<p>A non-redundant set of partial <i>ospC</i> sequences according to BAFK78_B0019 bp 97–583, comprising 59 <i>B</i>. <i>afzelii</i> strains and the sequence of <i>B</i>. <i>burgdorferi</i> B31 as external root reference were included in the analyses. A: Maximum likelihood tree representation, re-rooted with <i>B</i>. <i>burgdorferi</i> B31 as outgroup. Clusters containing strains attributed to human infectivity are boxed, of which the previously identified groups were labelled A1–A8. The strains compared in this study are highlighted in blue. B: A recombination network representation is shown for the sequences in an unrooted distance phylogram. The pairwise homoplasy index test for the <i>B</i>. <i>afzelii</i> sequences (p = 7.8x10<sup>-15<...
<p>Both heat-plots of the similarity matrices and trees created from the same data are shown. <b>A</...
This is the alignment file for the tree that shows the relationships of a number of Borrelia strains...
<p>A phylogenetic tree was constructed from multiple alignment of the core genome SNPs of the 6 isol...
Many microorganisms exhibit high levels of intragenic recombination following horizontal gene transf...
<p>The accession numbers are given in <a href="http://www.plosone.org/article/info:doi/10.1371/journ...
<p>117 full-length EVD68 VP1 sequences were used for the re-construction of the Neighbor-Joining tre...
<p>(<b>A</b>) Network diagram of all 1,229 sequenced isolates that could be assigned to one of 78 cl...
A dendrogram based on genic differences among the 13 strains of . While several pairs of strains app...
<p>The rRNAs (marked red), are presented with transcription from right to left as located on the chr...
<p>Successive variants are colour coded and prototype stains are listed chronologically with earlies...
<p>Genome recombination analysis of the pBRGX strain versus the reference subtype strains obtained f...
a<p>Subspecies based on phylogenetic analysis (<a href="http://www.plosone.org/article/info:doi/10.1...
<p>The left figures (A–C) show the results for the VP1 region while the right figures (D–F) show the...
<p>The maximum likelihood phylogeny was inferred from the concatenated protein alignment of 2,374 si...
<p>A. Relationship between <i>Gallibacterium anatis</i>, <i>Mannheimia haemolytica</i>, <i>Pasteurel...
<p>Both heat-plots of the similarity matrices and trees created from the same data are shown. <b>A</...
This is the alignment file for the tree that shows the relationships of a number of Borrelia strains...
<p>A phylogenetic tree was constructed from multiple alignment of the core genome SNPs of the 6 isol...
Many microorganisms exhibit high levels of intragenic recombination following horizontal gene transf...
<p>The accession numbers are given in <a href="http://www.plosone.org/article/info:doi/10.1371/journ...
<p>117 full-length EVD68 VP1 sequences were used for the re-construction of the Neighbor-Joining tre...
<p>(<b>A</b>) Network diagram of all 1,229 sequenced isolates that could be assigned to one of 78 cl...
A dendrogram based on genic differences among the 13 strains of . While several pairs of strains app...
<p>The rRNAs (marked red), are presented with transcription from right to left as located on the chr...
<p>Successive variants are colour coded and prototype stains are listed chronologically with earlies...
<p>Genome recombination analysis of the pBRGX strain versus the reference subtype strains obtained f...
a<p>Subspecies based on phylogenetic analysis (<a href="http://www.plosone.org/article/info:doi/10.1...
<p>The left figures (A–C) show the results for the VP1 region while the right figures (D–F) show the...
<p>The maximum likelihood phylogeny was inferred from the concatenated protein alignment of 2,374 si...
<p>A. Relationship between <i>Gallibacterium anatis</i>, <i>Mannheimia haemolytica</i>, <i>Pasteurel...
<p>Both heat-plots of the similarity matrices and trees created from the same data are shown. <b>A</...
This is the alignment file for the tree that shows the relationships of a number of Borrelia strains...
<p>A phylogenetic tree was constructed from multiple alignment of the core genome SNPs of the 6 isol...