<p>The data matrix included 1,653 characters and 180 sequences. Newly obtained sequences are bold-faced. ML and MP bootstrap values greater than 50% are shown at corresponding nodes. Subclades I−IV are collapsed into triangles for visual clarity; an un-collapsed version of the tree can be found as <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0108915#pone.0108915.s003" target="_blank">Figure S1</a>. Numbers in parentheses indicates the number of sequences obtained and analyzed for the corresponding sample. See <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0108915#pone-0108915-t001" target="_blank">Table 1</a> for naming conventions and GenBank accession numbers.</p
FIGURE 2. Bayesian trees of 9729-bp sequence of mtDNA and nuDNA for the species of Meristogenys. Num...
<p>Sequences marked with solid circles are 100% identical to those under GenBank accession numbers A...
FIGURE 1. Maximum Likelihood tree of the Amazophrynella species based on the GRT+G+I model, analyzin...
<p>Phylogenetic tree inferred from partial 18S rDNA sequences retrieved in this study and the relate...
<p>The bootstrap support values at branching points are listed as maximum likelihood/maximum parsimo...
<p>The tree was constructed using conserved amino acid sequences. The numbers on the nodes indicate ...
<p>Haplotype labels as in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0149...
Fig. 2. ML tree from a 2430 bp sequence of mitochondrial 12S rRNA and 16S rRNA genes for samples of ...
<p>Numbers above branches indicate the bootstrap value (as percentages of 1,000 replications) for NJ...
<p>Numbers at nodes represent posterior probabilities/bootstrap support values from Bayesian Inferen...
Maximum Likelihood tree of the green algae inferred from 18S rRNA sequences with bootstrap values (1...
<p>Representatives of the Pavlovophyceae were used as an out-group. Asterisks refer to the clade nam...
FIGURE 1. Maximum likelihood (ML) tree based on partial sequence of mitochondrial genes (12S rRNA, t...
<p>Maximum likelihood phylogenetic trees using General Time Reversible model of nucleotide substitut...
TREE files obtained in Maximum Likelihood Analyses (modified with FigTree software, http://tree.bio....
FIGURE 2. Bayesian trees of 9729-bp sequence of mtDNA and nuDNA for the species of Meristogenys. Num...
<p>Sequences marked with solid circles are 100% identical to those under GenBank accession numbers A...
FIGURE 1. Maximum Likelihood tree of the Amazophrynella species based on the GRT+G+I model, analyzin...
<p>Phylogenetic tree inferred from partial 18S rDNA sequences retrieved in this study and the relate...
<p>The bootstrap support values at branching points are listed as maximum likelihood/maximum parsimo...
<p>The tree was constructed using conserved amino acid sequences. The numbers on the nodes indicate ...
<p>Haplotype labels as in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0149...
Fig. 2. ML tree from a 2430 bp sequence of mitochondrial 12S rRNA and 16S rRNA genes for samples of ...
<p>Numbers above branches indicate the bootstrap value (as percentages of 1,000 replications) for NJ...
<p>Numbers at nodes represent posterior probabilities/bootstrap support values from Bayesian Inferen...
Maximum Likelihood tree of the green algae inferred from 18S rRNA sequences with bootstrap values (1...
<p>Representatives of the Pavlovophyceae were used as an out-group. Asterisks refer to the clade nam...
FIGURE 1. Maximum likelihood (ML) tree based on partial sequence of mitochondrial genes (12S rRNA, t...
<p>Maximum likelihood phylogenetic trees using General Time Reversible model of nucleotide substitut...
TREE files obtained in Maximum Likelihood Analyses (modified with FigTree software, http://tree.bio....
FIGURE 2. Bayesian trees of 9729-bp sequence of mtDNA and nuDNA for the species of Meristogenys. Num...
<p>Sequences marked with solid circles are 100% identical to those under GenBank accession numbers A...
FIGURE 1. Maximum Likelihood tree of the Amazophrynella species based on the GRT+G+I model, analyzin...