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Frequency of mutations and amino acid changes in 89 gastric carcinomas.

Seokhwi Kim (654727)
Jeeyun Lee (145602)
Min Eui Hong (654728)
In-Gu Do (173905)
So Young Kang (145622)
Sang Yun Ha (580178)
Seung Tae Kim (500491)
Se Hoon Park (14424)
Won Ki Kang (157708)
Min-Gew Choi (501405)
Jun Ho Lee (189689)
Tae Sung Sohn (277132)
Jae Moon Bae (277133)
Sung Kim (59072)
Duk-Hwan Kim (483093)
Kyoung-Mee Kim (145630)

Publication date

November 2014

DOI

10.1371/journal.pone.0111693.t002

Abstract

<p>*N, total number of samples with mutation, <sup>§</sup>INS/DEL in the remaining cases.</p><p>Frequency of mutations and amino acid changes in 89 gastric carcinomas.</p

Extracted data

Related items

Frequency distribution of single point mutations occurring at codon 12 of K-RAS in morphologically not acceptable, acceptable and dataset mCRC-derived tumor specimens.

Sara Mariani (717498)
Cristiana Di Bello (717499)
Lisa Bonello (23152)
Fabrizio Tondat (717500)
Donatella Pacchioni (717501)
Luca Molinaro (717502)
Antonella Barreca (717503)
Luigia Macrì (627923)
Luigi Chiusa (627919)
Paola Francia di Celle (717504)
Paola Cassoni (627924)
Anna Sapino (69590)

April 2015

<p><i>NA</i> = Not acceptable samples</p><p><i>A</i> = Acceptable samples</p><p>Cosmic DB = Cosmic d...

Relative frequency of amino acid substitutions.

János Molnár (438764)
Gergely Szakács (3177213)
Gábor E. Tusnády (57463)

March 2016

<p>Mutated amino acids are shown in rows; mutant amino acids are shown in columns associated with po...

Prevalence of mutations in the investigated genes in our cohort of 47 CORD patients.

Li Huang (107408)
Qingyan Zhang (420347)
Shiqiang Li (196342)
Liping Guan (420348)
Xueshan Xiao (196343)
Jianguo Zhang (6482)
Xiaoyun Jia (196340)
Wenmin Sun (420349)
Zhihong Zhu (227325)
Yang Gao (18005)
Ye Yin (420350)
Panfeng Wang (196344)
Xiangming Guo (196345)
Jun Wang (5906)
Qingjiong Zhang (196348)

June 2013

<p>Prevalence of mutations in the investigated genes in our cohort of 47 CORD patients.</p

Frequency of GMDS mutation in original and metastatic lesions of human colorectal cancer.

Kotarosumitomo Nakayama (425236)
Kenta Moriwaki (438565)
Taku Imai (438566)
Shinichiro Shinzaki (438567)
Yoshihiro Kamada (425228)
Kohei Murata (438568)
Eiji Miyoshi (343973)

July 2013

<p>Frequency of GMDS mutation in original and metastatic lesions of human colorectal cancer.</p

Frequency of somatic mutations in esophageal squamous cell carcinoma.

Chi Hoon Maeng (145599)
Jeeyun Lee (145602)
Paul van Hummelen (145606)
Se Hoon Park (14424)
Emanuele Palescandolo (145611)
Jiryeon Jang (145615)
Ha Young Park (145618)
So Young Kang (145622)
Laura MacConaill (145626)
Kyoung-Mee Kim (145630)
Young-Mog Shim (145635)

August 2012

†<p>7 cases were pairs of primary and metastatic organ.</p>††<p>Percentage of total number of patien...

The frequency of mutations detected in <i>BRCA1/2</i> with NGS among 454 individuals, per year and total (2014–2016).

Artur Kowalik (4164751)
Monika Siołek (5549693)
Janusz Kopczyński (4164760)
Kamila Krawiec (5549687)
Joanna Kalisz (5549690)
Sebastian Zięba (5549699)
Beata Kozak-Klonowska (5549678)
Elżbieta Wypiórkiewicz (4164754)
Jowita Furmańczyk (5549681)
Ewelina Nowak-Ozimek (5549696)
Małgorzata Chłopek (4164769)
Paweł Macek (5549684)
Jolanta Smok-Kalwat (5549702)
Stanisław Góźdź (778173)

July 2018

<p>The frequency of mutations detected in <i>BRCA1/2</i> with NGS among 454 individuals, per year an...

