Additional file 3: Table S3. of Host genetic diversity influences the severity of Pseudomonas aeruginosa pneumonia in the Collaborative Cross mice

Host genetic background influences the response to the opportunistic Pseudomonas aeruginosa infection altering cell-mediated immunity and bacterial replication

De Simone, Maura
Spagnuolo, Lorenza
Lorè, Nicola Ivan
Rossi, Giacomo
Cigana, Cristina
De Fino, Ida
Iraqi, Fuad A
Bragonzi, Alessandra

January 2014

Pseudomonas aeruginosa is a common cause of healthcare-associated infections including pneumonia, bl...

Host genetic background influences the response to the opportunistic Pseudomonas aeruginosa infection altering cell-mediated immunity and bacterial replication.

Maura De Simone
Lorenza Spagnuolo
Nicola Ivan Lorè
Giacomo Rossi
Cristina Cigana
Ida De Fino
Fuad A Iraqi
Alessandra Bragonzi

Pseudomonas aeruginosa is a common cause of healthcare-associated infections including pneumonia, bl...

Additional file 2: of Diversity of virulence level phenotype of hypervirulent Klebsiella pneumoniae from different sequence type lineage

Qiucheng Shi (3233457)
Peng Lan (5699819)
Danyan Huang (5148011)
Xiaoting Hua (435699)
Yan Jiang (12139)
Jiancang Zhou (3233460)
Yunsong Yu (496103)

August 2018

Table S1. PCR primers used for studying Serotype and Virulence-Associated Genes of Klebsiella pneumo...

Additional file 1: Table S1. of Host genetic diversity influences the severity of Pseudomonas aeruginosa pneumonia in the Collaborative Cross mice

Nicola LorĂ¨ (3405530)
Fuad Iraqi (237899)
Alessandra Bragonzi (108447)

August 2015

Survival Time of each CC lines after P. aeruginosa airway infection. (DOCX 51 kb

Additional file 2: of Mapping genetic determinants of host susceptibility to Pseudomonas aeruginosa lung infection in mice

Maura De Simone (531456)
Lorenza Spagnuolo (527371)
Nicola LorĂ¨ (3405530)
Cristina Cigana (168420)
Ida De Fino (168422)
Karl Broman (259469)
Fuad Iraqi (237899)
Alessandra Bragonzi (108447)

May 2016

Recombination map position of 38 SNPs markers in the locus of interest of F2 Chromosome 6. (DOCX 16Â...

Additional file 3: of Comparative genomics and biological characterization of sequential Pseudomonas aeruginosa isolates from persistent airways infection

Irene Bianconi (108469)
Julie Jeukens (520628)
Luca Freschi (513340)
Beatriz AlcalĂĄ-Franco (3544031)
Marcella Facchini (2461264)
Brian Boyle (276326)
Antonio Molinaro (255584)
Irena Kukavica-Ibrulj (300135)
Burkhard TĂźmmler (3544028)
Roger Levesque (3487352)
Alessandra Bragonzi (108447)

December 2015

Genomic features of RP strains compared to others complete P. aeruginosa genomes [ 4 , 12 , 19 , 23 ...

Additional file 6: Table S6. of Influenza H3N2 infection of the collaborative cross founder strains reveals highly divergent host responses and identifies a unique phenotype in CAST/EiJ mice

Sarah Leist (3486557)
Carolin Pilzner (3486551)
Judith van den Brand (3486554)
Leonie Dengler (603949)
Robert Geffers (23730)
Thijs Kuiken (138959)
Rudi Balling (47350)
Heike Kollmus (3486548)
Klaus Schughart (150782)

February 2016

Average scoring of numbers of granulocytes and alveolar macrophages in C57BL/6Â J, 129S1/SvImJ and C...

Additional file 3: of Comparative analysis of humoral immune responses and pathologies of BALB/c and C57BL/6 wildtype mice experimentally infected with a highly virulent Rodentibacter pneumotropicus (Pasteurella pneumotropica) strain

Juliane Fornefett (5319992)
Jaqueline Krause (5319998)
Kristin Klose (797454)
Felix Fingas (5320004)
Rayk Hassert (2033527)
Laurentiu Benga (802818)
Thomas Grunwald (9810)
Uwe MĂźller (5320001)
Wieland SchrĂśdl (5320007)
Christoph Baums (5319995)

May 2018

Table S3. Scoring of clinical signs in mice infected with R. pneumotropicus. (PDF 10 kb

Additional file 5: of Comparative genomics and biological characterization of sequential Pseudomonas aeruginosa isolates from persistent airways infection

