<p><b>a)</b> Maximum likelihood tree inferred from the 190 concatenated group O sequences, with white diamonds at nodes with bootstrap values >70 and colours highlighting the nature of the residue at position 181 in the Reverse Transcriptase: Pink = C (N = 116); Green = Y (N = 71); Blue = mixed Y and C (N = 3); Grey = sequences from patients non NNRTI-naïve or with no data about NNRTI treatment. <b>b)</b> Maximum likelihood tree inferred from the 190 concatenated group M sequences.</p
<p>The numbering for the HIV-1 fragment A, B1, B2 and C sequences corresponds to the HXB2 reference ...
<p>The ML was constructed by PhyML 3.0.1 and visualized in FigTree. The tree is rooted with the HIV-...
<p>ML trees where obtained with the ML method using the best fitting nucleotide substitution model. ...
<p>A: Phylogenetic tree from concatenated regions assigned as subtype B from the BF1 recombinant iso...
<p>HIV-1 sequences were obtained using the Siemens' TRUGENE HIV-1 Genotype Test, analyzed using MegA...
<p>Phylogenetic tree constructed based on HIV-1 partial <i>pol</i> fragment (1060bp) obtained from p...
Phylogenetic tree constructed from consensus fasta files by Maximum-likelihood estimation using the ...
<p>Circular tree: Maximum likelihood tree generated as described under Methods section. The sequence...
<p>A neighbour-joining phylogenetic tree <a href="http://www.plosone.org/article/info:doi/10.1371/jo...
<p>The ML tree was constructed by PhyML 3.0.1 and visualized in FigTree. HIV-1 group N sequence was ...
<p>Shown are the maximum-likelihood phylogenies of viral nucleotide sequences from the Gag and Vif g...
<p>Footnote figure: The phylogenetic inferences were performed by the Neighbor-Joining algorithm und...
<p>(A) Neighbor-joining phylogenetic trees constructed using population (Sanger) sequencing of 105-b...
<p>The upper panel shows the complete tree, which includes sequences from 605 study subjects, 194 MS...
<p>The phylogenetic trees of Env-V3, Vpr, Tat, and LTR sequences were inferred by utilizing the maxi...
<p>The numbering for the HIV-1 fragment A, B1, B2 and C sequences corresponds to the HXB2 reference ...
<p>The ML was constructed by PhyML 3.0.1 and visualized in FigTree. The tree is rooted with the HIV-...
<p>ML trees where obtained with the ML method using the best fitting nucleotide substitution model. ...
<p>A: Phylogenetic tree from concatenated regions assigned as subtype B from the BF1 recombinant iso...
<p>HIV-1 sequences were obtained using the Siemens' TRUGENE HIV-1 Genotype Test, analyzed using MegA...
<p>Phylogenetic tree constructed based on HIV-1 partial <i>pol</i> fragment (1060bp) obtained from p...
Phylogenetic tree constructed from consensus fasta files by Maximum-likelihood estimation using the ...
<p>Circular tree: Maximum likelihood tree generated as described under Methods section. The sequence...
<p>A neighbour-joining phylogenetic tree <a href="http://www.plosone.org/article/info:doi/10.1371/jo...
<p>The ML tree was constructed by PhyML 3.0.1 and visualized in FigTree. HIV-1 group N sequence was ...
<p>Shown are the maximum-likelihood phylogenies of viral nucleotide sequences from the Gag and Vif g...
<p>Footnote figure: The phylogenetic inferences were performed by the Neighbor-Joining algorithm und...
<p>(A) Neighbor-joining phylogenetic trees constructed using population (Sanger) sequencing of 105-b...
<p>The upper panel shows the complete tree, which includes sequences from 605 study subjects, 194 MS...
<p>The phylogenetic trees of Env-V3, Vpr, Tat, and LTR sequences were inferred by utilizing the maxi...
<p>The numbering for the HIV-1 fragment A, B1, B2 and C sequences corresponds to the HXB2 reference ...
<p>The ML was constructed by PhyML 3.0.1 and visualized in FigTree. The tree is rooted with the HIV-...
<p>ML trees where obtained with the ML method using the best fitting nucleotide substitution model. ...