<p>Tree for 108 genomes based on a 2.93-Mbp alignment, rooted at the midpoint of the outgroup (Ecl/Yre) branch. Nodes with <30% bootstrap support were combined forming the multifurcated dashed line; otherwise support values are shown only when <100%. Brackets: Kpn multilocus sequence type (ST). Inset: enlargement of the “core Kpn” phylogeny. Kpn2146 falls in a clade containing fellow ST11 strains Kpn JM45 and Kpn HS11286 and a tight clade (circled) of ST258 and ST512 strains. The ST258/ST512 clade is heavily sequenced, and represented here with only five of its most diverse members. Bold: complete genomes used for phyloblocks analysis. Species name abbreviations: Kpn, <i>K. pneumoniae</i>; Ksp, <i>K. sp</i>.; Kpl, <i>K. cf. planticola</i>; ...
<p>Bootstrap value (100 resamplings) are shown on tree nodes where support ≥50%. Number of genomes p...
The tree includes all strains of S. pneumoniae, S. pseudopneumoniae, S. mitis, including the experim...
<p>Phylogenetic relationships based on concatenated sequences of 7-locus MLST scheme (3,102 bp) for ...
<p><b>A</b>: Radial phylogenetic tree of 139 isolates based on the concatenated sequences of seven M...
<p>Shaded isolates the ST25 case isolates. There were a total of 195803 SNP positions in the final d...
<p>We constructed a tree that included our isolates, those described as <i>K</i>. <i>pneumoniae</i> ...
<p>We constructed a tree that included our isolate and type strains of 22 species of <i>Pantoea</i> ...
International audienceBackground: Various methods are currently used to define species and are based...
ABSTRACT Carbapenem-resistant Enterobacteriaceae (CRE), especially Klebsiella pneumoniae carbapenema...
Sublineages within microbial species can differ widely in their ecology and pathogenicity, and their...
<p>(A) A MEGAN tree, based on the output of BLASTX against the NCBI-nr database (E-value <10<sup>−3<...
<p>These novel phylotypes exhibited sequence similarities of less than 98% to known bacteria availab...
<p>The tree was constructed using the maximum likelihood method. The phylogenetically distinct clust...
Abstract Sublineages within microbial species can differ widely in their ecology and pathogenicity,...
The Klebsiella pneumoniae complex is comprised of ubiquitous bacteria that can be found in soils, pl...
<p>Bootstrap value (100 resamplings) are shown on tree nodes where support ≥50%. Number of genomes p...
The tree includes all strains of S. pneumoniae, S. pseudopneumoniae, S. mitis, including the experim...
<p>Phylogenetic relationships based on concatenated sequences of 7-locus MLST scheme (3,102 bp) for ...
<p><b>A</b>: Radial phylogenetic tree of 139 isolates based on the concatenated sequences of seven M...
<p>Shaded isolates the ST25 case isolates. There were a total of 195803 SNP positions in the final d...
<p>We constructed a tree that included our isolates, those described as <i>K</i>. <i>pneumoniae</i> ...
<p>We constructed a tree that included our isolate and type strains of 22 species of <i>Pantoea</i> ...
International audienceBackground: Various methods are currently used to define species and are based...
ABSTRACT Carbapenem-resistant Enterobacteriaceae (CRE), especially Klebsiella pneumoniae carbapenema...
Sublineages within microbial species can differ widely in their ecology and pathogenicity, and their...
<p>(A) A MEGAN tree, based on the output of BLASTX against the NCBI-nr database (E-value <10<sup>−3<...
<p>These novel phylotypes exhibited sequence similarities of less than 98% to known bacteria availab...
<p>The tree was constructed using the maximum likelihood method. The phylogenetically distinct clust...
Abstract Sublineages within microbial species can differ widely in their ecology and pathogenicity,...
The Klebsiella pneumoniae complex is comprised of ubiquitous bacteria that can be found in soils, pl...
<p>Bootstrap value (100 resamplings) are shown on tree nodes where support ≥50%. Number of genomes p...
The tree includes all strains of S. pneumoniae, S. pseudopneumoniae, S. mitis, including the experim...
<p>Phylogenetic relationships based on concatenated sequences of 7-locus MLST scheme (3,102 bp) for ...