<p>Chao 1 richness estimate (a) and Shannon index (b) is shown at the y axis and test subjects are shown at the x axis. The blue, green and red bands indicate healthy test subjects, IBS and IBD patients respectively. Only test subjects (17/28) with a complete set of samples (5 different sampling and storage methods) available for analysis are shown. *p<0.01 compared with -80°C as determined by the wilcoxon signed rank test.</p
A: Alpha diversity box-plots showing Chao1 richness estimates per sample group. *Significant at P P ...
The observed OTUs (1a,1b) and the Shannon index (1c, 1d) in the sample groups of CG1st, CG2nd, CG3rd...
Figure S1: Alpha diversity in baseline vs. long-term samples Shannon index compared between the base...
<p>Median and range are shown in the table. (*p<0.05 compared to -80°C).</p><p>Effect of sampling an...
<p>Alpha-diversity, measured by observed species and Shannon diversity Index is plotted for patients...
The distribution of ChaoI diversity index was presented between groups (A, control, low and high tcd...
<p>Rarefaction plots for samples from trial 1 (red), trial 2 (green) and trial 3 (blue), based on Ch...
<p>Alpha diversity indexes were calculated in QIIME from rarefied samples using the Chao1 index and ...
<p>The number of observed OTUs (Fig 3a), Chao1 richness estimator (Fig 3b), Simpson’s evenness measu...
<p>The Shannon index (left panel) and Chao1 index (right panel) were computed for all 121 subjects. ...
<p>regression model showing the increase in individual diversity indices over time from 3 to 24 mont...
<p>Chao1 and Shannon indices were used to determine the richness and diversity of the bacterial comm...
Alpha diversity calculated by five different methods, from left to right: Shannon Index, Simpson, in...
<p>The black dotted line represents the Shannon diversity of the fecal sample used to inoculate the ...
A) The richness (observed index) differences between weaners at t0 and pups at R, p = 0.004. b) The ...
A: Alpha diversity box-plots showing Chao1 richness estimates per sample group. *Significant at P P ...
The observed OTUs (1a,1b) and the Shannon index (1c, 1d) in the sample groups of CG1st, CG2nd, CG3rd...
Figure S1: Alpha diversity in baseline vs. long-term samples Shannon index compared between the base...
<p>Median and range are shown in the table. (*p<0.05 compared to -80°C).</p><p>Effect of sampling an...
<p>Alpha-diversity, measured by observed species and Shannon diversity Index is plotted for patients...
The distribution of ChaoI diversity index was presented between groups (A, control, low and high tcd...
<p>Rarefaction plots for samples from trial 1 (red), trial 2 (green) and trial 3 (blue), based on Ch...
<p>Alpha diversity indexes were calculated in QIIME from rarefied samples using the Chao1 index and ...
<p>The number of observed OTUs (Fig 3a), Chao1 richness estimator (Fig 3b), Simpson’s evenness measu...
<p>The Shannon index (left panel) and Chao1 index (right panel) were computed for all 121 subjects. ...
<p>regression model showing the increase in individual diversity indices over time from 3 to 24 mont...
<p>Chao1 and Shannon indices were used to determine the richness and diversity of the bacterial comm...
Alpha diversity calculated by five different methods, from left to right: Shannon Index, Simpson, in...
<p>The black dotted line represents the Shannon diversity of the fecal sample used to inoculate the ...
A) The richness (observed index) differences between weaners at t0 and pups at R, p = 0.004. b) The ...
A: Alpha diversity box-plots showing Chao1 richness estimates per sample group. *Significant at P P ...
The observed OTUs (1a,1b) and the Shannon index (1c, 1d) in the sample groups of CG1st, CG2nd, CG3rd...
Figure S1: Alpha diversity in baseline vs. long-term samples Shannon index compared between the base...