Expression profiles and functional classification of the OsTGAP1 target genes.

<p>(A and B) Venn diagrams showing the overlap of genes that possess an OsTGAP1-binding regions within the 400-bp upstream region with the upregulated or downregulated genes in OsTGAP1-overexpressing rice cells. (C and D) Hierarchical clustering of the OsTGAP1 target genes using the cosine correlation and average linkage methods. WT and OX represent wild-type rice cells and OsTGAP1-overexpressing rice cells, respectively. Each column represents the mean of three biological replicates at each time point shown above the heat map. Colours represent induction (red) and repression (green), as indicated by the colour bar. The values of the heat maps are relative to those in the WT cells 0 h after the elicitor treatment. (E) Functional classification of the OsTGAP1 target genes. Categories are as follows: biosynthetic enzyme, defence response, transcription factor, protein kinase, transporter, other function, and unknown function.