<p>Panel A): First row- frequency distribution (bin size = 0.1) of mRNAs (<i>n</i> = 440 mRNAs) at 10 min shows a unimodal to bimodal change around critical point (0.090 <<i>nrmsf</i>< 0.092). The <i>x</i>-axis represents the natural log of mRNA expression, <i>ln</i>(<i>ε</i>(10min)) for a specific range of <i>nrmsf</i>: unimodal (left panel: 0.105 <<i>nrmsf</i>< 0.109), flattened unimodal (middle panel: 0.090 <<i>nrmsf</i>< 0.092), and bimodal (right panel: 0.084 <<i>nrmsf</i>< 0.086). The y-axis represents frequency of expression. Second row- the corresponding probability density profile in the regulatory space—expression vs. expression change in log scale with probability density (color bars) confirms the unimodal to bimodal transition t...
Figure S1 Average relative frameshifted sequence length, l, across within relative gene length. Aver...
<p>The putative genetic energy potential (15 min: blue; 20 min: red) with a fixed change in the expr...
<p>Panel (a) shows the exponential lifetime density (red) defined in (1) and the gamma density wit...
<p>Panel A): super-critical state, Panel B): sub-critical state for barcode genes. The panels presen...
<p>(<b>A</b>) Distributions of gene expression levels (D<sub>EXN</sub>), mRNA synthesis rates (D<sub...
<p>Whole mRNA expression (unit: mRNA) and barcode genes (unit: barcode gene; refer to the main text)...
<p>a) mRNA mean and variance in <i>S. cerevisiae</i> plotted against each other in log-scale. Blue d...
<p>(A) Boxplot showing the distributions of half-lives for mRNAs (left), ncRNAs (middle) and introns...
<p>Criticality of the whole expression at 10–15 min of MCF-7 cell stimulated by HRG exhibits three d...
<p>(A) Distribution of fold changes in gene expression (<i>y-axis</i>, log<sub>2</sub> scale) for ge...
<p>(A,C) Mean mRNA free amount (R) and protein amount (P) for two different sets of parameters, as a...
<p>A) <b>The same cell types</b>: Left panels: a near-unity Pearson correlation, <i>r</i>, in whole ...
BACKGROUND:The underlying mechanism of dynamic control of the genome-wide expression is a fundamenta...
Tions and compared to observed data. The experimental log intensity ratio distribution (broad green ...
<p>A) Genes of critical phases are mapped into a human chromosome (UCSC hg19), corrected for the mul...
Figure S1 Average relative frameshifted sequence length, l, across within relative gene length. Aver...
<p>The putative genetic energy potential (15 min: blue; 20 min: red) with a fixed change in the expr...
<p>Panel (a) shows the exponential lifetime density (red) defined in (1) and the gamma density wit...
<p>Panel A): super-critical state, Panel B): sub-critical state for barcode genes. The panels presen...
<p>(<b>A</b>) Distributions of gene expression levels (D<sub>EXN</sub>), mRNA synthesis rates (D<sub...
<p>Whole mRNA expression (unit: mRNA) and barcode genes (unit: barcode gene; refer to the main text)...
<p>a) mRNA mean and variance in <i>S. cerevisiae</i> plotted against each other in log-scale. Blue d...
<p>(A) Boxplot showing the distributions of half-lives for mRNAs (left), ncRNAs (middle) and introns...
<p>Criticality of the whole expression at 10–15 min of MCF-7 cell stimulated by HRG exhibits three d...
<p>(A) Distribution of fold changes in gene expression (<i>y-axis</i>, log<sub>2</sub> scale) for ge...
<p>(A,C) Mean mRNA free amount (R) and protein amount (P) for two different sets of parameters, as a...
<p>A) <b>The same cell types</b>: Left panels: a near-unity Pearson correlation, <i>r</i>, in whole ...
BACKGROUND:The underlying mechanism of dynamic control of the genome-wide expression is a fundamenta...
Tions and compared to observed data. The experimental log intensity ratio distribution (broad green ...
<p>A) Genes of critical phases are mapped into a human chromosome (UCSC hg19), corrected for the mul...
Figure S1 Average relative frameshifted sequence length, l, across within relative gene length. Aver...
<p>The putative genetic energy potential (15 min: blue; 20 min: red) with a fixed change in the expr...
<p>Panel (a) shows the exponential lifetime density (red) defined in (1) and the gamma density wit...