<p>(A) Boxplot showing the distributions of half-lives for mRNAs (left), ncRNAs (middle) and introns (right). (B) Overlap between mRNAs down-regulated and destabilized in <i>set1</i> mutants. The number in brackets corresponds to the expected overlap if randomly-generated lists of the corresponding sizes were used. The p value of the observed overlap is shown on the right side. (C) As in B, comparing mRNAs up-regulated and stabilized in <i>set1Δ</i> cells. (D) As in B, for mRNAs up-regulated and stabilized in <i>zfs1</i> mutants. (E) As in B, for mRNAs overexpressed and stabilized in <i>SPAC17H9.04c</i>. (F) As in B, for mRNAs down-regulated and destabilized in <i>rpm1</i> mutants. (G) As in B, for mRNAs up-regulated and stabilized in <i>sc...
<p>A) Individual lists of proteins that changed by at least 1.5-fold were compared to the mRNA data ...
Comparison of mRNA half-life measurements in S. cerevisiae. The pairwise scatterplots compare mRNA h...
<p>(A) Box plot for log2 ratios of mRNA expression levels between MCF-7 and MCF-10A cells of the sho...
<p><i>(Top)</i> In (A), the fold change in mRNA abundance for genes whose mRNA levels increase at le...
<p>(A) mRNAs that were predicted by the microarray to have significantly altered abundance were eval...
<p>(A) Distribution of fold changes in gene expression (<i>y-axis</i>, log<sub>2</sub> scale) for ge...
<p>(A) Correlation of estimates of poly(A)-tail length in wild-type seedlings with the mRNA half-lif...
<p>Venn diagrams illustrating the overlap between upregulated (A) and downregulated (B) genes in the...
<p>A, Datasets vary widely in coverage of 5,887 yeast coding sequences and in resulting estimates of...
<p>Secondary structure profiles of mRNA regions. Red, black, green: average secondary structure prob...
Test for association of the out-of-frame inhibitory codon pairs with mRNA decay rate, protein abunda...
<p>(A) Boxplots of the correlation estimates between the Ribosome gene sets and random gene sets, an...
(A) Graph showing the correlation between mRNA half-life and 3′ UTR length. Data fit with linear reg...
Names have been shortened by removing the “bioseq2” prefix for all of them. (A) Inter-replicate agre...
<p>a) mRNA mean and variance in <i>S. cerevisiae</i> plotted against each other in log-scale. Blue d...
<p>A) Individual lists of proteins that changed by at least 1.5-fold were compared to the mRNA data ...
Comparison of mRNA half-life measurements in S. cerevisiae. The pairwise scatterplots compare mRNA h...
<p>(A) Box plot for log2 ratios of mRNA expression levels between MCF-7 and MCF-10A cells of the sho...
<p><i>(Top)</i> In (A), the fold change in mRNA abundance for genes whose mRNA levels increase at le...
<p>(A) mRNAs that were predicted by the microarray to have significantly altered abundance were eval...
<p>(A) Distribution of fold changes in gene expression (<i>y-axis</i>, log<sub>2</sub> scale) for ge...
<p>(A) Correlation of estimates of poly(A)-tail length in wild-type seedlings with the mRNA half-lif...
<p>Venn diagrams illustrating the overlap between upregulated (A) and downregulated (B) genes in the...
<p>A, Datasets vary widely in coverage of 5,887 yeast coding sequences and in resulting estimates of...
<p>Secondary structure profiles of mRNA regions. Red, black, green: average secondary structure prob...
Test for association of the out-of-frame inhibitory codon pairs with mRNA decay rate, protein abunda...
<p>(A) Boxplots of the correlation estimates between the Ribosome gene sets and random gene sets, an...
(A) Graph showing the correlation between mRNA half-life and 3′ UTR length. Data fit with linear reg...
Names have been shortened by removing the “bioseq2” prefix for all of them. (A) Inter-replicate agre...
<p>a) mRNA mean and variance in <i>S. cerevisiae</i> plotted against each other in log-scale. Blue d...
<p>A) Individual lists of proteins that changed by at least 1.5-fold were compared to the mRNA data ...
Comparison of mRNA half-life measurements in S. cerevisiae. The pairwise scatterplots compare mRNA h...
<p>(A) Box plot for log2 ratios of mRNA expression levels between MCF-7 and MCF-10A cells of the sho...