The column "source ID" presents how each OTU was identified. SAP: Statistical assignment Package; NCBI/BOLD: >97% match to a reference barcode in NCBI and/or BOLD barcode databases; 2mm: match an OTU identified via DNA barcoding in the >2mm fraction; 500μm: match an OTU identified via DNA barcoding in the 2mm-500μm fraction The second sheet lists all OTUs that were discarded because they matched bacterial or non-COI sequences in NCBI
The file contains the taxonomic assignments for reads obtained using mlCOI barcode across all statio...
A matrix of samples by sequences reporting the count of sequence reads for each trnL-P6 sequence in ...
A: OTU table showing the 3334 OTUs identified in the MiSeq analysis of 107 samples analyzed by clust...
This file contains an OTU table from each experiment and identifications for each OTU from Biocode, ...
Number of sequences of each Operational Taxonomic Units (OTUs) recovered from stomach content analys...
This table summarize the number of sequences per Operational Taxonomic Units (OTU) and per sample. O...
The supplementary material contains the BOLD_NCBI_Merger script, the needed folder structure and the...
Metabarcoding and metagenomic approaches are becoming routine techniquesfor use in biodiversity asse...
Table of OTUs (rows) by sample (columns) after bioinformatics pipeline. See "OTUs fasta file" for re...
OTU table (for OTUs picked based on 97% 16S rRNA gene sequence identity) that forms the basis for mo...
otu.fa: a FASTA format file containing the sequences of all of the OTUs generated by the study; map....
Excel-document containing table of operational taxonomic units (OTUs) extracted from wood samples. T...
Contains rows designating the sample ID numbers and forward and reverse barcode ID numbers used for ...
The table presents the number of sequences per OTU and per sample (fish gut). Sequence clustering wa...
The otu table and related processing code for meta-analysis of dilution-to-extinction studies.</p
The file contains the taxonomic assignments for reads obtained using mlCOI barcode across all statio...
A matrix of samples by sequences reporting the count of sequence reads for each trnL-P6 sequence in ...
A: OTU table showing the 3334 OTUs identified in the MiSeq analysis of 107 samples analyzed by clust...
This file contains an OTU table from each experiment and identifications for each OTU from Biocode, ...
Number of sequences of each Operational Taxonomic Units (OTUs) recovered from stomach content analys...
This table summarize the number of sequences per Operational Taxonomic Units (OTU) and per sample. O...
The supplementary material contains the BOLD_NCBI_Merger script, the needed folder structure and the...
Metabarcoding and metagenomic approaches are becoming routine techniquesfor use in biodiversity asse...
Table of OTUs (rows) by sample (columns) after bioinformatics pipeline. See "OTUs fasta file" for re...
OTU table (for OTUs picked based on 97% 16S rRNA gene sequence identity) that forms the basis for mo...
otu.fa: a FASTA format file containing the sequences of all of the OTUs generated by the study; map....
Excel-document containing table of operational taxonomic units (OTUs) extracted from wood samples. T...
Contains rows designating the sample ID numbers and forward and reverse barcode ID numbers used for ...
The table presents the number of sequences per OTU and per sample (fish gut). Sequence clustering wa...
The otu table and related processing code for meta-analysis of dilution-to-extinction studies.</p
The file contains the taxonomic assignments for reads obtained using mlCOI barcode across all statio...
A matrix of samples by sequences reporting the count of sequence reads for each trnL-P6 sequence in ...
A: OTU table showing the 3334 OTUs identified in the MiSeq analysis of 107 samples analyzed by clust...
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