The overlap of MethylMiner and MethylCap with local CpG density.
- Karolina A. Aberg (770869)
- Linying Xie (770870)
- Robin F. Chan (770871)
- Min Zhao (66793)
- Ashutosh K. Pandey (522013)
- Gaurav Kumar (344052)
- Shaunna L. Clark (279831)
- Edwin J. C. G. van den Oord (189900)
Publication date
July 2015
DOIAbstract
<p>The local CpG density is plotted against the percentage CpG coverage. The distribution of the local CpG density in the reference sequence is the highest outside of CpG-rich regions. Better coverage of the regions where the majority of CpGs occur (in the range of 1–7 CpGs) is obtained with MethylMiner than with MethylCap.</p
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