Mouse genes detected by the Quantigene 2.0 Plex RNA Assay in distal colon homogenates of DSS-treated WT and TRPA1 KO mice.

Gene expression profiles of (A) TRPV1 receptor, sensory neuropeptides, such as (B) PACAP, (C) VIP, and their receptors (D) PAC1R, (E) VIPR1, (F) VIPR2, as well as another sensory neuropeptide (G) somatostatin and its receptors (H) SSTR1, (I) SSTR4, and tachykinins (J) TAC 1, (K) TAC 3, as well as their receptor NK1.

József Kun (635924)
István Szitter (635925)
Ágnes Kemény (635926)
Anikó Perkecz (635927)
László Kereskai (405369)
Krisztina Pohóczky (635928)
Áron Vincze (3308163)
Szilárd Gódi (635929)
Imre Szabó (635930)
János Szolcsányi (405371)
Erika Pintér (405370)
Zsuzsanna Helyes (405375)

September 2014

Gene expression was determined in the distal colon homogenates of water-treated non-inflamed wild...

RNA-Seq gene quantification and detection closely corresponds to values obtained by species-specific RT-qPCR.

James R. Bradford (19338)
Matthew Farren (423597)
Steve J. Powell (423598)
Sarah Runswick (423599)
Susie L. Weston (423600)
Helen Brown (423601)
Oona Delpuech (423602)
Mark Wappett (423603)
Neil R. Smith (423604)
T. Hedley Carr (423605)
Jonathan R. Dry (423606)
Neil J. Gibson (423607)
Simon T. Barry (423608)

June 2013

Comparison between RNA-Seq and RT-qPCR across 170 human and 174 mouse genes from a Calu-6 human x...

Tissue distribution of mRNA expression of Spint2 and membrane-bound serine proteases.

Nicolas Faller (550162)
Ivan Gautschi (57863)
Laurent Schild (57864)

April 2014

Quantitative RT-PCRs were performed on selected organs from three wild-type adult mice. From stom...

Colonic expression of mRNA for genes involved in inflammation and anti-inflammation.

Kenichiro Nishikawa (634477)
Naohiro Seo (611836)
Mie Torii (634478)
Nei Ma (634479)
Daisuke Muraoka (611837)
Isao Tawara (507264)
Masahiro Masuya (507263)
Kyosuke Tanaka (634480)
Yoshiyuki Takei (92839)
Hiroshi Shiku (190949)
Naoyuki Katayama (507269)
Takuma Kato (493431)

September 2014

IL-17KO mice and WT controls were treated with DSS as described in the legend for <a href="http:/...

Gene expression profiles of inflammatory cytokines, such as (A) TNF-alpha, (B) BLC, (C) M-CSF, (D) IL-1rn in the distal colon homogenates of water-treated non-inflamed wildtype (WT) and TRPA1-deficient (Trpa1 KO) mice, as well as after 3, 7 and 10 days of dextran-sulphate (DSS) determined by quantitative PCR.

József Kun (635924)
István Szitter (635925)
Ágnes Kemény (635926)
Anikó Perkecz (635927)
László Kereskai (405369)
Krisztina Pohóczky (635928)
Áron Vincze (3308163)
Szilárd Gódi (635929)
Imre Szabó (635930)
János Szolcsányi (405371)
Erika Pintér (405370)
Zsuzsanna Helyes (405375)

September 2014

Columns represent means±SEM. *p<0.05, **p<0.01 vs. respective water-receiving control; #p<0.05, #...

Tissue microarray assessment identifying multiple differentially expressed genes after exposure to DSS.

Lori A. Coburn (178863)
Xue Gong (144222)
Kshipra Singh (178874)
Mohammad Asim (178880)
Brooks P. Scull (178885)
Margaret M. Allaman (178888)
Christopher S. Williams (111908)
Michael J. Rosen (178893)
M. Kay Washington (178897)
Daniel P. Barry (178900)
M. Blanca Piazuelo (178902)
Robert A. Casero Jr (178905)
Rupesh Chaturvedi (166408)
Zhongming Zhao (40519)
Keith T. Wilson (111897)

March 2012

Mice received treatments as in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.p...

