<p>: <b>A</b>. The RD median of the ORF's 3′ end RD profiles: the red/green bars represent the RD median of the <i>20%</i> of the genes with top/bottom half-life. B. Wilcoxon rank sum test between the ribosomal densities profiles of the genes from the top and bottom <i>20%</i> half-life for different functional genes groups. The x-axes represent the log (Wilcoxon test P-value) and the y-axes represent the functional genes group (see <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0102308#pone.0102308.s016" target="_blank">Table S5</a>). Red bars indicate the <i>P-value ≤0.05</i> whereas green bars indicate the <i>P-value >0.05</i>.</p
(A) Cell growth measured in 24-hour increments following RNAi to NIPBL and WAPL or a non-targeting s...
(A) Percentage of P-sites in the three frames (Periodicity score) along the 5’ UTR, CDS and 3’ UTR f...
<p>Panel (a) shows the distribution of the number of ribosomes on an mRNA chain of 1025 codons at tw...
<p>: <b>A</b>. The RD median of the ORF's 5′ end RD profiles: the red/green bars represent the RD me...
<p><b>A</b>. The first <i>600</i> nts; all genes are aligned to the ORF's 5′ end. <b>B</b>. The last...
<p><b>A</b>. The ORF's first <i>600</i> nts; genes are aligned to the ORF's 5′ end. <b>B</b>. The OR...
<p>Half-life distributions of the genes from the bottom <i>20%</i> RD (green curve), top <i>20%</i> ...
<p><b>(A)</b> Fraction of positions with detected missing mRPFs in genes, divded into 3 regions: fir...
<p>The RD were calculated as: 1) the number of ribosomes on the mRNA <a href="http://www.plosone.org...
<p>Genes with high relative post-ORF ribosome occupancy (RPOR) were individually analyzed to determi...
<p>(A), Comparison of the relative ribosome densities across uniformly (n = 533) and differentially ...
<p>(A) Bar graph showing POLR2B (dark blue), GTF2B (light blue), POLR3D (red), and BRF2 (orange) ChI...
<p>(A, B) The RFP coverage of a representative gene with low EVI (A) and high TR (B) in HeLa cells, ...
<p>Genes with a significant change in expression level between the WT and the SPL20 strain during th...
<p>(A) Genes of <i>M.m</i> were grouped according to their homologs in <i>M.tb</i>. Numbers on the x...
(A) Cell growth measured in 24-hour increments following RNAi to NIPBL and WAPL or a non-targeting s...
(A) Percentage of P-sites in the three frames (Periodicity score) along the 5’ UTR, CDS and 3’ UTR f...
<p>Panel (a) shows the distribution of the number of ribosomes on an mRNA chain of 1025 codons at tw...
<p>: <b>A</b>. The RD median of the ORF's 5′ end RD profiles: the red/green bars represent the RD me...
<p><b>A</b>. The first <i>600</i> nts; all genes are aligned to the ORF's 5′ end. <b>B</b>. The last...
<p><b>A</b>. The ORF's first <i>600</i> nts; genes are aligned to the ORF's 5′ end. <b>B</b>. The OR...
<p>Half-life distributions of the genes from the bottom <i>20%</i> RD (green curve), top <i>20%</i> ...
<p><b>(A)</b> Fraction of positions with detected missing mRPFs in genes, divded into 3 regions: fir...
<p>The RD were calculated as: 1) the number of ribosomes on the mRNA <a href="http://www.plosone.org...
<p>Genes with high relative post-ORF ribosome occupancy (RPOR) were individually analyzed to determi...
<p>(A), Comparison of the relative ribosome densities across uniformly (n = 533) and differentially ...
<p>(A) Bar graph showing POLR2B (dark blue), GTF2B (light blue), POLR3D (red), and BRF2 (orange) ChI...
<p>(A, B) The RFP coverage of a representative gene with low EVI (A) and high TR (B) in HeLa cells, ...
<p>Genes with a significant change in expression level between the WT and the SPL20 strain during th...
<p>(A) Genes of <i>M.m</i> were grouped according to their homologs in <i>M.tb</i>. Numbers on the x...
(A) Cell growth measured in 24-hour increments following RNAi to NIPBL and WAPL or a non-targeting s...
(A) Percentage of P-sites in the three frames (Periodicity score) along the 5’ UTR, CDS and 3’ UTR f...
<p>Panel (a) shows the distribution of the number of ribosomes on an mRNA chain of 1025 codons at tw...