Nonequilibrium molecular dynamics (MD) simulations together with physics-based force fields are used to follow energy flow between vibrationally excited <i>N</i>-methylacetamide (NMA) and water. The simulations are carried out with a previously validated force field for NMA, based on a multipolar representation of the electrostatics, and with a new fluctuating point charge model. For the water solvent, a flexible and a rigid model was employed to distinguish between the role of inter- and intramolecular degrees of freedom. On a 10 ps time scale about 90% of the available energy goes into the solvent. The remaining energy resides within internal NMA-degrees of freedom from where energy flow takes place on longer time scales. The total amount...
In this study, we performed QM/MM molecular dynamics simulations of a simple biomolecular model, N-m...
We extend, via a reformulation in terms of Poisson brackets, the method developed previously (Rey et...
We introduce a nonequilibrium molecular dynamics simulation approach, based on the generalized Lange...
We performed Car-Parrinello molecular dynamics (CPMD) simulations of deuterated aqueous solution of ...
Solvation dynamics in liquid water is addressed via nonequilibrium energy-transfer pathways activate...
We report the vibrational dynamics of amide modes of N-methylformamide (NMF), N-methylacetamide (NMA...
Solvation dynamics in liquid water is addressed via nonequilibrium energy-transfer pathways activate...
The vibrational relaxation of the amide I mode of deuterated <i>N</i>-methylacetamide in D<sub>2</su...
ABSTRACT: Employing extensive quantum-chemical calculations at the DFT/B3LYP and MP2 level, quartic ...
First principles molecular dynamics (FPMD) simulations of relatively dilute aqueous solutions of N-m...
We introduce a nonequilibrium molecular dynamics simulation approach, based on the generalized Lange...
Population transfer between vibrational eigenstates is important for many phenomena in chemistry. In...
We introduce a nonequilibrium molecular dynamics simulation approach, based on the generalized Lange...
The twin questions of how and why protein molecules fold into the specific topologies which enable t...
N,N-Dimethylformamide (DMF) is a unique tertiary amphiphilic amide, where the presence of a hydrophi...
In this study, we performed QM/MM molecular dynamics simulations of a simple biomolecular model, N-m...
We extend, via a reformulation in terms of Poisson brackets, the method developed previously (Rey et...
We introduce a nonequilibrium molecular dynamics simulation approach, based on the generalized Lange...
We performed Car-Parrinello molecular dynamics (CPMD) simulations of deuterated aqueous solution of ...
Solvation dynamics in liquid water is addressed via nonequilibrium energy-transfer pathways activate...
We report the vibrational dynamics of amide modes of N-methylformamide (NMF), N-methylacetamide (NMA...
Solvation dynamics in liquid water is addressed via nonequilibrium energy-transfer pathways activate...
The vibrational relaxation of the amide I mode of deuterated <i>N</i>-methylacetamide in D<sub>2</su...
ABSTRACT: Employing extensive quantum-chemical calculations at the DFT/B3LYP and MP2 level, quartic ...
First principles molecular dynamics (FPMD) simulations of relatively dilute aqueous solutions of N-m...
We introduce a nonequilibrium molecular dynamics simulation approach, based on the generalized Lange...
Population transfer between vibrational eigenstates is important for many phenomena in chemistry. In...
We introduce a nonequilibrium molecular dynamics simulation approach, based on the generalized Lange...
The twin questions of how and why protein molecules fold into the specific topologies which enable t...
N,N-Dimethylformamide (DMF) is a unique tertiary amphiphilic amide, where the presence of a hydrophi...
In this study, we performed QM/MM molecular dynamics simulations of a simple biomolecular model, N-m...
We extend, via a reformulation in terms of Poisson brackets, the method developed previously (Rey et...
We introduce a nonequilibrium molecular dynamics simulation approach, based on the generalized Lange...