Pathways that distinguish the two major clusters of mouse HCC.

Hierarchical clustering of pathways differentially expressed in the subgroups of human HCCs significantly correlated with the three zebrafish tumor signatures.

Weiling Zheng (102342)
Zhen Li (49109)
Anh Tuan Nguyen (535784)
Caixia Li (522464)
Alexander Emelyanov (535785)
Zhiyuan Gong (51844)

March 2014

The color bars represent the logarithm-transformed FDR values. Up-regulated pathways are given po...

Distinct signaling pathways of the MSCs under stimulatory and non-stimulatory conditions.

Jung-Ho Kim (257402)
Ho-Sun Lee (3605294)
Hyun-Kyung Choi (2459596)
Jin-A Kim (3337617)
In-Sun Chu (81623)
Sun-Hee Leem (81627)
Il-Hoan Oh (456853)

December 2016

Three independent lines of hMSCs cultured under different conditions were subjected to microarray...

Enrichment of top 10 biofunctions pathways in brain, liver and spleen of Npc1−/− mice. (A)

Md. Suhail Alam (125639)
Michelle Getz (125640)
Innocent Safeukui (47725)
Sue Yi (125641)
Pamela Tamez (48996)
Jenny Shin (125643)
Peter Velázquez (125645)
Kasturi Haldar (49006)

October 2012

The top 10 biofunctions pathways derived from IPA analyses of differentially expressed genes in t...

Mouse and human HCC clustering.

Itziar Frades (741552)
Erik Andreasson (741553)
Jose Maria Mato (741554)
Erik Alexandersson (741555)
Rune Matthiesen (223502)
Mª Luz Martínez-Chantar (741556)

May 2015

the gene expression data of the human HCC of mixed etiologies has been integrated with HCC sample...

Comparative genomic analysis of human and mouse model HCC.

Jinyu Li (424996)
Maia Chanrion (698420)
Eric Sawey (698421)
Tim Wang (193976)
Edward Chow (698422)
Aaron Tward (698423)
Yi Su (311753)
Wen Xue (698424)
Robert Lucito (66065)
Lars Zender (698425)
Scott W. Lowe (104375)
J. Michael Bishop (60561)
Scott Powers (698426)

March 2015

(A) Frequency plots of copy number alterations in human HCC. Frequency of gains (red) and losses ...

Top 20 pathways identified by Ingenuity Pathway Analysis.

Geoffrey N. Gobert (180959)
Sujeevi K. Nawaratna (737822)
Marina Harvie (737823)
Grant A. Ramm (218541)
Donald P. McManus (172118)

May 2015

From the 48 differentially expressed genes in response to S. japonicum soluble egg ...

Comparison of HCC transcript profiles of Iqgap2−/− mouse model and human HCC.

Dmitri V. Gnatenko (444226)
Xiao Xu (112147)
Wei Zhu (23646)
Valentina A. Schmidt (444227)

August 2013

Cross-species clustering profiles were obtained using comparative functional genomics approach. T...

Gene network and metabolomic enrichment of carbohydrate metabolism in peroxisomal gene networks.

Michael F. Wangler (544124)
Yu-Hsin Chao (4166926)
Vafa Bayat (115381)
Nikolaos Giagtzoglou (2795788)
Abhijit Babaji Shinde (4166923)
Nagireddy Putluri (213565)
Cristian Coarfa (114538)
Taraka Donti (176813)
Brett H. Graham (176844)
Joseph E. Faust (580247)
James A. McNew (375179)
Ann Moser (3563087)
Marco Sardiello (7720)
Myriam Baes (262291)
Hugo J. Bellen (115405)

June 2017

(A) Gene set enrichment analysis (GSEA) of peroxisomal genes in mouse liver networks showing a st...

Ingenuity Pathway Analysis of biological functions of 371 genes that change expression with age in Iqgap2−/− but not in WT livers, leading to the development of HCC.

