Nucleotide sequence variations of LCR/E6 among HPV16 isolates.

HPV16 E6 polymorphism and physical state of viral genome in relation to the risk of cervical cancer in women from the south of Poland

Szostek, Slawa
Zawilinska, Barbara
Klimek, Malgorzata
Kosz-Vnenchak, Magdalena

January 2017

The aim of this study was to analyse the correlation between HPV16 E6 variants and the physical stat...

Sequence variations of HPV-18.

Mengjie Shen (381810)
Xianping Ding (381811)
Tianjun Li (381812)
Gangyi Chen (381813)
Xiao Zhou (122661)

February 2013

Sequence variations of HPV-18 E1, E2, E6, E7, L1 and L2 were based on the HPV-18 reference sequen...

Determination of human papillomavirus 16 physical status through E1/E6 and E2/E6 ratio analysis

Tsakogiannis, D.
Kyriakopoulou, Z.
Ruether, I. G. A.
Amoutzias, G. D.
Dimitriou, T. G.
Diamantidou, V.
Kotsovassilis, C.
Markoulatos, P.

January 2014

Human papillomavirus (HPV) 16 genome integration into the host chromosome is a crucial event during ...

Nucleotide sequence variations of LCR/E6 among HPV18 isolates.

Sonia Pérez (612955)
Ana Cid (612956)
Amparo Iñarrea (612957)
Mónica Pato (612958)
María José Lamas (612959)
Bárbara Couso (612960)
Margarita Gil (612961)
María Jesús Álvarez (612962)
Sonia Rey (612963)
Isabel López-Miragaya (612964)
Santiago Melón (276223)
María de Oña (276228)

August 2014

Position number refers to the HPV18 prototype sequence previously described <a href="http://www.p...

Nucleotide sequence variations of L1 among HPV16 isolates.

Sonia Pérez (612955)
Ana Cid (612956)
Amparo Iñarrea (612957)
Mónica Pato (612958)
María José Lamas (612959)
Bárbara Couso (612960)
Margarita Gil (612961)
María Jesús Álvarez (612962)
Sonia Rey (612963)
Isabel López-Miragaya (612964)
Santiago Melón (276223)
María de Oña (276228)

August 2014

Position number refers to the HPV 16 prototype sequence previously described. Asterisk indicates ...

Nucleotide sequence variability within the long control region (LCR) of human papillomavirus type 6 (HPV-6) molecular variants.

Caroline Measso do Bonfim (766557)
João Simão Sobrinho (766558)
Rodrigo Lacerda Nogueira (766559)
Daniel Salgado Kupper (766560)
Fabiana Cardoso Pereira Valera (146799)
Maurício Lacerda Nogueira (372639)
Luisa Lina Villa (94416)
Paula Rahal (6841)
Laura Sichero (766561)

July 2015

Genomic positions containing specific mutations are indicated vertically across the top. Genomic ...

Phylogenetic tree of the HPV16 isolates based on LCR/E6 sequences.

Sonia Pérez (612955)
Ana Cid (612956)
Amparo Iñarrea (612957)
Mónica Pato (612958)
María José Lamas (612959)
Bárbara Couso (612960)
Margarita Gil (612961)
María Jesús Álvarez (612962)
Sonia Rey (612963)
Isabel López-Miragaya (612964)
Santiago Melón (276223)
María de Oña (276228)

August 2014

Phylogenetic analysis confirmed the presence of the four lineages <a href="http://www.plosone.org...

Nucleotide sequence variations and amino acid changes within the E1 ORF of intact HPV16 isolates among the samples (non-malignant samples and CaCx cases) analysed.

Paramita Mandal (418576)
Bornali Bhattacharjee (137672)
Damayanti Das Ghosh (137668)
Nidhu Ranjan Mondal (418577)
Rahul Roy Chowdhury (137681)
Sudipta Roy (137684)
Sharmila Sengupta (137687)

June 2013

Nucleotide sequence variations and amino acid changes within the E1 ORF of intact HPV16 isolates ...

Positions of nucleotide and amino acid changes within the whole genome and E1 sequences of the major HPV16 variants containing the E1-1374∧63 duplication.

Ivan Sabol (148286)
Mihaela Matovina (148290)
Ali Si-Mohamed (148292)
Magdalena Grce (148295)

July 2012

anovel nucleotide changes are highlighted in bold and underlined.bchanges from the referen...

Geographical dependence of sequence variation in the E7 gene of human papillomavirus type 16

Daniel Eschle
Matthias Diirst
Jan Ter Meulen
Jeff Lu
Hans C. Eberhardt
Michael Pawlita I
Lutz Gissmann

January 1992

We have determined nucleotide sequences of the E7 open reading frame (ORF) of human papillomavirus t...

Identification of novel E6-E7 sequence variants of human papillomavirus 16

Tsakogiannis, D.
Kyriakopoulou, Z.
Amoutzias, G.
Ruether, I. G. A.
Dimitriou, T. G.
Panotopoulou, E.
Markoulatos, P.