Molecular analysis of predominant bacterial communities in the colon of healthy and diseased mice.

Markus M. Heimesaat (32396)
André Fischer (32397)
Britta Siegmund (32398)
Andreas Kupz (32399)
Julia Niebergall (32400)
David Fuchs (32401)
Hannah-Katharina Jahn (32402)
Marina Freudenberg (32403)
Christoph Loddenkemper (23477)
Arvind Batra (32404)
Hans-Anton Lehr (32405)
Oliver Liesenfeld (32406)
Michael Blaut (32407)
Ulf B. Göbel (32408)
Ralf R. Schumann (32409)
Stefan Bereswill (32410)

February 2013

<div>(A) DGGE profiles of the colon flora in healthy and diseased wt mice. Results are sho...

DSS-induced colitis alters mRNA expression of L-Arg metabolic pathway genes.

Lori A. Coburn (178863)
Xue Gong (144222)
Kshipra Singh (178874)
Mohammad Asim (178880)
Brooks P. Scull (178885)
Margaret M. Allaman (178888)
Christopher S. Williams (111908)
Michael J. Rosen (178893)
M. Kay Washington (178897)
Daniel P. Barry (178900)
M. Blanca Piazuelo (178902)
Robert A. Casero Jr (178905)
Rupesh Chaturvedi (166408)
Zhongming Zhao (40519)
Keith T. Wilson (111897)

March 2012

7-week-old C57BL/6 mice received 4% DSS in the drinking water or water alone (Ctrl) for 7 days. A...

Validation of genes that were differentially expressed in the colon mucosa of ApcMin/+ mice after MA treatment by RT-PCR.

Susana Sánchez-Tena (391019)
Fernando J. Reyes-Zurita (391020)
Santiago Díaz-Moralli (5654302)
Maria Pilar Vinardell (391021)
Michelle Reed (391022)
Francisco García-García (125827)
Joaquín Dopazo (1888828)
José A. Lupiáñez (391023)
Ulrich Günther (391024)
Marta Cascante (67954)

March 2013

Mean ± SD are shown. *, p<0.05; * *, **p<0.01, versus the untreated condition. n = 8/group.</p

Analysis of TRα1 target genes in mice of different genotypes.

Maria Sirakov (173790)
Seham Skah (173792)
Imtiaz Nisar Lone (173794)
Julien Nadjar (173796)
Dimitar Angelov (173799)
Michelina Plateroti (173801)

April 2012

RT-qPCR experiments were performed in the intestine of 6-month-old mice of the indicated genotype...

Gene expression determined by real-time PCR on P0 and P0 TrkA mutant mouse lumbar DRG

Steeve Bourane (40680)
Ilana Méchaly (40681)
Stéphanie Venteo (40682)
Alain Garces (40683)
Agnes Fichard (40684)
Jean Valmier (40685)
Patrick Carroll (40686)

December 2011

Copyright information:Taken from "A SAGE-based screen for genes expressed in sub-po...

Selection and Evaluation of mRNA and miRNA Reference Genes for Expression Studies (qPCR) in Archived Formalin-Fixed and Paraffin-Embedded (FFPE) Colon Samples of DSS-Induced Colitis Mouse Model

Ana Unkovič
Emanuela Boštjančič
Aleš Belič
Martina Perše

January 2023

The choice of appropriate reference genes is essential for correctly interpreting qPCR data and resu...

Quantification of transcript copies of Trp genes per 2.5 ng cDNA synthesized from RNA extracted from the preBötC of adult mice and measured by ddPCR.

Maria Cristina D. Picardo (6388190)
Yae K. Sugimura (6388193)
Kaitlyn E. Dorst (6388196)
Prajkta S. Kallurkar (6388199)
Victoria T. Akins (6388202)
Xingru Ma (6388205)
Ryoichi Teruyama (504813)
Romain Guinamard (277849)
Kaiwen Kam (6388208)
Margaret S. Saha (199603)
Christopher A. Del Negro (3111237)

March 2019

Quantification of transcript copies of Trp genes per 2.5 ng cDNA synthesized from RNA extracted from...