Dmitri V. Gnatenko (444226)
Xiao Xu (112147)
Wei Zhu (23646)
Valentina A. Schmidt (444227)

August 2013

The top five canonic biological pathways (A), top five associated networks (B) and ...

Pathway and network analysis of 24 metabolites recognized by IPA from the candidates discovered by GC-MS and LC-MS based analyses.

Mohammad R. Nezami Ranjbar (747821)
Yue Luo (728594)
Cristina Di Poto (747822)
Rency S. Varghese (747823)
Alessia Ferrarini (747824)
Chi Zhang (9857)
Naglaa I. Sarhan (747825)
Hanan Soliman (747826)
Mahlet G. Tadesse (226097)
Dina H. Ziada (747827)
Rabindra Roy (747828)
Habtom W. Ressom (250082)

June 2015

A: top 10 canonical pathways based on 24 metabolites. B: network involving 13 out of the 24 metab...

Networks predicted by Ingenuity Pathway Analysis in the Cmah-dKO mice.

Deug-Nam Kwon (630760)
Byung-Soo Chang (630761)
Jin-Hoi Kim (577191)

September 2014

Upper: The common network identified was lipid metabolism and small-molecule biochemistry in the ...

The top 10 genes that were differentially regulated in the HFD and Sal mouse groups.

Myung-Sunny Kim (501276)
Yasuhiko Yamamoto (255813)
Kyungjin Kim (140317)
Nozomu Kamei (501277)
Takeshi Shimada (501278)
Libin Liu (144204)
Kristin Moore (501279)
Ju Rang Woo (501280)
Steven E. Shoelson (474337)
Jongsoon Lee (501281)

December 2013

The top 10 genes that were differentially regulated in the HFD and Sal mouse groups.</p

Top 10 biological functions of hepatic genes significantly improved by β-cryptoxanthin in diet-induced NASH in mice.

Masuko Kobori (208009)
Yinhua Ni (307069)
Yumiko Takahashi (568105)
Natsumi Watanabe (568106)
Minoru Sugiura (292984)
Kazunori Ogawa (292986)
Mayumi Nagashimada (568107)
Shuichi Kaneko (156576)
Shigehiro Naito (53228)
Tsuguhito Ota (307055)

May 2014

(a)Top 10 biological functions of hepatic genes significantly up- or downregulated in NASH (b) To...

Pathways enriched from differentially expressed genes between HCC tissues of high and low NTS expression by PathwayStudio™.

Jinpu Yu (283737)
Xiubao Ren (166422)
Yongzi Chen (283740)
Pengpeng Liu (283741)
Xiyin Wei (283743)
Hui Li (32376)
Guoguang Ying (158659)
Kexin Chen (181385)
Hans Winkler (283744)
Xishan Hao (85794)

February 2013

Pathways enriched from differentially expressed genes between HCC tissues of high and low NTS exp...

The associated genes in the top 5 KEGG pathways significantly altered in diabetic mouse liver.

Fang Zhang (197215)
Xiang Xu (141229)
Yi Zhang (9093)
Ben Zhou (197219)
Zhishui He (197222)
Qiwei Zhai (197225)

March 2013

The associated genes in the top 5 KEGG pathways significantly altered in diabetic mouse liver.</p

Hierarchical clustering of pathways differentially expressed in the subgroups of human HCCs significantly correlated with the three zebrafish tumor signatures.

Weiling Zheng (102342)
Zhen Li (49109)
Anh Tuan Nguyen (535784)
Caixia Li (522464)
Alexander Emelyanov (535785)
Zhiyuan Gong (51844)

March 2014

The color bars represent the logarithm-transformed FDR values. Up-regulated pathways are given po...

Distinct signaling pathways of the MSCs under stimulatory and non-stimulatory conditions.

Jung-Ho Kim (257402)
Ho-Sun Lee (3605294)
Hyun-Kyung Choi (2459596)
Jin-A Kim (3337617)
In-Sun Chu (81623)
Sun-Hee Leem (81627)
Il-Hoan Oh (456853)

December 2016

Three independent lines of hMSCs cultured under different conditions were subjected to microarray...