January 2013

The rate of evolution of the human papillomavirus 16 (HPV16) genome is low. However, the ability of ...

HPV16 E6 is necessary for the stable maintenance of HPV16 as an extrachromosomal genome.

Laurel D. Lorenz (476549)
Jessenia Rivera Cardona (476550)
Paul F. Lambert (266676)

October 2013

Shown are HPV16-specific Southern analyses of total genomic DNA isolated from early (A and B, pas...

Evolution and Taxonomic Classification of Human Papillomavirus 16 (HPV16)-Related Variant Genomes: HPV31, HPV33, HPV35, HPV52, HPV58 and HPV67

Chen Zigui
Schiffman Mark
Herrero Rolando
DeSalle Rob
Anastos Kathryn
Segondy Michel
Sahasrabuddhe Vikrant V.
Gravitt Patti E.
Hsing Ann W.
Burk Robert D.

May 2011

genus contains HPV16, HPV31, HPV33, HPV35, HPV52, HPV58 and HPV67. These HPVs account for 75% of in...

Nucleotide polymorphisms of the human papillomavirus 16 E1 gene

Tsakogiannis, D.
Darmis, F.
Gortsilas, P.
Ruether, I. G. A.
Kyriakopoulou, Z.
Dimitriou, T. G.
Amoutzias, G.
Markoulatos, P.

January 2014

The E1 ORF is one of the most conserved regions in the human papillomavirus (HPV) genome. The comple...

Human papillomavirus type 18 variant lineages in United States populations characterized by sequence analysis of LCR-E6, E2, and L1regions

Arias-Pulido, Hugo
Peyton, Cheri L.
Torrez-Martínez, Norah
Anderson, D. Nelson
Wheeler, Cosette M.

July 2005

AbstractWhile HPV 16 variant lineages have been well characterized, the knowledge about HPV 18 varia...

HPV16 E6 polymorphism and physical state of viral genome in relation to the risk of cervical cancer in women from the south of Poland

Szostek, Slawa
Zawilinska, Barbara
Klimek, Malgorzata
Kosz-Vnenchak, Magdalena

January 2017

The aim of this study was to analyse the correlation between HPV16 E6 variants and the physical stat...

Sequence variations of HPV-18.

Mengjie Shen (381810)
Xianping Ding (381811)
Tianjun Li (381812)
Gangyi Chen (381813)
Xiao Zhou (122661)

February 2013

Sequence variations of HPV-18 E1, E2, E6, E7, L1 and L2 were based on the HPV-18 reference sequen...

Determination of human papillomavirus 16 physical status through E1/E6 and E2/E6 ratio analysis

Tsakogiannis, D.
Kyriakopoulou, Z.
Ruether, I. G. A.
Amoutzias, G. D.
Dimitriou, T. G.
Diamantidou, V.
Kotsovassilis, C.
Markoulatos, P.

January 2014

Human papillomavirus (HPV) 16 genome integration into the host chromosome is a crucial event during ...

Nucleotide sequence variations of LCR/E6 among HPV18 isolates.

Sonia Pérez (612955)
Ana Cid (612956)
Amparo Iñarrea (612957)
Mónica Pato (612958)
María José Lamas (612959)
Bárbara Couso (612960)
Margarita Gil (612961)
María Jesús Álvarez (612962)
Sonia Rey (612963)
Isabel López-Miragaya (612964)
Santiago Melón (276223)
María de Oña (276228)

August 2014

Position number refers to the HPV18 prototype sequence previously described <a href="http://www.p...

Nucleotide sequence variations of L1 among HPV16 isolates.

Sonia Pérez (612955)
Ana Cid (612956)
Amparo Iñarrea (612957)
Mónica Pato (612958)
María José Lamas (612959)
Bárbara Couso (612960)
Margarita Gil (612961)
María Jesús Álvarez (612962)
Sonia Rey (612963)
Isabel López-Miragaya (612964)
Santiago Melón (276223)
María de Oña (276228)

August 2014

Position number refers to the HPV 16 prototype sequence previously described. Asterisk indicates ...

Nucleotide sequence variability within the long control region (LCR) of human papillomavirus type 6 (HPV-6) molecular variants.

Caroline Measso do Bonfim (766557)
João Simão Sobrinho (766558)
Rodrigo Lacerda Nogueira (766559)
Daniel Salgado Kupper (766560)
Fabiana Cardoso Pereira Valera (146799)
Maurício Lacerda Nogueira (372639)
Luisa Lina Villa (94416)
Paula Rahal (6841)
Laura Sichero (766561)

July 2015

Genomic positions containing specific mutations are indicated vertically across the top. Genomic ...

Phylogenetic tree of the HPV16 isolates based on LCR/E6 sequences.

