<p>The alignment of three sequences was performed on the Aligment Explorer of MEGA5 using the default settings. The conservation of nucleotides was indicated by an asterisk and dashes indicate gaps. The label on the left-hand side of each sequence gives the sequence name (a representational clone name). The alignment shows CflncRNAs have conserved regions among them (blue filled squares), poly A tails (filled green squares) and poly adenylation signals (AATAAA, green enclosure) at different points of each sequence.</p
- Concatenated nucleotide alignment - Concatenated protein alignment - 1,105 exon alignments (protei...
<p>The alignment was done by the Muscle algorithm [<a href="http://www.plosone.org/article/info:doi/...
To date, few attempts have been made to bench-mark the alignment algorithms upon nucleic acid sequen...
Non-conding RNAs (ncRNAs) are RNA molecules which are transcribed but do not encode proteins. The fu...
<p>Lines superposed over the alignment show the major features obtained experimentally for T7 RNAP. ...
<p>The red dot indicates an RCA<sub>L</sub> in different species, and the red box indicates RCA<sub>...
<p><b>A</b>. The consensus sequence determined by comparing the aligned CNEs of 38 alphabaculoviruse...
High quality sequence alignments of RNA and DNA sequences are a prerequisite for the comparative ana...
In recent years there has been a growing interest in the field of non-coding RNA. This surge is a di...
Thesis (M. Eng.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Compute...
Given a set of homologous protein/DNA/RNA sequences, finding their multiple alignment means arrangin...
<p>A. Alignment of representative X and Y plasmids to pU302S (group A), pSN11/00Kan (group B), and p...
Aligning RNA sequences can be a challenging task. Automatic sequence alignment programs typically al...
Whole genome alignments have become a central tool in biological sequence analy-sis. A major applica...
In this paper, we address the problem of discovering novel non-coding RNA (ncRNA) using primary sequ...
- Concatenated nucleotide alignment - Concatenated protein alignment - 1,105 exon alignments (protei...
<p>The alignment was done by the Muscle algorithm [<a href="http://www.plosone.org/article/info:doi/...
To date, few attempts have been made to bench-mark the alignment algorithms upon nucleic acid sequen...
Non-conding RNAs (ncRNAs) are RNA molecules which are transcribed but do not encode proteins. The fu...
<p>Lines superposed over the alignment show the major features obtained experimentally for T7 RNAP. ...
<p>The red dot indicates an RCA<sub>L</sub> in different species, and the red box indicates RCA<sub>...
<p><b>A</b>. The consensus sequence determined by comparing the aligned CNEs of 38 alphabaculoviruse...
High quality sequence alignments of RNA and DNA sequences are a prerequisite for the comparative ana...
In recent years there has been a growing interest in the field of non-coding RNA. This surge is a di...
Thesis (M. Eng.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Compute...
Given a set of homologous protein/DNA/RNA sequences, finding their multiple alignment means arrangin...
<p>A. Alignment of representative X and Y plasmids to pU302S (group A), pSN11/00Kan (group B), and p...
Aligning RNA sequences can be a challenging task. Automatic sequence alignment programs typically al...
Whole genome alignments have become a central tool in biological sequence analy-sis. A major applica...
In this paper, we address the problem of discovering novel non-coding RNA (ncRNA) using primary sequ...
- Concatenated nucleotide alignment - Concatenated protein alignment - 1,105 exon alignments (protei...
<p>The alignment was done by the Muscle algorithm [<a href="http://www.plosone.org/article/info:doi/...
To date, few attempts have been made to bench-mark the alignment algorithms upon nucleic acid sequen...