<p>(a) Representative experiment of reverse transcription-PCR using XBP1 mRNA as template, from AB8/13 cells transiently expressing <i>COL4A3</i>-WT (A3/WT) or the mutant chains G1334E, G871C, G484R (<i>COL4A3</i>). PCR products were run on 3% agarose gel. It is apparent that over-expression of all chains induces XBP1 splicing, as evidenced by the appearance of the spliced band (s) when the PCR product is cut with the restriction enzyme Pst1. (h) hybrid, (u) unspliced (b) RT-PCR is quantified via densitometric analysis of the bands after PstI digestion as follows: ratio of the spliced band and the sum of the two PstI digest bands (s/(u1+u2), with PstI digestion. Hybrid band (h) was considered as equally contributing to unspliced and spliced...
<p>MDA-MB-231 (left) and MCF-7 cells (right) were treated with CTet or tunicamycin, and total RNA wa...
<p>A, B, D, E) Screen shots from the Integrated Genome Viewer (IGV) comparing RNA-Seq reads obtained...
<p>(<b>A</b>) Western blot analysis of TDP-43 in HeLa and SH-SY5Y cells with or without TDP-43 siRNA...
<p>Quantitative RT-PCR primers discriminating the spliced and unspliced forms of <i>XBP1</i> mRNA we...
<p>A. SH-SY5Y cells were incubated with vehicle or with PQ as described in Material and Methods. The...
<p>A. Graphic representation of pre-mRNA splicing of wild type and mutant (C.1243+2T>A) minigenes of...
<p><b>(A)</b> Schematic representation of the <i>NCF4</i> mini-genes used in the functional splicing...
<p>(A.) The c.474 G→A SNP induces alternative splicing <i>ex vivo</i>. Left panel: PCR fragments con...
<p>(A) NIH-3T3 cells were infected with MCMV at an MOI of 5 or treated with tunicamycin (Tun) for 4 ...
<p><b>A.</b> Schematic of chromosomal wild-type and chimeric <i>RPL18B</i> genes. In the chimera, th...
<p>(<b>A, B</b>) Schematic construction of pSpliceExpress reporter minigene containing exon 9, Wt an...
Ning mutations within core TBA). Cells were treated with buffer (lanes 4 and 6) or with 1 mM theophy...
<p>(A) Representative western analysis of CHOP/GADD153 protein expression in nuclear extracts of VSM...
<p><b>A.</b> RT-PCR analysis of splicing products of the <i>RPL22B</i> pre-mRNA in wild-type and rib...
<p>(A) Schematic of probes contained on the splicing microarray. (B) Splicing profile of single or d...
<p>MDA-MB-231 (left) and MCF-7 cells (right) were treated with CTet or tunicamycin, and total RNA wa...
<p>A, B, D, E) Screen shots from the Integrated Genome Viewer (IGV) comparing RNA-Seq reads obtained...
<p>(<b>A</b>) Western blot analysis of TDP-43 in HeLa and SH-SY5Y cells with or without TDP-43 siRNA...
<p>Quantitative RT-PCR primers discriminating the spliced and unspliced forms of <i>XBP1</i> mRNA we...
<p>A. SH-SY5Y cells were incubated with vehicle or with PQ as described in Material and Methods. The...
<p>A. Graphic representation of pre-mRNA splicing of wild type and mutant (C.1243+2T>A) minigenes of...
<p><b>(A)</b> Schematic representation of the <i>NCF4</i> mini-genes used in the functional splicing...
<p>(A.) The c.474 G→A SNP induces alternative splicing <i>ex vivo</i>. Left panel: PCR fragments con...
<p>(A) NIH-3T3 cells were infected with MCMV at an MOI of 5 or treated with tunicamycin (Tun) for 4 ...
<p><b>A.</b> Schematic of chromosomal wild-type and chimeric <i>RPL18B</i> genes. In the chimera, th...
<p>(<b>A, B</b>) Schematic construction of pSpliceExpress reporter minigene containing exon 9, Wt an...
Ning mutations within core TBA). Cells were treated with buffer (lanes 4 and 6) or with 1 mM theophy...
<p>(A) Representative western analysis of CHOP/GADD153 protein expression in nuclear extracts of VSM...
<p><b>A.</b> RT-PCR analysis of splicing products of the <i>RPL22B</i> pre-mRNA in wild-type and rib...
<p>(A) Schematic of probes contained on the splicing microarray. (B) Splicing profile of single or d...
<p>MDA-MB-231 (left) and MCF-7 cells (right) were treated with CTet or tunicamycin, and total RNA wa...
<p>A, B, D, E) Screen shots from the Integrated Genome Viewer (IGV) comparing RNA-Seq reads obtained...
<p>(<b>A</b>) Western blot analysis of TDP-43 in HeLa and SH-SY5Y cells with or without TDP-43 siRNA...