<p>Gene set enrichment analysis <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0102625#pone.0102625-Subramanian1" target="_blank">[20]</a> profiles are shown for 10016 genes, rank-ordered by MIC score. Normalised Kolmogorov-Smirnov enrichment scores (NES) and false discovery rate q values (FDR) are shown. (A) using a gene set (n = 237) representing mRNAs that are significantly up-regulated in <i>Tis11/ZFP36</i>-knock-out mouse fibroblasts <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0102625#pone.0102625-Ishmael1" target="_blank">[21]</a>, (B) using a gene set (n = 152) representing mRNAs that display a significantly decreased rate of degradation in <i>Tis11/ZFP36</i>-deficient mouse fibroblast...
<p>(A) Schematic representation of primary screen and secondary validation screens using mouse embry...
<p>(A) Examples of a functionally informative DNA microarray data set and a non-informative one. Eac...
<p>Some of the most enriched human/zebrafish orthologous GSs of <a href="http://www.plosone.org/arti...
<p>Abbreviations: KO, <i>Tis11/ZFP36</i> knock-out mouse fibroblasts; NES, normalised enrichment sco...
<p>(A) Dot plot representing differentially expressed genes in NTKO and TKO cells from the microarra...
<p>(A) Genes up-regulated in the Z(2,3) ablated vs. Z(1,4) ablated comparisons are significantly enr...
*<p>The complete list is presented in <a href="http://www.plosone.org/article/info:doi/10.1371/journ...
<p>The 24 stem cell pluripotency maintenance genes regulated by the 35 transcription factors (TFs) w...
<p>*Genes listed were common to genome-wide gene expression analysis and target scan database, and b...
Abstract Background Gene-set analysis evaluates the expression of biological pathways, or a priori d...
Expression levels of mRNAs are among other factors regulated by microRNAs. A particular microRNA can...
<p><i>A</i>: Microarray data (GSE109882) unraveled a total of 301 transcripts significantly up or do...
<p>Enrichment of the DEG signatures (top 200 by FC from top 500 by p-values) for transcriptional fac...
<p>(A) Heat map expression profile of known ZFP36L1 target genes in terminal B cell differentiation....
<p>(<b>A</b>) Fold Change (FC) vs. Mean Expression Value (MEV) plot of knockout (KO) M1 vs. wild-typ...
<p>(A) Schematic representation of primary screen and secondary validation screens using mouse embry...
<p>(A) Examples of a functionally informative DNA microarray data set and a non-informative one. Eac...
<p>Some of the most enriched human/zebrafish orthologous GSs of <a href="http://www.plosone.org/arti...
<p>Abbreviations: KO, <i>Tis11/ZFP36</i> knock-out mouse fibroblasts; NES, normalised enrichment sco...
<p>(A) Dot plot representing differentially expressed genes in NTKO and TKO cells from the microarra...
<p>(A) Genes up-regulated in the Z(2,3) ablated vs. Z(1,4) ablated comparisons are significantly enr...
*<p>The complete list is presented in <a href="http://www.plosone.org/article/info:doi/10.1371/journ...
<p>The 24 stem cell pluripotency maintenance genes regulated by the 35 transcription factors (TFs) w...
<p>*Genes listed were common to genome-wide gene expression analysis and target scan database, and b...
Abstract Background Gene-set analysis evaluates the expression of biological pathways, or a priori d...
Expression levels of mRNAs are among other factors regulated by microRNAs. A particular microRNA can...
<p><i>A</i>: Microarray data (GSE109882) unraveled a total of 301 transcripts significantly up or do...
<p>Enrichment of the DEG signatures (top 200 by FC from top 500 by p-values) for transcriptional fac...
<p>(A) Heat map expression profile of known ZFP36L1 target genes in terminal B cell differentiation....
<p>(<b>A</b>) Fold Change (FC) vs. Mean Expression Value (MEV) plot of knockout (KO) M1 vs. wild-typ...
<p>(A) Schematic representation of primary screen and secondary validation screens using mouse embry...
<p>(A) Examples of a functionally informative DNA microarray data set and a non-informative one. Eac...
<p>Some of the most enriched human/zebrafish orthologous GSs of <a href="http://www.plosone.org/arti...