<p><sup>a</sup> For details of the <i>BRAF</i> copy number calculation, see <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0136720#sec005" target="_blank">Materials and Methods</a>. Thus, 50 fM ss DNA corresponds to 3x10<sup>6</sup> molecules per 100 μL, or 1x10<sup>6</sup> molecules of genomic DNA in 100 μL of the sample corresponds to the concentration 16.6 fM. Abundance value is determined using ratio of EvaGreen fluorescence obtained for individual analysis on wild-type and mutant specific capture probes as follows: I(<b>CP2m</b>)/(I(<b>CP2m</b>)+I(<b>CP2w</b>)).</p><p>* I (excitation/emission wavelength, nm); background signal is determined by fluorescence measurement of free single-stranded genomic DNA at the sa...
<p>Detection limit of the G13D mutation (A) and of the V600E BRAF mutation (B). wt: wild-type contro...
<p>(A) Complex of DNA with <b>CP2m</b>, signal-enhancing probe <b>P1</b> and EvaGreen dye, bright do...
The spotting schema of the barcode sequences is the same of Fig 2A. (A) Cy3 fluorescence image and t...
<p>(A) Visualization of <i>BRAF</i> V600E mutation on solid-support containing capture probe <b>CP2m...
<p>At very low copy numbers, the number of target genes per reaction fluctuates significantly, follo...
<p>The sensitivity of detection was analyzed with spike-in experiments. DNA from a melanoma cell lin...
<p>At very low copy numbers, only part of the reaction wells can contain the target gene due to Pois...
International audienceThe quantification of very low concentrations of circulating tumor DNA (ctDNA)...
<p>A and B. Assessment of 200-bp (A) and 41-bp (B) amplifiable DNA in study samples. DNA samples iso...
<p>(A) Cy3 fluorescence signal corresponding to the wild-type allele. Spots in column 1,2,3,4 repres...
<div><p>The protein kinase BRAF is one of the key players in regulating cellular responses to extrac...
<p>A and B. Detection of BRAF V600E1 mutation (A) and V600K mutation (B) in 45-, 35-, or 25-base syn...
The protein kinase BRAF is one of the key players in regulating cellular responses to extracellular ...
<p>(A) PCR results indicating the presence or absence of the BRAF<sup>V600E</sup> mutation. Cells ex...
<p>A. Schematic diagrams of primer design. Forward primers were chosen to specifically amplify BRAF ...
<p>Detection limit of the G13D mutation (A) and of the V600E BRAF mutation (B). wt: wild-type contro...
<p>(A) Complex of DNA with <b>CP2m</b>, signal-enhancing probe <b>P1</b> and EvaGreen dye, bright do...
The spotting schema of the barcode sequences is the same of Fig 2A. (A) Cy3 fluorescence image and t...
<p>(A) Visualization of <i>BRAF</i> V600E mutation on solid-support containing capture probe <b>CP2m...
<p>At very low copy numbers, the number of target genes per reaction fluctuates significantly, follo...
<p>The sensitivity of detection was analyzed with spike-in experiments. DNA from a melanoma cell lin...
<p>At very low copy numbers, only part of the reaction wells can contain the target gene due to Pois...
International audienceThe quantification of very low concentrations of circulating tumor DNA (ctDNA)...
<p>A and B. Assessment of 200-bp (A) and 41-bp (B) amplifiable DNA in study samples. DNA samples iso...
<p>(A) Cy3 fluorescence signal corresponding to the wild-type allele. Spots in column 1,2,3,4 repres...
<div><p>The protein kinase BRAF is one of the key players in regulating cellular responses to extrac...
<p>A and B. Detection of BRAF V600E1 mutation (A) and V600K mutation (B) in 45-, 35-, or 25-base syn...
The protein kinase BRAF is one of the key players in regulating cellular responses to extracellular ...
<p>(A) PCR results indicating the presence or absence of the BRAF<sup>V600E</sup> mutation. Cells ex...
<p>A. Schematic diagrams of primer design. Forward primers were chosen to specifically amplify BRAF ...
<p>Detection limit of the G13D mutation (A) and of the V600E BRAF mutation (B). wt: wild-type contro...
<p>(A) Complex of DNA with <b>CP2m</b>, signal-enhancing probe <b>P1</b> and EvaGreen dye, bright do...
The spotting schema of the barcode sequences is the same of Fig 2A. (A) Cy3 fluorescence image and t...