Frequency of mutations in tested tumors with 95% confidence intervals (CI).

Filip Janku (160679)
J. Jack Lee (169986)
Apostolia M. Tsimberidou (346958)
David S. Hong (160674)
Aung Naing (160702)
Gerald S. Falchook (160692)
Siqing Fu (160695)
Rajyalakshmi Luthra (160699)
Ignacio Garrido-Laguna (160665)
Razelle Kurzrock (160706)

February 2013

<p>A. <i>PIK3CA</i> mutations. B. <i>KRAS</i> mutations. C. <i>NRAS</i> mutations. D. <i>BRAF</i> mu...

Frequency of CDH1 germline mutations in gastric carcinoma coming from high- and low-risk areas: metanalysis and systematic review of the literature

CORSO, GIOVANNI
MARRELLI, DANIELE
PASCALE, VALERIA
ROVIELLO, FRANCO
Vindigni C

January 2012

BACKGROUND: The frequency of E-cadherin germline mutations in countries with different incidence r...

Number of accumulated gene mutations for serrated adenocarcinomas in normal tissue and adenoma-adjacent tissue in 15 cancer-related genes in each colon cancer subtyping group.

Daiki Hirano (4458943)
Yuji Urabe (134994)
Shinji Tanaka (172295)
Koki Nakamura (5340158)
Yuki Ninomiya (6383414)
Ryo Yuge (6383417)
Ryohei Hayashi (3663382)
Shiro Oka (4329796)
Yasuhiko Kitadai (3343847)
Fumio Shimamoto (280008)
Koji Arihiro (56456)
Kazuaki Chayama (128675)

February 2019

Number of accumulated gene mutations for serrated adenocarcinomas in normal tissue and adenoma-adjac...

Frequencies of alterations between different groups of adenocarcinomas (NL = Normal, MT = Mutant, AMPL = gene amplification).

Ilenia Chatziandreou (775003)
Panagiota Tsioli (775004)
Stratigoula Sakellariou (775005)
Ioanna Mourkioti (775006)
Ioanna Giannopoulou (23629)
Georgia Levidou (684774)
Penelope Korkolopoulou (84594)
Efstratios Patsouris (62260)
Angelica A. Saetta (775007)

July 2015

<p>Frequencies of alterations between different groups of adenocarcinomas (NL = Normal, MT = Mutant,...

Amino acid mutation frequencies at each position do not differ significantly among groups.

Elisabeth Bowers (19644)
Ronald W. Scamurra (506431)
Anil Asrani (506432)
Lydie Beniguel (186666)
Samantha MaWhinney (506433)
Kathryne M. Keays (506434)
Joseph R. Thurn (506435)
Edward N. Janoff (234749)

January 2014

<p>The percent of non-conservative (N; black bars) or conservative (C; gray bars) mutations relative...

Frequency and percentage of <i>KRAS</i> and <i>BRAF</i> mutations in normal (N), low-grade dysplasia (LGD), high-grade dysplasia (HGD) and colorectal cancer (CRC) samples.

Árpád V. Patai (132272)
Gábor Valcz (466332)
Péter Hollósi (155769)
Alexandra Kalmár (123738)
Bálint Péterfia (130981)
Árpád Patai (785267)
Barnabás Wichmann (123721)
Sándor Spisák (123726)
Barbara Kinga Barták (785268)
Katalin Leiszter (123735)
Kinga Tóth (123732)
Ferenc Sipos (123723)
Ilona Kovalszky (130989)
Zoltán Péter (785269)
Pál Miheller (677099)
Zsolt Tulassay (123741)
Béla Molnár (123745)

August 2015

<p>Frequency and percentage of <i>KRAS</i> and <i>BRAF</i> mutations in normal (N), low-grade dyspla...

