Functional characterisation of SNPs, pseudogenes and small indels in ST313 populations.

<p>A. Functional characterisation of non-synonymous (black bars) and synonymous (grey bars) of SNPs in lineages I and II. x-axis shows functional categories used for SNP characterisations; y-axis shows proportion of mutated genes (%) to the no of genes belonging to the functional categories. <b>B</b>. Functional characterisation of degraded gene complement (pseudogenes and deletions) in lineage I (blue bars) and lineage II (red bars). x-axis represents % proportion of pseudogenes in each functional group. Asterisks indicate significantly over-represented group with <i>p</i> < 0.05 using a two-way ANOVA with post-tests performed using the Bonferroni method.