<p>(A) Electrophoretic mobility shift assay of <sup>32</sup>P-labeled <i>hrpX</i> promoter and purified HrpG and HrpG-R210C. Numbers in the top of the lanes indicate pmoles of protein added to the assay. (B) Complex competition assays with excess unlabeled DNA: Lanes labeled (-) show the complex between HrpG (left panel) and HrpG-R210C (right panel) with 8 pmol of protein. Competition was performed using the ratio indicated in each lane. (C) EMSA of <sup>32</sup>P-labeled <i>hrpX</i> promoter and a mixture 1:1 of HrpG and HrpG-R210C with the total pmol indicated on top of each lane. (D) Control EMSA of <sup>32</sup>P-labeled <i>hrpX</i> promoter and purified Trx in the same conditions as HrpG to discard unspecific interactions. Lane 1 shows...
<p>Successive increases of MtrR-MBP incubated with 10 ng <i>mtrCDE</i> (A) or <i>nadA</i> (B) promot...
<div><p>(A) Gel shift analysis of MogR binding to the flaA promoter region. Radiolabeled flaA promot...
<p>(A) To identify DNA-protein interaction an electrophoretic mobility shift assay was performed usi...
<p>(A) Binding of Irr to the promoter region of <i>mbfA</i> (180 bp). All reactions contain the same...
<p>(A). ChIP_qPCR experiments to test enrichment of DNA fragments at putative HrpL binding sites. Va...
<p>The HRP signals (bars) are expressed as percentages of the fully cognate positive control (40-mer...
<p>(A) In vitro binding of CovR to the promoter of SMU.1882. EMSA was performed with His-tagged CovR...
A. EMSAs with purified Rex protein and promoter DNA fragments from the adhE, rex, ldh, gbs0609, purC...
<p>(<b>A</b>) ChIP assays <i>in </i><i>vivo</i>. Anti-SAV576 antibodies were used to immunoprecipita...
(A and B) Rv0500A binds directly to the rv2390c promoter but not the kdpF promoter. Electrophoretic ...
<p>(A) Successive increases of FarR-MBP incubated with 10 ng <i>nadA</i> promoter region to assess b...
<p>(<b>A</b>). EMSA competition experiments performed with labeled Pf-tRNA<sup>Trp</sup> and 5 µM of...
<p>The binding assays were performed in the presence of 200(lanes 2–4, lanes 6–8, lanes 10–12) and 0...
<p>(A) Electrophoretic mobility shift assays carried out with a DNA fragment carrying the <i>pbgP</i...
<p>(A) Positions of W-boxes (TGAC, grey bars) in the sense (above the line) and anti-sense strand (b...
<p>Successive increases of MtrR-MBP incubated with 10 ng <i>mtrCDE</i> (A) or <i>nadA</i> (B) promot...
<div><p>(A) Gel shift analysis of MogR binding to the flaA promoter region. Radiolabeled flaA promot...
<p>(A) To identify DNA-protein interaction an electrophoretic mobility shift assay was performed usi...
<p>(A) Binding of Irr to the promoter region of <i>mbfA</i> (180 bp). All reactions contain the same...
<p>(A). ChIP_qPCR experiments to test enrichment of DNA fragments at putative HrpL binding sites. Va...
<p>The HRP signals (bars) are expressed as percentages of the fully cognate positive control (40-mer...
<p>(A) In vitro binding of CovR to the promoter of SMU.1882. EMSA was performed with His-tagged CovR...
A. EMSAs with purified Rex protein and promoter DNA fragments from the adhE, rex, ldh, gbs0609, purC...
<p>(<b>A</b>) ChIP assays <i>in </i><i>vivo</i>. Anti-SAV576 antibodies were used to immunoprecipita...
(A and B) Rv0500A binds directly to the rv2390c promoter but not the kdpF promoter. Electrophoretic ...
<p>(A) Successive increases of FarR-MBP incubated with 10 ng <i>nadA</i> promoter region to assess b...
<p>(<b>A</b>). EMSA competition experiments performed with labeled Pf-tRNA<sup>Trp</sup> and 5 µM of...
<p>The binding assays were performed in the presence of 200(lanes 2–4, lanes 6–8, lanes 10–12) and 0...
<p>(A) Electrophoretic mobility shift assays carried out with a DNA fragment carrying the <i>pbgP</i...
<p>(A) Positions of W-boxes (TGAC, grey bars) in the sense (above the line) and anti-sense strand (b...
<p>Successive increases of MtrR-MBP incubated with 10 ng <i>mtrCDE</i> (A) or <i>nadA</i> (B) promot...
<div><p>(A) Gel shift analysis of MogR binding to the flaA promoter region. Radiolabeled flaA promot...
<p>(A) To identify DNA-protein interaction an electrophoretic mobility shift assay was performed usi...