Effect of side chain properties of the terminal amino acid on utilization of dipeptides by the SBP penta mutant complemented with plasmids harboring an individual dipeptide-binding protein.

Restriction of substrate specificity of subtilisin E by introduction of a side chain into a conserved glycine residue

Takagi, Hiroshi
Maeda, Tadao
Ohtsu, Iwao
Tsai, Yeng-Chieh
Nakamori, Shigeru

October 1996

AbstractSubstitution of the conserved Gly127 for residues having a side chain markedly changed the s...

Amino acid propensity of DSI and NSI of pH dependent domain-swapped proteins with reference to non-redundant 3Dswapplus entries.

Prashant Shingate (146643)
Jim Warwicker (12788)
Ramanathan Sowdhamini (5068)

June 2015

Amino acid propensity of DSI and NSI of pH dependent domain-swapped proteins with reference to no...

Fate of peptides in peptidase mutants of Lactococcus lactis

Kunji, E.R S
Mierau, I
Poolman, B.
Konings, W.N
Venema, G
Kok, J.

July 1996

The utilization of exogenous peptides was studied in mutants of Lactococcus lactis in which combinat...

Effect of the localization of an amino acid residue on utilization of a dipeptide.

Daniel Pletzer (648371)
Corinne Lafon (648372)
Yvonne Braun (332810)
Thilo Köhler (249215)
Malcolm G. P. Page (648373)
Michael Mourez (246675)
Helge Weingart (648374)

October 2014

The middle square boxes represent the specific amino acid. The background color of the box gives ...

Utilization of dipeptides by strains of the SBP penta mutant complemented with individual SBPs.

Daniel Pletzer (648371)
Corinne Lafon (648372)
Yvonne Braun (332810)
Thilo Köhler (249215)
Malcolm G. P. Page (648373)
Michael Mourez (246675)
Helge Weingart (648374)

October 2014

The numbers in parentheses indicate the total number of dipeptides analyzed. There are no signifi...

Global utilization pattern of dipeptides by PA14, the dipeptide transporter DppBCDF and the SBPs DppA1–A5.

Daniel Pletzer (648371)
Corinne Lafon (648372)
Yvonne Braun (332810)
Thilo Köhler (249215)
Malcolm G. P. Page (648373)
Michael Mourez (246675)
Helge Weingart (648374)

October 2014

The rings show the total number of dipeptides utilized by the wild-type strain PA14 (outer purple...

The impact of amino acid side chain mutations in conformational design of peptides and proteins

Laufer, B.
Frank, A.O.
Chatterjee, J.
Neubauer, T.
Mas Moruno, Carlos
Kummerlöwe, G.
Kessler, H.

January 2010

Local energetic effects of amino acid replacements are often considered to have only a moderate infl...

Mutants used to define functional residues in SMIPP-S complement inhibition.

Simone L. Reynolds (152049)
Robert N. Pike (105032)
Angela Mika (152045)
Anna M. Blom (53233)
Andreas Hofmann (160401)
Lakshmi C. Wijeyewickrema (105029)
Dave Kemp (567664)
Katja Fischer (152079)

May 2014

Mutants used to define functional residues in SMIPP-S complement inhibition.</p

Growth characteristics of knockout mutants of substrate binding proteins and ABC transporter gene clusters.

Timothy F Murphy (3156090)
Aimee L. Brauer (3156084)
Antoinette Johnson (3156078)
Charmaine Kirkham (342705)

July 2016

Growth characteristics of knockout mutants of substrate binding proteins and ABC transporter gene...

Coupling protein stability and protein function in Escherichia coli CspA

Hillier, Brian J
Rodriguez, Hector M
Gregoret, Lydia M

April 1998

Background: CspA is a small protein that binds single-stranded RNA and DNA. The binding site of CspA...

Summary of side chain interactions and possible structural changes due to mutations.

Cinzia Ambrosi (446348)
Amy E. Walker (446349)
Adam D. DePriest (446350)
Angela C. Cone (446351)
Connie Lu (446352)
John Badger (446353)
I. Martha Skerrett (446354)
Gina E. Sosinsky (446355)

August 2013

Based on an analysis of the current atomic model, we analyzed interactions between residues (midd...

Collateral fitness effects of mutations

Mehlhoff, Jacob Donovan

July 2022

Mutations act as a driving force of evolution by providing the genetic variation upon which selectiv...