Relative mRNA levels and proteins of indicated genes in the liver and the duodenum of WT and Hepc−/− mice treated with PBS or LPS.

Jean-Christophe Deschemin (405605)
Sophie Vaulont (186278)

April 2013

Relative changes in mRNA levels were quantified by real-time qRT-PCR in the liver, top panel and ...

RT-qPCR of Dnase2b in mouse lens (Fig 3E)

Siddam, Archana D.
Gautier-Courteille, Carole
Perez-Campos, Linette
Anand, Deepti
Kakrana, Atul
Dang, Christine A.
Legagneux, Vincent
Méreau, Agnès
Viet, Justine
Gross, Jeffrey M.
Paillard, Luc
Lachke, Salil A.

March 2018

RT-qPCR assay data for Dnase2b mRNA in WT and Celf1 cKO mouse lens (Fig 3E in Siddam et al. 2018 PLO...

Gene expression profiles of (A) TRPV1 receptor, sensory neuropeptides, such as (B) PACAP, (C) VIP, and their receptors (D) PAC1R, (E) VIPR1, (F) VIPR2, as well as another sensory neuropeptide (G) somatostatin and its receptors (H) SSTR1, (I) SSTR4, and tachykinins (J) TAC 1, (K) TAC 3, as well as their receptor NK1.

József Kun (635924)
István Szitter (635925)
Ágnes Kemény (635926)
Anikó Perkecz (635927)
László Kereskai (405369)
Krisztina Pohóczky (635928)
Áron Vincze (3308163)
Szilárd Gódi (635929)
Imre Szabó (635930)
János Szolcsányi (405371)
Erika Pintér (405370)
Zsuzsanna Helyes (405375)

September 2014

Gene expression was determined in the distal colon homogenates of water-treated non-inflamed wild...

RNA-Seq gene quantification and detection closely corresponds to values obtained by species-specific RT-qPCR.

James R. Bradford (19338)
Matthew Farren (423597)
Steve J. Powell (423598)
Sarah Runswick (423599)
Susie L. Weston (423600)
Helen Brown (423601)
Oona Delpuech (423602)
Mark Wappett (423603)
Neil R. Smith (423604)
T. Hedley Carr (423605)
Jonathan R. Dry (423606)
Neil J. Gibson (423607)
Simon T. Barry (423608)

June 2013

Comparison between RNA-Seq and RT-qPCR across 170 human and 174 mouse genes from a Calu-6 human x...

Tissue distribution of mRNA expression of Spint2 and membrane-bound serine proteases.

Nicolas Faller (550162)
Ivan Gautschi (57863)
Laurent Schild (57864)

April 2014

Quantitative RT-PCRs were performed on selected organs from three wild-type adult mice. From stom...

Colonic expression of mRNA for genes involved in inflammation and anti-inflammation.

Kenichiro Nishikawa (634477)
Naohiro Seo (611836)
Mie Torii (634478)
Nei Ma (634479)
Daisuke Muraoka (611837)
Isao Tawara (507264)
Masahiro Masuya (507263)
Kyosuke Tanaka (634480)
Yoshiyuki Takei (92839)
Hiroshi Shiku (190949)
Naoyuki Katayama (507269)
Takuma Kato (493431)

September 2014

IL-17KO mice and WT controls were treated with DSS as described in the legend for <a href="http:/...

Gene expression profiles of inflammatory cytokines, such as (A) TNF-alpha, (B) BLC, (C) M-CSF, (D) IL-1rn in the distal colon homogenates of water-treated non-inflamed wildtype (WT) and TRPA1-deficient (Trpa1 KO) mice, as well as after 3, 7 and 10 days of dextran-sulphate (DSS) determined by quantitative PCR.

