<p>Colors correspond to the level of plasticity, which is also given by the y-axis. X-axis is labeled according to terminal node order for the representative 16S rRNA gene from each genome on a phylogenetic tree rooted at the node ancestral to the Archaea and <i>Planctomyces</i> (<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0135868#pone.0135868.s004" target="_blank">S1 File</a>). Note that terminal node order on this rooted tree does not correspond to edge numbers on the unrooted tree used for phylogenetic placement (<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0135868#pone.0135868.s005" target="_blank">S2 File</a>). Arrows indicate strains or clades with exceptional plasticity, the majority...
<p>Branch lengths are proportional to the total number of SNPs, which are indicated above or below t...
The relative proportions of R7 core genes (open boxes) and strain-variable open reading frames (ORFs...
<p><b>Copyright information:</b></p><p>Taken from "Genetic diversity of the obligate intracellular b...
Species that contain pseudo and functional integrons are colored both purple and green. 16S rRNA gen...
<p>Filled triangles indicate strains possessing the <i>cag</i> PAI, open circles indicate strains la...
<p>Dark purple dots indicate clades in which the complete gene complement for direct reductive synth...
a<p>genes are ranked by the total number of congruent branches in the combined topologies.</p>b<p>th...
<p>Phylogenetic tree was inferred from global alignment of complete and partial genome nucleotide se...
<p><b>A</b> shows a phylogenetic tree of BchF overlaid over a phylogenomic tree of prokaryotes. B an...
<p>The organismal phylogeny is inferred from the concatenated protein alignment of 105 single-copy g...
<p>Comparative organization of genetic determinants for xenobiotic peripheral pathways in <i>R</i>. ...
<p>The eukaryotic PP2C set consists of the combined sequences (excluding PP2C7s) from Arabidopsis an...
<p>272 prokaryotic species are shown, whose full genome sequence is available, and which represent t...
Prokaryotic genomes are often considered to be mosaics of genes that do not necessarily share the sa...
<p>The phylogenetic tree was built from 1803 full-length 16S rRNA sequences of <i>Pseudomonas</i> av...
<p>Branch lengths are proportional to the total number of SNPs, which are indicated above or below t...
The relative proportions of R7 core genes (open boxes) and strain-variable open reading frames (ORFs...
<p><b>Copyright information:</b></p><p>Taken from "Genetic diversity of the obligate intracellular b...
Species that contain pseudo and functional integrons are colored both purple and green. 16S rRNA gen...
<p>Filled triangles indicate strains possessing the <i>cag</i> PAI, open circles indicate strains la...
<p>Dark purple dots indicate clades in which the complete gene complement for direct reductive synth...
a<p>genes are ranked by the total number of congruent branches in the combined topologies.</p>b<p>th...
<p>Phylogenetic tree was inferred from global alignment of complete and partial genome nucleotide se...
<p><b>A</b> shows a phylogenetic tree of BchF overlaid over a phylogenomic tree of prokaryotes. B an...
<p>The organismal phylogeny is inferred from the concatenated protein alignment of 105 single-copy g...
<p>Comparative organization of genetic determinants for xenobiotic peripheral pathways in <i>R</i>. ...
<p>The eukaryotic PP2C set consists of the combined sequences (excluding PP2C7s) from Arabidopsis an...
<p>272 prokaryotic species are shown, whose full genome sequence is available, and which represent t...
Prokaryotic genomes are often considered to be mosaics of genes that do not necessarily share the sa...
<p>The phylogenetic tree was built from 1803 full-length 16S rRNA sequences of <i>Pseudomonas</i> av...
<p>Branch lengths are proportional to the total number of SNPs, which are indicated above or below t...
The relative proportions of R7 core genes (open boxes) and strain-variable open reading frames (ORFs...
<p><b>Copyright information:</b></p><p>Taken from "Genetic diversity of the obligate intracellular b...