Effect of additional mutations in the N-terminal region of the SBD on binding with PHD3.

Anupriya Gopalsamy (242792)
Thilo Hagen (249161)
Kunchithapadam Swaminathan (141804)

September 2014

(a) The 10 similar amino acids in the N terminal region (1–00) of Siah1 and Siah2 SBD are ...

Binding affinities for the arginine mutant/wild-type/C-terminally truncated/proteins in complex with three dsDNA fragments of different lengths.

Bo-Lin Lin (1735951)
Chin-Yu Chen (6723)
Chun-Hsiang Huang (558362)
Tzu-Ping Ko (6724)
Cheng-Hung Chiang (3356564)
Kuan-Fu Lin (3625538)
Yuan-Chih Chang (29676)
Po-Yen Lin (1701052)
Hui-Hsu Gavin Tsai (1643845)
Andrew H.-J. Wang (6728)

January 2017

Binding affinities for the arginine mutant/wild-type/C-terminally truncated/proteins in complex w...

Growth of PA14, the SBP penta mutant, and strains of the penta mutant complemented with individual SBPs in minimal medium supplemented with di/tripeptides as the sole nitrogen sourcea.

Daniel Pletzer (648371)
Corinne Lafon (648372)
Yvonne Braun (332810)
Thilo Köhler (249215)
Malcolm G. P. Page (648373)
Michael Mourez (246675)
Helge Weingart (648374)

October 2014

Growth of PA14, the SBP penta mutant, and strains of the penta mutant complemented with individua...

Restriction of substrate specificity of subtilisin E by introduction of a side chain into a conserved glycine residue

Takagi, Hiroshi
Maeda, Tadao
Ohtsu, Iwao
Tsai, Yeng-Chieh
Nakamori, Shigeru

October 1996

AbstractSubstitution of the conserved Gly127 for residues having a side chain markedly changed the s...

Amino acid propensity of DSI and NSI of pH dependent domain-swapped proteins with reference to non-redundant 3Dswapplus entries.

Prashant Shingate (146643)
Jim Warwicker (12788)
Ramanathan Sowdhamini (5068)

June 2015

Amino acid propensity of DSI and NSI of pH dependent domain-swapped proteins with reference to no...

Fate of peptides in peptidase mutants of Lactococcus lactis

Kunji, E.R S
Mierau, I
Poolman, B.
Konings, W.N
Venema, G
Kok, J.

July 1996

The utilization of exogenous peptides was studied in mutants of Lactococcus lactis in which combinat...

Effect of the localization of an amino acid residue on utilization of a dipeptide.

Daniel Pletzer (648371)
Corinne Lafon (648372)
Yvonne Braun (332810)
Thilo Köhler (249215)
Malcolm G. P. Page (648373)
Michael Mourez (246675)
Helge Weingart (648374)

October 2014

The middle square boxes represent the specific amino acid. The background color of the box gives ...

Utilization of dipeptides by strains of the SBP penta mutant complemented with individual SBPs.

Daniel Pletzer (648371)
Corinne Lafon (648372)
Yvonne Braun (332810)
Thilo Köhler (249215)
Malcolm G. P. Page (648373)
Michael Mourez (246675)
Helge Weingart (648374)

October 2014

The numbers in parentheses indicate the total number of dipeptides analyzed. There are no signifi...

Global utilization pattern of dipeptides by PA14, the dipeptide transporter DppBCDF and the SBPs DppA1–A5.

Daniel Pletzer (648371)
Corinne Lafon (648372)
Yvonne Braun (332810)
Thilo Köhler (249215)
Malcolm G. P. Page (648373)
Michael Mourez (246675)
Helge Weingart (648374)

October 2014

The rings show the total number of dipeptides utilized by the wild-type strain PA14 (outer purple...

The impact of amino acid side chain mutations in conformational design of peptides and proteins

Laufer, B.
Frank, A.O.
Chatterjee, J.
Neubauer, T.
Mas Moruno, Carlos
Kummerlöwe, G.
Kessler, H.

January 2010

Local energetic effects of amino acid replacements are often considered to have only a moderate infl...

Mutants used to define functional residues in SMIPP-S complement inhibition.

