<p>(A) The top-scoring KEGG (square) and GO-BP (circle) annotations for up- and down-regulated genes are shown. Down-regulated genes are colored green and are highly enriched for DNA replication, cell cycle and DNA repair. Up-regulated genes are colored red and relate primarily to development and metabolism. In both cases, more intensive color indicates greater fold-enrichment [ranges: (−1.36)–(−4.61); 1.57–4.84] and size reflects the number of genes identified (4–195). (B) DAVID <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0103292#pone.0103292-Huangda1" target="_blank">[11]</a>, <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0103292#pone.0103292-Huangda2" target="_blank">[12]</a>-identified K...
<p>(A) Genes involved in ecdysteroid (ECD) biosynthesis (green circles), ECD signaling (dark blue ci...
<p>(A) The most enriched GO terms targeted by the up regulated transcripts were involved in a variet...
<p>(A) Volcano plot of differentially expressed genes (solid black color indicates absolute logFC ≥ ...
<p>(A) Scenarios leading to imbalanced expression of causal genes and paralogs in the disease tissue...
<p>In total, 171 genes at 24 h after TDS (>1.6 fold change, q > 0.8) and 995 genes at 48 h after TDS...
<p>Differential gene expression was ranked by fold change. The most up-regulated genes are shown on ...
<p>(A) GO-slim biological process enrichment analysis of DEGs at least between two lines. Result sho...
<p><b>A</b>, A schematic representation of the 14 days hESC differentiation. <b>B</b>, An unsupervis...
<p>Asterisks indicate GO categories over-represented (FDR ≤ 0.05) among DEGs (blue) compared to the ...
<p>(A) SE38 group vs. PBS group. S95H_NS, S50H_NS and S96_H_NS belong to SE38 group; S32H_NS, S32H_2...
a<p>The first 10 biological categories of function are indicated and function annotation with a sign...
<p>(a) Schematic of hypothesis testing approach to identify genes with invariant expression (IE) fro...
<p>(a) Examples of differential expression analysis results for the genes <i>HCST</i> and <i>IRF4</i...
<p>(A) Hierarchical clustering and functions of 191 differentially expressed genes (DEGs). DEGs are ...
<p><b>A</b>, <b>Left panel</b>: Unsupervised hierarchical clustering of the single-cell transcriptom...
<p>(A) Genes involved in ecdysteroid (ECD) biosynthesis (green circles), ECD signaling (dark blue ci...
<p>(A) The most enriched GO terms targeted by the up regulated transcripts were involved in a variet...
<p>(A) Volcano plot of differentially expressed genes (solid black color indicates absolute logFC ≥ ...
<p>(A) Scenarios leading to imbalanced expression of causal genes and paralogs in the disease tissue...
<p>In total, 171 genes at 24 h after TDS (>1.6 fold change, q > 0.8) and 995 genes at 48 h after TDS...
<p>Differential gene expression was ranked by fold change. The most up-regulated genes are shown on ...
<p>(A) GO-slim biological process enrichment analysis of DEGs at least between two lines. Result sho...
<p><b>A</b>, A schematic representation of the 14 days hESC differentiation. <b>B</b>, An unsupervis...
<p>Asterisks indicate GO categories over-represented (FDR ≤ 0.05) among DEGs (blue) compared to the ...
<p>(A) SE38 group vs. PBS group. S95H_NS, S50H_NS and S96_H_NS belong to SE38 group; S32H_NS, S32H_2...
a<p>The first 10 biological categories of function are indicated and function annotation with a sign...
<p>(a) Schematic of hypothesis testing approach to identify genes with invariant expression (IE) fro...
<p>(a) Examples of differential expression analysis results for the genes <i>HCST</i> and <i>IRF4</i...
<p>(A) Hierarchical clustering and functions of 191 differentially expressed genes (DEGs). DEGs are ...
<p><b>A</b>, <b>Left panel</b>: Unsupervised hierarchical clustering of the single-cell transcriptom...
<p>(A) Genes involved in ecdysteroid (ECD) biosynthesis (green circles), ECD signaling (dark blue ci...
<p>(A) The most enriched GO terms targeted by the up regulated transcripts were involved in a variet...
<p>(A) Volcano plot of differentially expressed genes (solid black color indicates absolute logFC ≥ ...