Average proportions of erroneous amino acids after passing exomes through different cancer channels at mutation rater 0.0001, 0.001, and 0.01.

Ehsan Ebrahimzadeh (6656060)
Maggie Engler (6656063)
David Tse (796123)
Razvan Cristescu (4181038)
Aslan Tchamkerten (6656066)

May 2019

Average proportions of erroneous amino acids after passing exomes through different cancer channels ...

Frequency of gene mutations and germline FLT1 allelic variants in all patients and IMDC intermediate risk patients.

David D. Stenehjem (6263936)
Andrew W. Hahn (6263939)
David M. Gill (6263942)
Daniel Albertson (6263945)
Banumathy Gowrishankar (6263948)
Joseph Merriman (6263951)
Archana M. Agarwal (6263954)
Venkata Thodima (6263957)
Erik B. Harrington (6263960)
Trang H. Au (6263963)
Benjamin L. Maughan (6263966)
Jane Houldsworth (111575)
Sumanta K. Pal (163800)
Neeraj Agarwal (53040)

January 2019

Frequency of gene mutations and germline FLT1 allelic variants in all patients and IMDC intermediate...

High-Throughput Mutation Profiling Identifies Frequent Somatic Mutations in Advanced Gastric Adenocarcinoma

Jeeyun Lee (145602)
Paul van Hummelen (145606)
Christina Go (157689)
Emanuele Palescandolo (145611)
Jiryeon Jang (145615)
Ha Young Park (145618)
So Young Kang (145622)
Joon Oh Park (157701)
Won Ki Kang (157708)
Laura MacConaill (145626)
Kyoung-Mee Kim (145630)

June 2012

<div><h3>Background</h3><p>Gastric cancer is one of the leading cancer types in incidence and mortal...

Frequency distribution of single point mutations occurring at codon 12 of K-RAS in morphologically not acceptable, acceptable and dataset mCRC-derived tumor specimens.

Sara Mariani (717498)
Cristiana Di Bello (717499)
Lisa Bonello (23152)
Fabrizio Tondat (717500)
Donatella Pacchioni (717501)
Luca Molinaro (717502)
Antonella Barreca (717503)
Luigia Macrì (627923)
Luigi Chiusa (627919)
Paola Francia di Celle (717504)
Paola Cassoni (627924)
Anna Sapino (69590)

April 2015

<p><i>NA</i> = Not acceptable samples</p><p><i>A</i> = Acceptable samples</p><p>Cosmic DB = Cosmic d...

Relative frequency of amino acid substitutions.

János Molnár (438764)
Gergely Szakács (3177213)
Gábor E. Tusnády (57463)

March 2016

<p>Mutated amino acids are shown in rows; mutant amino acids are shown in columns associated with po...

Prevalence of mutations in the investigated genes in our cohort of 47 CORD patients.

Li Huang (107408)
Qingyan Zhang (420347)
Shiqiang Li (196342)
Liping Guan (420348)
Xueshan Xiao (196343)
Jianguo Zhang (6482)
Xiaoyun Jia (196340)
Wenmin Sun (420349)
Zhihong Zhu (227325)
Yang Gao (18005)
Ye Yin (420350)
Panfeng Wang (196344)
Xiangming Guo (196345)
Jun Wang (5906)
Qingjiong Zhang (196348)

June 2013

<p>Prevalence of mutations in the investigated genes in our cohort of 47 CORD patients.</p

Frequency of GMDS mutation in original and metastatic lesions of human colorectal cancer.

Kotarosumitomo Nakayama (425236)
Kenta Moriwaki (438565)
Taku Imai (438566)
Shinichiro Shinzaki (438567)
Yoshihiro Kamada (425228)
Kohei Murata (438568)
Eiji Miyoshi (343973)

July 2013

<p>Frequency of GMDS mutation in original and metastatic lesions of human colorectal cancer.</p

Frequency of somatic mutations in esophageal squamous cell carcinoma.