Sonia Pérez (612955)
Ana Cid (612956)
Amparo Iñarrea (612957)
Mónica Pato (612958)
María José Lamas (612959)
Bárbara Couso (612960)
Margarita Gil (612961)
María Jesús Álvarez (612962)
Sonia Rey (612963)
Isabel López-Miragaya (612964)
Santiago Melón (276223)
María de Oña (276228)

August 2014

Phylogenetic analysis confirmed the presence of the four lineages <a href="http://www.plosone.org...

Nucleotide sequence variations and amino acid changes within the E1 ORF of intact HPV16 isolates among the samples (non-malignant samples and CaCx cases) analysed.

Paramita Mandal (418576)
Bornali Bhattacharjee (137672)
Damayanti Das Ghosh (137668)
Nidhu Ranjan Mondal (418577)
Rahul Roy Chowdhury (137681)
Sudipta Roy (137684)
Sharmila Sengupta (137687)

June 2013

Nucleotide sequence variations and amino acid changes within the E1 ORF of intact HPV16 isolates ...

Positions of nucleotide and amino acid changes within the whole genome and E1 sequences of the major HPV16 variants containing the E1-1374∧63 duplication.

Ivan Sabol (148286)
Mihaela Matovina (148290)
Ali Si-Mohamed (148292)
Magdalena Grce (148295)

July 2012

anovel nucleotide changes are highlighted in bold and underlined.bchanges from the referen...

Geographical dependence of sequence variation in the E7 gene of human papillomavirus type 16

Daniel Eschle
Matthias Diirst
Jan Ter Meulen
Jeff Lu
Hans C. Eberhardt
Michael Pawlita I
Lutz Gissmann

January 1992

We have determined nucleotide sequences of the E7 open reading frame (ORF) of human papillomavirus t...

Identification of novel E6-E7 sequence variants of human papillomavirus 16

Tsakogiannis, D.
Kyriakopoulou, Z.
Amoutzias, G.
Ruether, I. G. A.
Dimitriou, T. G.
Panotopoulou, E.
Markoulatos, P.

January 2013

The rate of evolution of the human papillomavirus 16 (HPV16) genome is low. However, the ability of ...

HPV16 E6 is necessary for the stable maintenance of HPV16 as an extrachromosomal genome.

Laurel D. Lorenz (476549)
Jessenia Rivera Cardona (476550)
Paul F. Lambert (266676)

October 2013

Shown are HPV16-specific Southern analyses of total genomic DNA isolated from early (A and B, pas...

Evolution and Taxonomic Classification of Human Papillomavirus 16 (HPV16)-Related Variant Genomes: HPV31, HPV33, HPV35, HPV52, HPV58 and HPV67

Chen Zigui
Schiffman Mark
Herrero Rolando
DeSalle Rob
Anastos Kathryn
Segondy Michel
Sahasrabuddhe Vikrant V.
Gravitt Patti E.
Hsing Ann W.
Burk Robert D.

May 2011

genus contains HPV16, HPV31, HPV33, HPV35, HPV52, HPV58 and HPV67. These HPVs account for 75% of in...

Nucleotide polymorphisms of the human papillomavirus 16 E1 gene

Tsakogiannis, D.
Darmis, F.
Gortsilas, P.
Ruether, I. G. A.
Kyriakopoulou, Z.
Dimitriou, T. G.
Amoutzias, G.
Markoulatos, P.

January 2014

The E1 ORF is one of the most conserved regions in the human papillomavirus (HPV) genome. The comple...

Human papillomavirus type 18 variant lineages in United States populations characterized by sequence analysis of LCR-E6, E2, and L1regions

Arias-Pulido, Hugo
Peyton, Cheri L.
Torrez-Martínez, Norah
Anderson, D. Nelson
Wheeler, Cosette M.

July 2005

AbstractWhile HPV 16 variant lineages have been well characterized, the knowledge about HPV 18 varia...

HPV16 E6 polymorphism and physical state of viral genome in relation to the risk of cervical cancer in women from the south of Poland

Szostek, Slawa
Zawilinska, Barbara
Klimek, Malgorzata
Kosz-Vnenchak, Magdalena

January 2017

The aim of this study was to analyse the correlation between HPV16 E6 variants and the physical stat...

Sequence variations of HPV-18.

Mengjie Shen (381810)
Xianping Ding (381811)
Tianjun Li (381812)
Gangyi Chen (381813)
Xiao Zhou (122661)

February 2013

Sequence variations of HPV-18 E1, E2, E6, E7, L1 and L2 were based on the HPV-18 reference sequen...

Determination of human papillomavirus 16 physical status through E1/E6 and E2/E6 ratio analysis

Tsakogiannis, D.
Kyriakopoulou, Z.
Ruether, I. G. A.
Amoutzias, G. D.
Dimitriou, T. G.
Diamantidou, V.
Kotsovassilis, C.
Markoulatos, P.

January 2014

Human papillomavirus (HPV) 16 genome integration into the host chromosome is a crucial event during ...

Nucleotide sequence variations of LCR/E6 among HPV16 isolates.

Abstract

Extracted data

Nucleotide sequence variations of LCR/E6 among HPV16 isolates.

Abstract

Extracted data

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