Simone L. Reynolds (152049)
Robert N. Pike (105032)
Angela Mika (152045)
Anna M. Blom (53233)
Andreas Hofmann (160401)
Lakshmi C. Wijeyewickrema (105029)
Dave Kemp (567664)
Katja Fischer (152079)

May 2014

Mutants used to define functional residues in SMIPP-S complement inhibition.</p

Growth characteristics of knockout mutants of substrate binding proteins and ABC transporter gene clusters.

Timothy F Murphy (3156090)
Aimee L. Brauer (3156084)
Antoinette Johnson (3156078)
Charmaine Kirkham (342705)

July 2016

Growth characteristics of knockout mutants of substrate binding proteins and ABC transporter gene...

Coupling protein stability and protein function in Escherichia coli CspA

Hillier, Brian J
Rodriguez, Hector M
Gregoret, Lydia M

April 1998

Background: CspA is a small protein that binds single-stranded RNA and DNA. The binding site of CspA...

Summary of side chain interactions and possible structural changes due to mutations.

Cinzia Ambrosi (446348)
Amy E. Walker (446349)
Adam D. DePriest (446350)
Angela C. Cone (446351)
Connie Lu (446352)
John Badger (446353)
I. Martha Skerrett (446354)
Gina E. Sosinsky (446355)

August 2013

Based on an analysis of the current atomic model, we analyzed interactions between residues (midd...

Collateral fitness effects of mutations

Mehlhoff, Jacob Donovan

July 2022

Mutations act as a driving force of evolution by providing the genetic variation upon which selectiv...

Effect of additional mutations in the N-terminal region of the SBD on binding with PHD3.

Anupriya Gopalsamy (242792)
Thilo Hagen (249161)
Kunchithapadam Swaminathan (141804)

September 2014

(a) The 10 similar amino acids in the N terminal region (1–00) of Siah1 and Siah2 SBD are ...

Binding affinities for the arginine mutant/wild-type/C-terminally truncated/proteins in complex with three dsDNA fragments of different lengths.

Bo-Lin Lin (1735951)
Chin-Yu Chen (6723)
Chun-Hsiang Huang (558362)
Tzu-Ping Ko (6724)
Cheng-Hung Chiang (3356564)
Kuan-Fu Lin (3625538)
Yuan-Chih Chang (29676)
Po-Yen Lin (1701052)
Hui-Hsu Gavin Tsai (1643845)
Andrew H.-J. Wang (6728)

January 2017

Binding affinities for the arginine mutant/wild-type/C-terminally truncated/proteins in complex w...

Growth of PA14, the SBP penta mutant, and strains of the penta mutant complemented with individual SBPs in minimal medium supplemented with di/tripeptides as the sole nitrogen sourcea.

Daniel Pletzer (648371)
Corinne Lafon (648372)
Yvonne Braun (332810)
Thilo Köhler (249215)
Malcolm G. P. Page (648373)
Michael Mourez (246675)
Helge Weingart (648374)

October 2014

Growth of PA14, the SBP penta mutant, and strains of the penta mutant complemented with individua...

Restriction of substrate specificity of subtilisin E by introduction of a side chain into a conserved glycine residue

Takagi, Hiroshi
Maeda, Tadao
Ohtsu, Iwao
Tsai, Yeng-Chieh
Nakamori, Shigeru

October 1996

AbstractSubstitution of the conserved Gly127 for residues having a side chain markedly changed the s...

Amino acid propensity of DSI and NSI of pH dependent domain-swapped proteins with reference to non-redundant 3Dswapplus entries.

Prashant Shingate (146643)
Jim Warwicker (12788)
Ramanathan Sowdhamini (5068)

June 2015

Amino acid propensity of DSI and NSI of pH dependent domain-swapped proteins with reference to no...

Fate of peptides in peptidase mutants of Lactococcus lactis

Kunji, E.R S
Mierau, I
Poolman, B.
Konings, W.N
Venema, G
Kok, J.

July 1996

The utilization of exogenous peptides was studied in mutants of Lactococcus lactis in which combinat...

Effect of side chain properties of the terminal amino acid on utilization of dipeptides by the SBP penta mutant complemented with plasmids harboring an individual dipeptide-binding protein.

Abstract

Extracted data

Effect of side chain properties of the terminal amino acid on utilization of dipeptides by the SBP penta mutant complemented with plasmids harboring an individual dipeptide-binding protein.

Abstract

Extracted data

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