for hydrated phospholipid bilayers has been developed and...
This paper gives an overview of the coarse-grained models of phospholipids recently developed by the...
In the framework of a recently developed scheme for a hybrid particle-field simulation technique whe...
The basic mechanisms of living cells have attracted an increased interest in recent years, triggered...
In the framework of a recently developed scheme for a hybrid particle-field simulation technique whe...
A new set of efficient solvent-free dissipative particle dynamics (DPD) force fields was developed f...
We present a systematic methodology to develop highly coarse-grained (CG) lipid models for large sca...
Cellular membranes are fundamental constituents of living organisms. Apart from defining the boundar...
We present a novel coarse-grained model with high computational efficiency for simulating a variety ...
In this article, a new set of parameters compatible with the dissipative particle dynamics (DPD) for...
The coarse-grained molecular dynamics (CGMD) or Brownian dynamics (BD) simulation is a particle-base...
We have extended an existing hybrid MD-SCF simulation technique that employs a coarsening step to en...
All-atomistic (AA) and coarse-grain (CG) simulations have been successfully applied to investigate a...
The aim of the task was to investigate lipid self-assembly when using coarse-grain molecular dynamic...
Despite the central role of lipids in many biophysical functions, the molecular mechanisms that dict...
A simplified particle-based computer model for hydrated phospholipid bilayers has been developed and...