József Kun (635924)
István Szitter (635925)
Ágnes Kemény (635926)
Anikó Perkecz (635927)
László Kereskai (405369)
Krisztina Pohóczky (635928)
Áron Vincze (3308163)
Szilárd Gódi (635929)
Imre Szabó (635930)
János Szolcsányi (405371)
Erika Pintér (405370)
Zsuzsanna Helyes (405375)

September 2014

Columns represent means±SEM. *p<0.05, **p<0.01 vs. respective water-receiving control; #p<0.05, #...

Tissue microarray assessment identifying multiple differentially expressed genes after exposure to DSS.

Lori A. Coburn (178863)
Xue Gong (144222)
Kshipra Singh (178874)
Mohammad Asim (178880)
Brooks P. Scull (178885)
Margaret M. Allaman (178888)
Christopher S. Williams (111908)
Michael J. Rosen (178893)
M. Kay Washington (178897)
Daniel P. Barry (178900)
M. Blanca Piazuelo (178902)
Robert A. Casero Jr (178905)
Rupesh Chaturvedi (166408)
Zhongming Zhao (40519)
Keith T. Wilson (111897)

March 2012

Mice received treatments as in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.p...

Molecular analysis of predominant bacterial communities in the colon of healthy and diseased mice.

Markus M. Heimesaat (32396)
André Fischer (32397)
Britta Siegmund (32398)
Andreas Kupz (32399)
Julia Niebergall (32400)
David Fuchs (32401)
Hannah-Katharina Jahn (32402)
Marina Freudenberg (32403)
Christoph Loddenkemper (23477)
Arvind Batra (32404)
Hans-Anton Lehr (32405)
Oliver Liesenfeld (32406)
Michael Blaut (32407)
Ulf B. Göbel (32408)
Ralf R. Schumann (32409)
Stefan Bereswill (32410)

February 2013

<div>(A) DGGE profiles of the colon flora in healthy and diseased wt mice. Results are sho...

DSS-induced colitis alters mRNA expression of L-Arg metabolic pathway genes.

Lori A. Coburn (178863)
Xue Gong (144222)
Kshipra Singh (178874)
Mohammad Asim (178880)
Brooks P. Scull (178885)
Margaret M. Allaman (178888)
Christopher S. Williams (111908)
Michael J. Rosen (178893)
M. Kay Washington (178897)
Daniel P. Barry (178900)
M. Blanca Piazuelo (178902)
Robert A. Casero Jr (178905)
Rupesh Chaturvedi (166408)
Zhongming Zhao (40519)
Keith T. Wilson (111897)

March 2012

7-week-old C57BL/6 mice received 4% DSS in the drinking water or water alone (Ctrl) for 7 days. A...

Validation of genes that were differentially expressed in the colon mucosa of ApcMin/+ mice after MA treatment by RT-PCR.

Susana Sánchez-Tena (391019)
Fernando J. Reyes-Zurita (391020)
Santiago Díaz-Moralli (5654302)
Maria Pilar Vinardell (391021)
Michelle Reed (391022)
Francisco García-García (125827)
Joaquín Dopazo (1888828)
José A. Lupiáñez (391023)
Ulrich Günther (391024)
Marta Cascante (67954)

March 2013

Mean ± SD are shown. *, p<0.05; * *, **p<0.01, versus the untreated condition. n = 8/group.</p

Analysis of TRα1 target genes in mice of different genotypes.

Maria Sirakov (173790)
Seham Skah (173792)
Imtiaz Nisar Lone (173794)
Julien Nadjar (173796)
Dimitar Angelov (173799)
Michelina Plateroti (173801)

April 2012

RT-qPCR experiments were performed in the intestine of 6-month-old mice of the indicated genotype...

Gene expression determined by real-time PCR on P0 and P0 TrkA mutant mouse lumbar DRG

Steeve Bourane (40680)
Ilana Méchaly (40681)
Stéphanie Venteo (40682)
Alain Garces (40683)
Agnes Fichard (40684)
Jean Valmier (40685)
Patrick Carroll (40686)

December 2011

Copyright information:Taken from "A SAGE-based screen for genes expressed in sub-po...