Chi Hoon Maeng (145599)
Jeeyun Lee (145602)
Paul van Hummelen (145606)
Se Hoon Park (14424)
Emanuele Palescandolo (145611)
Jiryeon Jang (145615)
Ha Young Park (145618)
So Young Kang (145622)
Laura MacConaill (145626)
Kyoung-Mee Kim (145630)
Young-Mog Shim (145635)

August 2012

†<p>7 cases were pairs of primary and metastatic organ.</p>††<p>Percentage of total number of patien...

The frequency of mutations detected in <i>BRCA1/2</i> with NGS among 454 individuals, per year and total (2014–2016).

Artur Kowalik (4164751)
Monika Siołek (5549693)
Janusz Kopczyński (4164760)
Kamila Krawiec (5549687)
Joanna Kalisz (5549690)
Sebastian Zięba (5549699)
Beata Kozak-Klonowska (5549678)
Elżbieta Wypiórkiewicz (4164754)
Jowita Furmańczyk (5549681)
Ewelina Nowak-Ozimek (5549696)
Małgorzata Chłopek (4164769)
Paweł Macek (5549684)
Jolanta Smok-Kalwat (5549702)
Stanisław Góźdź (778173)

July 2018

<p>The frequency of mutations detected in <i>BRCA1/2</i> with NGS among 454 individuals, per year an...

Frequency of mutations in tested tumors with 95% confidence intervals (CI).

Filip Janku (160679)
J. Jack Lee (169986)
Apostolia M. Tsimberidou (346958)
David S. Hong (160674)
Aung Naing (160702)
Gerald S. Falchook (160692)
Siqing Fu (160695)
Rajyalakshmi Luthra (160699)
Ignacio Garrido-Laguna (160665)
Razelle Kurzrock (160706)

February 2013

<p>A. <i>PIK3CA</i> mutations. B. <i>KRAS</i> mutations. C. <i>NRAS</i> mutations. D. <i>BRAF</i> mu...

Frequency of CDH1 germline mutations in gastric carcinoma coming from high- and low-risk areas: metanalysis and systematic review of the literature

CORSO, GIOVANNI
MARRELLI, DANIELE
PASCALE, VALERIA
ROVIELLO, FRANCO
Vindigni C

January 2012

BACKGROUND: The frequency of E-cadherin germline mutations in countries with different incidence r...

Number of accumulated gene mutations for serrated adenocarcinomas in normal tissue and adenoma-adjacent tissue in 15 cancer-related genes in each colon cancer subtyping group.

Daiki Hirano (4458943)
Yuji Urabe (134994)
Shinji Tanaka (172295)
Koki Nakamura (5340158)
Yuki Ninomiya (6383414)
Ryo Yuge (6383417)
Ryohei Hayashi (3663382)
Shiro Oka (4329796)
Yasuhiko Kitadai (3343847)
Fumio Shimamoto (280008)
Koji Arihiro (56456)
Kazuaki Chayama (128675)

February 2019

Number of accumulated gene mutations for serrated adenocarcinomas in normal tissue and adenoma-adjac...

Frequencies of alterations between different groups of adenocarcinomas (NL = Normal, MT = Mutant, AMPL = gene amplification).

Ilenia Chatziandreou (775003)
Panagiota Tsioli (775004)
Stratigoula Sakellariou (775005)
Ioanna Mourkioti (775006)
Ioanna Giannopoulou (23629)
Georgia Levidou (684774)
Penelope Korkolopoulou (84594)
Efstratios Patsouris (62260)
Angelica A. Saetta (775007)

July 2015

<p>Frequencies of alterations between different groups of adenocarcinomas (NL = Normal, MT = Mutant,...

Amino acid mutation frequencies at each position do not differ significantly among groups.

Elisabeth Bowers (19644)
Ronald W. Scamurra (506431)
Anil Asrani (506432)
Lydie Beniguel (186666)
Samantha MaWhinney (506433)
Kathryne M. Keays (506434)
Joseph R. Thurn (506435)
Edward N. Janoff (234749)

January 2014

<p>The percent of non-conservative (N; black bars) or conservative (C; gray bars) mutations relative...

Frequency and percentage of <i>KRAS</i> and <i>BRAF</i> mutations in normal (N), low-grade dysplasia (LGD), high-grade dysplasia (HGD) and colorectal cancer (CRC) samples.