Enrichment of top 10 biofunctions pathways in brain, liver and spleen of Npc1−/− mice. (A)

Md. Suhail Alam (125639)
Michelle Getz (125640)
Innocent Safeukui (47725)
Sue Yi (125641)
Pamela Tamez (48996)
Jenny Shin (125643)
Peter Velázquez (125645)
Kasturi Haldar (49006)

October 2012

The top 10 biofunctions pathways derived from IPA analyses of differentially expressed genes in t...

Mouse and human HCC clustering.

Itziar Frades (741552)
Erik Andreasson (741553)
Jose Maria Mato (741554)
Erik Alexandersson (741555)
Rune Matthiesen (223502)
Mª Luz Martínez-Chantar (741556)

May 2015

the gene expression data of the human HCC of mixed etiologies has been integrated with HCC sample...

Comparative genomic analysis of human and mouse model HCC.

Jinyu Li (424996)
Maia Chanrion (698420)
Eric Sawey (698421)
Tim Wang (193976)
Edward Chow (698422)
Aaron Tward (698423)
Yi Su (311753)
Wen Xue (698424)
Robert Lucito (66065)
Lars Zender (698425)
Scott W. Lowe (104375)
J. Michael Bishop (60561)
Scott Powers (698426)

March 2015

(A) Frequency plots of copy number alterations in human HCC. Frequency of gains (red) and losses ...

Top 20 pathways identified by Ingenuity Pathway Analysis.

Geoffrey N. Gobert (180959)
Sujeevi K. Nawaratna (737822)
Marina Harvie (737823)
Grant A. Ramm (218541)
Donald P. McManus (172118)

May 2015

From the 48 differentially expressed genes in response to S. japonicum soluble egg ...

Comparison of HCC transcript profiles of Iqgap2−/− mouse model and human HCC.

Dmitri V. Gnatenko (444226)
Xiao Xu (112147)
Wei Zhu (23646)
Valentina A. Schmidt (444227)

August 2013

Cross-species clustering profiles were obtained using comparative functional genomics approach. T...

Gene network and metabolomic enrichment of carbohydrate metabolism in peroxisomal gene networks.

Michael F. Wangler (544124)
Yu-Hsin Chao (4166926)
Vafa Bayat (115381)
Nikolaos Giagtzoglou (2795788)
Abhijit Babaji Shinde (4166923)
Nagireddy Putluri (213565)
Cristian Coarfa (114538)
Taraka Donti (176813)
Brett H. Graham (176844)
Joseph E. Faust (580247)
James A. McNew (375179)
Ann Moser (3563087)
Marco Sardiello (7720)
Myriam Baes (262291)
Hugo J. Bellen (115405)

June 2017

(A) Gene set enrichment analysis (GSEA) of peroxisomal genes in mouse liver networks showing a st...

Ingenuity Pathway Analysis of biological functions of 371 genes that change expression with age in Iqgap2−/− but not in WT livers, leading to the development of HCC.

Dmitri V. Gnatenko (444226)
Xiao Xu (112147)
Wei Zhu (23646)
Valentina A. Schmidt (444227)

August 2013

The top five canonic biological pathways (A), top five associated networks (B) and ...

Pathway and network analysis of 24 metabolites recognized by IPA from the candidates discovered by GC-MS and LC-MS based analyses.

Mohammad R. Nezami Ranjbar (747821)
Yue Luo (728594)
Cristina Di Poto (747822)
Rency S. Varghese (747823)
Alessia Ferrarini (747824)
Chi Zhang (9857)
Naglaa I. Sarhan (747825)
Hanan Soliman (747826)
Mahlet G. Tadesse (226097)
Dina H. Ziada (747827)
Rabindra Roy (747828)
Habtom W. Ressom (250082)

June 2015

A: top 10 canonical pathways based on 24 metabolites. B: network involving 13 out of the 24 metab...