Irene Bianconi (108469)
Julie Jeukens (520628)
Luca Freschi (513340)
Beatriz AlcalĂĄ-Franco (3544031)
Marcella Facchini (2461264)
Brian Boyle (276326)
Antonio Molinaro (255584)
Irena Kukavica-Ibrulj (300135)
Burkhard TĂźmmler (3544028)
Roger Levesque (3487352)
Alessandra Bragonzi (108447)

December 2015

Non-synonymous SNPs between prototype strain PA14 and strains RP73, RP45 and RP1. (XLS 2195Â kb

Additional file 7: of Neutrophil elastase cleaves epithelial cadherin in acutely injured lung epithelium

Rachel Boxio (59724)
Julien Wartelle (3450767)
Béatrice Nawrocki-Raby (58024)
Brice Lagrange (3450755)
Laurette Malleret (3450758)
Timothee Hirche (3450770)
Clifford Taggart (3450764)
Yves Pacheco (3450761)
Gilles Devouassoux (441316)
Abderrazzaq Bentaher (3450752)

October 2016

Cell influx, albumin levels, and LDH release in BAL fluids of NE−/− and WT mice in response to P. ae...

Additional file 1: of Comparative analysis of humoral immune responses and pathologies of BALB/c and C57BL/6 wildtype mice experimentally infected with a highly virulent Rodentibacter pneumotropicus (Pasteurella pneumotropica) strain

Juliane Fornefett (5319992)
Jaqueline Krause (5319998)
Kristin Klose (797454)
Felix Fingas (5320004)
Rayk Hassert (2033527)
Laurentiu Benga (802818)
Thomas Grunwald (9810)
Uwe MĂźller (5320001)
Wieland SchrĂśdl (5320007)
Christoph Baums (5319995)

May 2018

Table S1. Scoring of semiquantitive bacteriological findings in R. pneumotropicus infected mice of t...

Additional file 3: of The overlapping continuum of host range among strains in the Pseudomonas syringae complex

Cindy Morris (449679)
Jay Lamichhane (6210977)
Ivan NikoliÄ (6210980)
SlaviĹĄa StankoviÄ (6210983)
Benoit Moury (3294669)

January 2019

Table S2. Conditions of tests reported in the literature to determine pathogenicity of strains of Ps...

Host genetic background influences the response to the opportunistic Pseudomonas aeruginosa infection altering cell-mediated immunity and bacterial replication

Maura De Simone, #1
Lorenza Spagnuolo, ¶
Nicola Ivan Lorè, ¶
Giacomo Rossi, 1
Cristina Cigana, 2
Ida De Fino, 1
Fuad A Iraqi, 1 Fuad A. Iraqi
and Alessandra Bragonzi, 3

January 2014

Pseudomonas aeruginosa is a common cause of healthcare-associated infections including pneumonia, bl...

Additional file 2: of Comparative analysis of humoral immune responses and pathologies of BALB/c and C57BL/6 wildtype mice experimentally infected with a highly virulent Rodentibacter pneumotropicus (Pasteurella pneumotropica) strain

Juliane Fornefett (5319992)
Jaqueline Krause (5319998)
Kristin Klose (797454)
Felix Fingas (5320004)
Rayk Hassert (2033527)
Laurentiu Benga (802818)
Thomas Grunwald (9810)
Uwe MĂźller (5320001)
Wieland SchrĂśdl (5320007)
Christoph Baums (5319995)

May 2018

Table S2. Scoring of semiquantitive bacteriological findings in R. pneumotropicus infected mice of t...

Additional file 5: of Whole genome sequencing reveals the emergence of a Pseudomonas aeruginosa shared strain sub-lineage among patients treated within a single cystic fibrosis centre

Bryan Wee (3473117)
Anna Tai (4569634)
Laura Sherrard (4569637)
Nouri Ben Zakour (5704643)
Kirt Hanks (5704646)
Timothy Kidd (4569640)
Kay Ramsay (4569643)
Iain Lamont (5704649)
David Whiley (171092)
Scott Bell (3475514)
Scott Beatson (5704652)

September 2018

Table S3. Details of co-pathogens in people with M3L7/M3L1 infection at time of isolation and in the...

Host genetic background influences the response to the opportunistic Pseudomonas aeruginosa infection altering cell-mediated immunity and bacterial replication

De Simone, Maura
Spagnuolo, Lorenza
Lorè, Nicola Ivan
Rossi, Giacomo
Cigana, Cristina
De Fino, Ida
Iraqi, Fuad A
Bragonzi, Alessandra

January 2014

Pseudomonas aeruginosa is a common cause of healthcare-associated infections including pneumonia, bl...

Host genetic background influences the response to the opportunistic Pseudomonas aeruginosa infection altering cell-mediated immunity and bacterial replication.

Maura De Simone
Lorenza Spagnuolo
Nicola Ivan Lorè
Giacomo Rossi
Cristina Cigana
Ida De Fino
Fuad A Iraqi
Alessandra Bragonzi

Pseudomonas aeruginosa is a common cause of healthcare-associated infections including pneumonia, bl...