Selection and Evaluation of mRNA and miRNA Reference Genes for Expression Studies (qPCR) in Archived Formalin-Fixed and Paraffin-Embedded (FFPE) Colon Samples of DSS-Induced Colitis Mouse Model

Ana Unkovič
Emanuela Boštjančič
Aleš Belič
Martina Perše

January 2023

The choice of appropriate reference genes is essential for correctly interpreting qPCR data and resu...

Quantification of transcript copies of Trp genes per 2.5 ng cDNA synthesized from RNA extracted from the preBötC of adult mice and measured by ddPCR.

Maria Cristina D. Picardo (6388190)
Yae K. Sugimura (6388193)
Kaitlyn E. Dorst (6388196)
Prajkta S. Kallurkar (6388199)
Victoria T. Akins (6388202)
Xingru Ma (6388205)
Ryoichi Teruyama (504813)
Romain Guinamard (277849)
Kaiwen Kam (6388208)
Margaret S. Saha (199603)
Christopher A. Del Negro (3111237)

March 2019

Quantification of transcript copies of Trp genes per 2.5 ng cDNA synthesized from RNA extracted from...

Relative mRNA levels and proteins of indicated genes in the liver and the duodenum of WT and Hepc−/− mice treated with PBS or LPS.

Jean-Christophe Deschemin (405605)
Sophie Vaulont (186278)

April 2013

Relative changes in mRNA levels were quantified by real-time qRT-PCR in the liver, top panel and ...

RT-qPCR of Dnase2b in mouse lens (Fig 3E)

Siddam, Archana D.
Gautier-Courteille, Carole
Perez-Campos, Linette
Anand, Deepti
Kakrana, Atul
Dang, Christine A.
Legagneux, Vincent
Méreau, Agnès
Viet, Justine
Gross, Jeffrey M.
Paillard, Luc
Lachke, Salil A.

March 2018

RT-qPCR assay data for Dnase2b mRNA in WT and Celf1 cKO mouse lens (Fig 3E in Siddam et al. 2018 PLO...

Gene expression profiles of (A) TRPV1 receptor, sensory neuropeptides, such as (B) PACAP, (C) VIP, and their receptors (D) PAC1R, (E) VIPR1, (F) VIPR2, as well as another sensory neuropeptide (G) somatostatin and its receptors (H) SSTR1, (I) SSTR4, and tachykinins (J) TAC 1, (K) TAC 3, as well as their receptor NK1.

József Kun (635924)
István Szitter (635925)
Ágnes Kemény (635926)
Anikó Perkecz (635927)
László Kereskai (405369)
Krisztina Pohóczky (635928)
Áron Vincze (3308163)
Szilárd Gódi (635929)
Imre Szabó (635930)
János Szolcsányi (405371)
Erika Pintér (405370)
Zsuzsanna Helyes (405375)

September 2014

Gene expression was determined in the distal colon homogenates of water-treated non-inflamed wild...

RNA-Seq gene quantification and detection closely corresponds to values obtained by species-specific RT-qPCR.

James R. Bradford (19338)
Matthew Farren (423597)
Steve J. Powell (423598)
Sarah Runswick (423599)
Susie L. Weston (423600)
Helen Brown (423601)
Oona Delpuech (423602)
Mark Wappett (423603)
Neil R. Smith (423604)
T. Hedley Carr (423605)
Jonathan R. Dry (423606)
Neil J. Gibson (423607)
Simon T. Barry (423608)

June 2013

Comparison between RNA-Seq and RT-qPCR across 170 human and 174 mouse genes from a Calu-6 human x...

Tissue distribution of mRNA expression of Spint2 and membrane-bound serine proteases.

Nicolas Faller (550162)
Ivan Gautschi (57863)
Laurent Schild (57864)

April 2014

Quantitative RT-PCRs were performed on selected organs from three wild-type adult mice. From stom...

Mouse genes detected by the Quantigene 2.0 Plex RNA Assay in distal colon homogenates of DSS-treated WT and TRPA1 KO mice.

Abstract

Extracted data

Mouse genes detected by the Quantigene 2.0 Plex RNA Assay in distal colon homogenates of DSS-treated WT and TRPA1 KO mice.

Abstract

Extracted data

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