Árpád V. Patai (132272)
Gábor Valcz (466332)
Péter Hollósi (155769)
Alexandra Kalmár (123738)
Bálint Péterfia (130981)
Árpád Patai (785267)
Barnabás Wichmann (123721)
Sándor Spisák (123726)
Barbara Kinga Barták (785268)
Katalin Leiszter (123735)
Kinga Tóth (123732)
Ferenc Sipos (123723)
Ilona Kovalszky (130989)
Zoltán Péter (785269)
Pál Miheller (677099)
Zsolt Tulassay (123741)
Béla Molnár (123745)

August 2015

<p>Frequency and percentage of <i>KRAS</i> and <i>BRAF</i> mutations in normal (N), low-grade dyspla...

Average proportions of erroneous amino acids after passing exomes through different cancer channels at mutation rater 0.0001, 0.001, and 0.01.

Ehsan Ebrahimzadeh (6656060)
Maggie Engler (6656063)
David Tse (796123)
Razvan Cristescu (4181038)
Aslan Tchamkerten (6656066)

May 2019

Average proportions of erroneous amino acids after passing exomes through different cancer channels ...

Frequency of gene mutations and germline FLT1 allelic variants in all patients and IMDC intermediate risk patients.

David D. Stenehjem (6263936)
Andrew W. Hahn (6263939)
David M. Gill (6263942)
Daniel Albertson (6263945)
Banumathy Gowrishankar (6263948)
Joseph Merriman (6263951)
Archana M. Agarwal (6263954)
Venkata Thodima (6263957)
Erik B. Harrington (6263960)
Trang H. Au (6263963)
Benjamin L. Maughan (6263966)
Jane Houldsworth (111575)
Sumanta K. Pal (163800)
Neeraj Agarwal (53040)

January 2019

Frequency of gene mutations and germline FLT1 allelic variants in all patients and IMDC intermediate...

High-Throughput Mutation Profiling Identifies Frequent Somatic Mutations in Advanced Gastric Adenocarcinoma

Jeeyun Lee (145602)
Paul van Hummelen (145606)
Christina Go (157689)
Emanuele Palescandolo (145611)
Jiryeon Jang (145615)
Ha Young Park (145618)
So Young Kang (145622)
Joon Oh Park (157701)
Won Ki Kang (157708)
Laura MacConaill (145626)
Kyoung-Mee Kim (145630)

June 2012

<div><h3>Background</h3><p>Gastric cancer is one of the leading cancer types in incidence and mortal...

Frequency distribution of single point mutations occurring at codon 12 of K-RAS in morphologically not acceptable, acceptable and dataset mCRC-derived tumor specimens.

Sara Mariani (717498)
Cristiana Di Bello (717499)
Lisa Bonello (23152)
Fabrizio Tondat (717500)
Donatella Pacchioni (717501)
Luca Molinaro (717502)
Antonella Barreca (717503)
Luigia Macrì (627923)
Luigi Chiusa (627919)
Paola Francia di Celle (717504)
Paola Cassoni (627924)
Anna Sapino (69590)

April 2015

<p><i>NA</i> = Not acceptable samples</p><p><i>A</i> = Acceptable samples</p><p>Cosmic DB = Cosmic d...

Relative frequency of amino acid substitutions.

János Molnár (438764)
Gergely Szakács (3177213)
Gábor E. Tusnády (57463)

March 2016

<p>Mutated amino acids are shown in rows; mutant amino acids are shown in columns associated with po...

Prevalence of mutations in the investigated genes in our cohort of 47 CORD patients.

Li Huang (107408)
Qingyan Zhang (420347)
Shiqiang Li (196342)
Liping Guan (420348)
Xueshan Xiao (196343)
Jianguo Zhang (6482)
Xiaoyun Jia (196340)
Wenmin Sun (420349)
Zhihong Zhu (227325)
Yang Gao (18005)
Ye Yin (420350)
Panfeng Wang (196344)
Xiangming Guo (196345)
Jun Wang (5906)
Qingjiong Zhang (196348)

June 2013

<p>Prevalence of mutations in the investigated genes in our cohort of 47 CORD patients.</p