Additional file 2: of Diversity of virulence level phenotype of hypervirulent Klebsiella pneumoniae from different sequence type lineage

Qiucheng Shi (3233457)
Peng Lan (5699819)
Danyan Huang (5148011)
Xiaoting Hua (435699)
Yan Jiang (12139)
Jiancang Zhou (3233460)
Yunsong Yu (496103)

August 2018

Table S1. PCR primers used for studying Serotype and Virulence-Associated Genes of Klebsiella pneumo...

Additional file 1: Table S1. of Host genetic diversity influences the severity of Pseudomonas aeruginosa pneumonia in the Collaborative Cross mice

Nicola LorĂ¨ (3405530)
Fuad Iraqi (237899)
Alessandra Bragonzi (108447)

August 2015

Survival Time of each CC lines after P. aeruginosa airway infection. (DOCX 51 kb

Additional file 2: of Mapping genetic determinants of host susceptibility to Pseudomonas aeruginosa lung infection in mice

Maura De Simone (531456)
Lorenza Spagnuolo (527371)
Nicola LorĂ¨ (3405530)
Cristina Cigana (168420)
Ida De Fino (168422)
Karl Broman (259469)
Fuad Iraqi (237899)
Alessandra Bragonzi (108447)

May 2016

Recombination map position of 38 SNPs markers in the locus of interest of F2 Chromosome 6. (DOCX 16Â...

Additional file 3: of Comparative genomics and biological characterization of sequential Pseudomonas aeruginosa isolates from persistent airways infection

Irene Bianconi (108469)
Julie Jeukens (520628)
Luca Freschi (513340)
Beatriz AlcalĂĄ-Franco (3544031)
Marcella Facchini (2461264)
Brian Boyle (276326)
Antonio Molinaro (255584)
Irena Kukavica-Ibrulj (300135)
Burkhard TĂźmmler (3544028)
Roger Levesque (3487352)
Alessandra Bragonzi (108447)

December 2015

Genomic features of RP strains compared to others complete P. aeruginosa genomes [ 4 , 12 , 19 , 23 ...

Additional file 6: Table S6. of Influenza H3N2 infection of the collaborative cross founder strains reveals highly divergent host responses and identifies a unique phenotype in CAST/EiJ mice

Sarah Leist (3486557)
Carolin Pilzner (3486551)
Judith van den Brand (3486554)
Leonie Dengler (603949)
Robert Geffers (23730)
Thijs Kuiken (138959)
Rudi Balling (47350)
Heike Kollmus (3486548)
Klaus Schughart (150782)

February 2016

Average scoring of numbers of granulocytes and alveolar macrophages in C57BL/6Â J, 129S1/SvImJ and C...

Additional file 3: of Comparative analysis of humoral immune responses and pathologies of BALB/c and C57BL/6 wildtype mice experimentally infected with a highly virulent Rodentibacter pneumotropicus (Pasteurella pneumotropica) strain

Juliane Fornefett (5319992)
Jaqueline Krause (5319998)
Kristin Klose (797454)
Felix Fingas (5320004)
Rayk Hassert (2033527)
Laurentiu Benga (802818)
Thomas Grunwald (9810)
Uwe MĂźller (5320001)
Wieland SchrĂśdl (5320007)
Christoph Baums (5319995)

May 2018

Table S3. Scoring of clinical signs in mice infected with R. pneumotropicus. (PDF 10 kb

Additional file 5: of Comparative genomics and biological characterization of sequential Pseudomonas aeruginosa isolates from persistent airways infection

Irene Bianconi (108469)
Julie Jeukens (520628)
Luca Freschi (513340)
Beatriz AlcalĂĄ-Franco (3544031)
Marcella Facchini (2461264)
Brian Boyle (276326)
Antonio Molinaro (255584)
Irena Kukavica-Ibrulj (300135)
Burkhard TĂźmmler (3544028)
Roger Levesque (3487352)
Alessandra Bragonzi (108447)

December 2015

Non-synonymous SNPs between prototype strain PA14 and strains RP73, RP45 and RP1. (XLS 2195Â kb

Additional file 7: of Neutrophil elastase cleaves epithelial cadherin in acutely injured lung epithelium

Rachel Boxio (59724)
Julien Wartelle (3450767)
Béatrice Nawrocki-Raby (58024)
Brice Lagrange (3450755)
Laurette Malleret (3450758)
Timothee Hirche (3450770)
Clifford Taggart (3450764)
Yves Pacheco (3450761)
Gilles Devouassoux (441316)
Abderrazzaq Bentaher (3450752)

October 2016

Cell influx, albumin levels, and LDH release in BAL fluids of NE−/− and WT mice in response to P. ae...

