<p>Obtained Rosetta and AMBER energy landscapes are shown for WT, G12V, and Q61L H-Ras. The location of the inactive and active structural states of H-Ras are indicated by the respective <i>On</i> and <i>Off</i> annotations. Other structural states corresponding to novel, observed basins in the landscapes are annotated by <i>Conf1</i> and <i>Conf2</i>.</p
<p><b>A</b>: Free energy. <b>B</b>: Energy contribution . <b>C</b>: Entropy contribution . Two dimen...
Recent advances in the potential energy landscapes approach are highlighted, including both theoreti...
<p>Displacements of CAs along each of the three top PCs are visualized on the right by plotting the ...
<p>The energy landscape associated with functional conformations generated by SIfTER for WT H-Ras is...
Comparison of ensemble of low-cost off âon paths across H-Ras WT and variants. Column 1 lists the ...
Visualization in 2D of map and paths computed for H-Ras R164AQ165V. The computed map for the H-Ras R...
Visualization in 2D of map and paths computed for H-Ras G12V. The computed map for the H-Ras G12V va...
<p>Top panel: A representative conformation is drawn from each of the four basins obtained for the W...
<p>Upper subfigures are the free energy profiles of K6, K27, K29 and K33 linked diUbs plotted as a f...
<p>Projections on the top two PCs are shown for all 86 collected structures of H-Ras. The 46 structu...
<p>The quantities of topography of energy landscapes are shown in (A) energy gap , (B) energy roughn...
Energy landscapes provide a valuable means for studying the fold-ing dynamics of short RNA molecules...
The computational analysis of high dimensional surfaces is a fundamental problem across a wide rang...
<div><p>An important goal in molecular biology is to understand functional changes upon single-point...
Using a non-thermal local search, called Extremal Optimization (EO), in conjunction with a recently ...
<p><b>A</b>: Free energy. <b>B</b>: Energy contribution . <b>C</b>: Entropy contribution . Two dimen...
Recent advances in the potential energy landscapes approach are highlighted, including both theoreti...
<p>Displacements of CAs along each of the three top PCs are visualized on the right by plotting the ...
<p>The energy landscape associated with functional conformations generated by SIfTER for WT H-Ras is...
Comparison of ensemble of low-cost off âon paths across H-Ras WT and variants. Column 1 lists the ...
Visualization in 2D of map and paths computed for H-Ras R164AQ165V. The computed map for the H-Ras R...
Visualization in 2D of map and paths computed for H-Ras G12V. The computed map for the H-Ras G12V va...
<p>Top panel: A representative conformation is drawn from each of the four basins obtained for the W...
<p>Upper subfigures are the free energy profiles of K6, K27, K29 and K33 linked diUbs plotted as a f...
<p>Projections on the top two PCs are shown for all 86 collected structures of H-Ras. The 46 structu...
<p>The quantities of topography of energy landscapes are shown in (A) energy gap , (B) energy roughn...
Energy landscapes provide a valuable means for studying the fold-ing dynamics of short RNA molecules...
The computational analysis of high dimensional surfaces is a fundamental problem across a wide rang...
<div><p>An important goal in molecular biology is to understand functional changes upon single-point...
Using a non-thermal local search, called Extremal Optimization (EO), in conjunction with a recently ...
<p><b>A</b>: Free energy. <b>B</b>: Energy contribution . <b>C</b>: Entropy contribution . Two dimen...
Recent advances in the potential energy landscapes approach are highlighted, including both theoreti...
<p>Displacements of CAs along each of the three top PCs are visualized on the right by plotting the ...