ML gene trees (inferred in RAxML) for each of the 277 enriched loci. The gene trees are unlabeled, but they are in precisely the same order as other files (descending locus length), hence line 1 contains the tree for Locus 1, and line 277 contains the tree for Locus 278 (Locus 4 is again omitted, hence the numbering discrepancy). Gene tree labels refer to specimen voucher numbers
Single .tre file containing all 130 nuclear gene trees reduced to 8 major lineages. Inferred using R...
Supplemental data delineating the identifiers of each of the genes referenced in the phylogenetic tr...
The zip file contains all the bootstrap gene files. There are 199 files (one for each gene) with 50...
ML gene trees (inferred in RAxML) for each of the 277 enriched loci. The gene trees are unlabeled, b...
All 277 analyzed gene trees as inferred in RAxML. The loci are labeled and arranged by descending or...
Gene trees based on supercontigs (exons plus introns) alignments obtained via the RAxML with 200 bo...
Obtained using RAxML v8.2.1 under the model that minimizes the BIC for each loci. Individual gene se...
All gene trees generated and used. Includes raw unsmoothed gene trees, and those smoothed using bran...
Zip file containing individual gene trees estimated via RAxML for all genes used in this study
<p>Support values for ML, BI and MP are provided at the nodes. A branch with dotted end indicated a ...
Newick tree file containing gene trees estimated from individual loci with complete taxon occupancy....
Maximum likelihood (ML) trees for each sequence capture gene used for species tree analyses. ML anal...
Zip folder containing all 378 estimated gene trees using mrbayes. The gene trees were used for ASTRA...
<p>The trees are maximum-likelihood topologies with branches coloured to indicate the mtDNA clades c...
This directory contains a subdirectory for each UCE locus, and within each subdirectory is the bestT...
Single .tre file containing all 130 nuclear gene trees reduced to 8 major lineages. Inferred using R...
Supplemental data delineating the identifiers of each of the genes referenced in the phylogenetic tr...
The zip file contains all the bootstrap gene files. There are 199 files (one for each gene) with 50...
ML gene trees (inferred in RAxML) for each of the 277 enriched loci. The gene trees are unlabeled, b...
All 277 analyzed gene trees as inferred in RAxML. The loci are labeled and arranged by descending or...
Gene trees based on supercontigs (exons plus introns) alignments obtained via the RAxML with 200 bo...
Obtained using RAxML v8.2.1 under the model that minimizes the BIC for each loci. Individual gene se...
All gene trees generated and used. Includes raw unsmoothed gene trees, and those smoothed using bran...
Zip file containing individual gene trees estimated via RAxML for all genes used in this study
<p>Support values for ML, BI and MP are provided at the nodes. A branch with dotted end indicated a ...
Newick tree file containing gene trees estimated from individual loci with complete taxon occupancy....
Maximum likelihood (ML) trees for each sequence capture gene used for species tree analyses. ML anal...
Zip folder containing all 378 estimated gene trees using mrbayes. The gene trees were used for ASTRA...
<p>The trees are maximum-likelihood topologies with branches coloured to indicate the mtDNA clades c...
This directory contains a subdirectory for each UCE locus, and within each subdirectory is the bestT...
Single .tre file containing all 130 nuclear gene trees reduced to 8 major lineages. Inferred using R...
Supplemental data delineating the identifiers of each of the genes referenced in the phylogenetic tr...
The zip file contains all the bootstrap gene files. There are 199 files (one for each gene) with 50...
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