Additional file 1: of Comparative analysis of humoral immune responses and pathologies of BALB/c and C57BL/6 wildtype mice experimentally infected with a highly virulent Rodentibacter pneumotropicus (Pasteurella pneumotropica) strain

Juliane Fornefett (5319992)
Jaqueline Krause (5319998)
Kristin Klose (797454)
Felix Fingas (5320004)
Rayk Hassert (2033527)
Laurentiu Benga (802818)
Thomas Grunwald (9810)
Uwe MĂźller (5320001)
Wieland SchrĂśdl (5320007)
Christoph Baums (5319995)

May 2018

Table S1. Scoring of semiquantitive bacteriological findings in R. pneumotropicus infected mice of t...

Additional file 3: of The overlapping continuum of host range among strains in the Pseudomonas syringae complex

Cindy Morris (449679)
Jay Lamichhane (6210977)
Ivan NikoliÄ (6210980)
SlaviĹĄa StankoviÄ (6210983)
Benoit Moury (3294669)

January 2019

Table S2. Conditions of tests reported in the literature to determine pathogenicity of strains of Ps...

Host genetic background influences the response to the opportunistic Pseudomonas aeruginosa infection altering cell-mediated immunity and bacterial replication

Maura De Simone, #1
Lorenza Spagnuolo, ¶
Nicola Ivan Lorè, ¶
Giacomo Rossi, 1
Cristina Cigana, 2
Ida De Fino, 1
Fuad A Iraqi, 1 Fuad A. Iraqi
and Alessandra Bragonzi, 3

January 2014

Pseudomonas aeruginosa is a common cause of healthcare-associated infections including pneumonia, bl...

Additional file 2: of Comparative analysis of humoral immune responses and pathologies of BALB/c and C57BL/6 wildtype mice experimentally infected with a highly virulent Rodentibacter pneumotropicus (Pasteurella pneumotropica) strain

Juliane Fornefett (5319992)
Jaqueline Krause (5319998)
Kristin Klose (797454)
Felix Fingas (5320004)
Rayk Hassert (2033527)
Laurentiu Benga (802818)
Thomas Grunwald (9810)
Uwe MĂźller (5320001)
Wieland SchrĂśdl (5320007)
Christoph Baums (5319995)

May 2018

Table S2. Scoring of semiquantitive bacteriological findings in R. pneumotropicus infected mice of t...

Additional file 5: of Whole genome sequencing reveals the emergence of a Pseudomonas aeruginosa shared strain sub-lineage among patients treated within a single cystic fibrosis centre

Bryan Wee (3473117)
Anna Tai (4569634)
Laura Sherrard (4569637)
Nouri Ben Zakour (5704643)
Kirt Hanks (5704646)
Timothy Kidd (4569640)
Kay Ramsay (4569643)
Iain Lamont (5704649)
David Whiley (171092)
Scott Bell (3475514)
Scott Beatson (5704652)

September 2018

Table S3. Details of co-pathogens in people with M3L7/M3L1 infection at time of isolation and in the...

Host genetic background influences the response to the opportunistic Pseudomonas aeruginosa infection altering cell-mediated immunity and bacterial replication

De Simone, Maura
Spagnuolo, Lorenza
Lorè, Nicola Ivan
Rossi, Giacomo
Cigana, Cristina
De Fino, Ida
Iraqi, Fuad A
Bragonzi, Alessandra

January 2014

Pseudomonas aeruginosa is a common cause of healthcare-associated infections including pneumonia, bl...

Host genetic background influences the response to the opportunistic Pseudomonas aeruginosa infection altering cell-mediated immunity and bacterial replication.

Maura De Simone
Lorenza Spagnuolo
Nicola Ivan Lorè
Giacomo Rossi
Cristina Cigana
Ida De Fino
Fuad A Iraqi
Alessandra Bragonzi

Pseudomonas aeruginosa is a common cause of healthcare-associated infections including pneumonia, bl...

Additional file 2: of Diversity of virulence level phenotype of hypervirulent Klebsiella pneumoniae from different sequence type lineage

Qiucheng Shi (3233457)
Peng Lan (5699819)
Danyan Huang (5148011)
Xiaoting Hua (435699)
Yan Jiang (12139)
Jiancang Zhou (3233460)
Yunsong Yu (496103)

August 2018

Table S1. PCR primers used for studying Serotype and Virulence-Associated Genes of Klebsiella pneumo...

Additional file 3: Table S3. of Host genetic diversity influences the severity of Pseudomonas aeruginosa pneumonia in the Collaborative Cross mice

Abstract

Extracted data

Additional file 3: Table S3. of Host genetic diversity influences the severity of Pseudomonas aeruginosa pneumonia in the Collaborative Cross mice

Abstract

Extracted data

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