<p><sup>1</sup>Only isolates with known international PCR ribotype nomenclature was included in the analysis (n = 443). Values were calculated using the online tool at <a href="http://darwin.phyloviz.net/ComparingPartitions/index.php?link=Home" target="_blank">http://darwin.phyloviz.net/ComparingPartitions/index.php?link=Home</a></p><p>Simpson’s index of diversity and Wallace coefficients of PCR ribotyping and HMW typing.</p
<p>θ<sub><i>k</i></sub>, average number of nucleotide differences; θ<sub><i>H</i></sub>, haplotype d...
<p>Sampling localities, phylogroup, sample sizes (<i>N</i>), haplotypes and their frequencies, gene ...
<p><b><i>S</i></b>: number of polymorphic sites. <b><i>π</i></b>: nucleotide diversity. <b><i>k</i><...
<p>Abbreviations are number of isolates examined (N), segregating sites (S), number of haplotypes (H...
<p>Distribution of PCR ribotypes (A) and HMW types (B) for the isolates analyzed in this study</p
Shows the Simpson diversity index, evenness, and number of ribotypes (taxa) for each sample in the q...
<p>Simpson’s Index of Diversity (1-D) of isolates from different categories (country and host specie...
<p>Diversity indices for all samples including number of individuals (N), number of segregating site...
<p>Genetic diversity (Nei, 1987) of 328 <i>V</i>. <i>cholerae</i> isolates, considering six loci, wa...
<p>Simpson's Diversity index (<i>DI</i>) of PCR/ESI-MS, rep-PCR and the combination of PCR/ESI-MS an...
1<p><i>A. phagocytophilum</i> strains from ticks were excluded. Only typeable strains with data for ...
<p>Calculation of Simpson's Index of Diversity for serotyping (Quellung), MLST, MLVA1, MLVA2 and MLV...
<p>Distribution of phylotypes defined at 97% sequence similarity threshold Numbers in parentheses in...
<p>N = n° of sequences; S = n° of polymorphic sites; H = n° of haplotypes; H<sub>d</sub> = haplotype...
As explained in the Methods, only samples with all SNP successfully genotyped were included in the a...
<p>θ<sub><i>k</i></sub>, average number of nucleotide differences; θ<sub><i>H</i></sub>, haplotype d...
<p>Sampling localities, phylogroup, sample sizes (<i>N</i>), haplotypes and their frequencies, gene ...
<p><b><i>S</i></b>: number of polymorphic sites. <b><i>π</i></b>: nucleotide diversity. <b><i>k</i><...
<p>Abbreviations are number of isolates examined (N), segregating sites (S), number of haplotypes (H...
<p>Distribution of PCR ribotypes (A) and HMW types (B) for the isolates analyzed in this study</p
Shows the Simpson diversity index, evenness, and number of ribotypes (taxa) for each sample in the q...
<p>Simpson’s Index of Diversity (1-D) of isolates from different categories (country and host specie...
<p>Diversity indices for all samples including number of individuals (N), number of segregating site...
<p>Genetic diversity (Nei, 1987) of 328 <i>V</i>. <i>cholerae</i> isolates, considering six loci, wa...
<p>Simpson's Diversity index (<i>DI</i>) of PCR/ESI-MS, rep-PCR and the combination of PCR/ESI-MS an...
1<p><i>A. phagocytophilum</i> strains from ticks were excluded. Only typeable strains with data for ...
<p>Calculation of Simpson's Index of Diversity for serotyping (Quellung), MLST, MLVA1, MLVA2 and MLV...
<p>Distribution of phylotypes defined at 97% sequence similarity threshold Numbers in parentheses in...
<p>N = n° of sequences; S = n° of polymorphic sites; H = n° of haplotypes; H<sub>d</sub> = haplotype...
As explained in the Methods, only samples with all SNP successfully genotyped were included in the a...
<p>θ<sub><i>k</i></sub>, average number of nucleotide differences; θ<sub><i>H</i></sub>, haplotype d...
<p>Sampling localities, phylogroup, sample sizes (<i>N</i>), haplotypes and their frequencies, gene ...
<p><b><i>S</i></b>: number of polymorphic sites. <b><i>π</i></b>: nucleotide diversity. <b><i>k</i><...