Networks predicted by Ingenuity Pathway Analysis in the Cmah-dKO mice.

Deug-Nam Kwon (630760)
Byung-Soo Chang (630761)
Jin-Hoi Kim (577191)

September 2014

Upper: The common network identified was lipid metabolism and small-molecule biochemistry in the ...

The top 10 genes that were differentially regulated in the HFD and Sal mouse groups.

Myung-Sunny Kim (501276)
Yasuhiko Yamamoto (255813)
Kyungjin Kim (140317)
Nozomu Kamei (501277)
Takeshi Shimada (501278)
Libin Liu (144204)
Kristin Moore (501279)
Ju Rang Woo (501280)
Steven E. Shoelson (474337)
Jongsoon Lee (501281)

December 2013

The top 10 genes that were differentially regulated in the HFD and Sal mouse groups.</p

Top 10 biological functions of hepatic genes significantly improved by β-cryptoxanthin in diet-induced NASH in mice.

Masuko Kobori (208009)
Yinhua Ni (307069)
Yumiko Takahashi (568105)
Natsumi Watanabe (568106)
Minoru Sugiura (292984)
Kazunori Ogawa (292986)
Mayumi Nagashimada (568107)
Shuichi Kaneko (156576)
Shigehiro Naito (53228)
Tsuguhito Ota (307055)

May 2014

(a)Top 10 biological functions of hepatic genes significantly up- or downregulated in NASH (b) To...

Pathways enriched from differentially expressed genes between HCC tissues of high and low NTS expression by PathwayStudio™.

Jinpu Yu (283737)
Xiubao Ren (166422)
Yongzi Chen (283740)
Pengpeng Liu (283741)
Xiyin Wei (283743)
Hui Li (32376)
Guoguang Ying (158659)
Kexin Chen (181385)
Hans Winkler (283744)
Xishan Hao (85794)

February 2013

Pathways enriched from differentially expressed genes between HCC tissues of high and low NTS exp...

The associated genes in the top 5 KEGG pathways significantly altered in diabetic mouse liver.

Fang Zhang (197215)
Xiang Xu (141229)
Yi Zhang (9093)
Ben Zhou (197219)
Zhishui He (197222)
Qiwei Zhai (197225)

March 2013

The associated genes in the top 5 KEGG pathways significantly altered in diabetic mouse liver.</p

Hierarchical clustering of pathways differentially expressed in the subgroups of human HCCs significantly correlated with the three zebrafish tumor signatures.

Weiling Zheng (102342)
Zhen Li (49109)
Anh Tuan Nguyen (535784)
Caixia Li (522464)
Alexander Emelyanov (535785)
Zhiyuan Gong (51844)

March 2014

The color bars represent the logarithm-transformed FDR values. Up-regulated pathways are given po...

Distinct signaling pathways of the MSCs under stimulatory and non-stimulatory conditions.

Jung-Ho Kim (257402)
Ho-Sun Lee (3605294)
Hyun-Kyung Choi (2459596)
Jin-A Kim (3337617)
In-Sun Chu (81623)
Sun-Hee Leem (81627)
Il-Hoan Oh (456853)

December 2016

Three independent lines of hMSCs cultured under different conditions were subjected to microarray...

Enrichment of top 10 biofunctions pathways in brain, liver and spleen of Npc1−/− mice. (A)

Md. Suhail Alam (125639)
Michelle Getz (125640)
Innocent Safeukui (47725)
Sue Yi (125641)
Pamela Tamez (48996)
Jenny Shin (125643)
Peter Velázquez (125645)
Kasturi Haldar (49006)

October 2012

The top 10 biofunctions pathways derived from IPA analyses of differentially expressed genes in t...

Pathways that distinguish the two major clusters of mouse HCC.

Abstract

Extracted data

Pathways that distinguish the two major clusters of mouse HCC.

Abstract

Extracted data

Related items

Related items