Additional file 2: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Additional file 5: of Gene expression profiling of trout regenerating muscle reveals common transcriptional signatures with hyperplastic growth zones of the post-embryonic myotome

JerĂ´me Montfort (3497717)
Aurelie Le Cam (3497714)
Jean-Charles Gabillard (3489062)
Pierre-Yves Rescan (86526)

October 2016

Major functional categories of cluster IV and lists of genes that formed them. (XLSX 25 kb

Additional file 1: of Evolution in chronic cold: varied loss of cellular response to heat in Antarctic notothenioid fish

Kevin Bilyk (5772059)
Luis Vargas-Chacoff (768456)
C.-H.Christina Cheng (5772062)

September 2018

Table S1. Overview of the tissues used in each species’ reference transcriptome and their respective...

Additional file 1: of De novo transcriptome assembly and positive selection analysis of an individual deep-sea fish

Yi Lan (3356099)
Jin Sun (117866)
Ting Xu (215531)
Chong Chen (360710)
Renmao Tian (3244935)
Jian-Wen Qiu (416567)
Pei-Yuan Qian (124761)

May 2018

Table S1. Codon usage among Aldrovandia affinis, Astyanax mexicanus, Gadus morhua and Xiphophorus ma...

Additional file 3: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Francesco Lamanna (820731)
Frank Kirschbaum (3294675)
Isabelle Waurick (3300642)
Christoph Dieterich (41457)
Ralph Tiedemann (187244)

September 2015

Blast results of C. tshokwe transcriptome assembly. Tabular blast report showing the results of the ...

Additional file 6: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Francesco Lamanna (820731)
Frank Kirschbaum (3294675)
Isabelle Waurick (3300642)
Christoph Dieterich (41457)
Ralph Tiedemann (187244)

September 2015

Transcriptsâ length distribution of the C. compressirostris Trinity assembly. (PDF 24Â kb

Additional file 9: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Francesco Lamanna (820731)
Frank Kirschbaum (3294675)
Isabelle Waurick (3300642)
Christoph Dieterich (41457)
Ralph Tiedemann (187244)

September 2015

List of differentially expressed genes belonging to the class âsignal transductionâ, obtained fr...

Additional file 7: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Francesco Lamanna (820731)
Frank Kirschbaum (3294675)
Isabelle Waurick (3300642)
Christoph Dieterich (41457)
Ralph Tiedemann (187244)

September 2015

Transcriptsâ length distribution of the C. tshokwe Trinity assembly. (PDF 5Â kb

Additional file 5: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Francesco Lamanna (820731)
Frank Kirschbaum (3294675)
Isabelle Waurick (3300642)
Christoph Dieterich (41457)
Ralph Tiedemann (187244)

September 2015

Changes in gene expression between EO and SM for C. tshokwe transcriptome. Results of the edgeR DE-a...

Additional file 8: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Francesco Lamanna (820731)
Frank Kirschbaum (3294675)
Isabelle Waurick (3300642)
Christoph Dieterich (41457)
Ralph Tiedemann (187244)

September 2015

Distribution of length coverage between retrieved ORFs and reference database (SwissProt). (PDF 44Â ...

Additional file 1: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Francesco Lamanna (820731)
Frank Kirschbaum (3294675)
Isabelle Waurick (3300642)
Christoph Dieterich (41457)
Ralph Tiedemann (187244)

September 2015

Sequencing statistics. For each of the eight produced libraries we report: the number of pooled indi...

Data from: De novo assembly and characterization of the skeletal muscle and electric organ transcriptomes of the African weakly-electric fish Campylomormyrus compressirostris (Mormyridae, Teleostei)

Lamanna, Francesco
Kirschbaum, Frank
Tiedemann, Ralph

April 2014

African weakly electric-fishes (Mormyridae) underwent an outstanding adaptive radiation (about 200 s...

Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Lamanna, F.
Kirschbaum, F.
Waurick, I.
Dieterich, C.
Tiedemann, R.

January 2015

BACKGROUND: African weakly-electric fishes of the family Mormyridae are able to produce and perceive...

Additional file 2: of Time matters! Developmental shift in gene expression between the head and the trunk region of the cichlid fish Astatotilapia burtoni

Athimed El Taher (3331803)
Nicolás Lichilín (6206306)
Walter Salzburger (15544)
Astrid Böhne (3408194)

January 2019

Table S1. Sequencing data and processing. Table S2. Statistics for the improved genome annotation. T...

Additional file 1: Table S1. of Molecular evolution of globin genes in Gymnotiform electric fishes: relation to hypoxia tolerance

Ran Tian (2449612)
Mauricio Losilla (3745013)
Ying Lu (66401)
Guang Yang (154978)
Harold Zakon (3745011)

February 2017

List of Species Used in this Study. Table S2. Statistics for amplified genes for each species. Table...

Additional file 1: of Determination of dosage compensation and comparison of gene expression in a triploid hybrid fish

Li Ren (417022)
Chenchen Tang (3620012)
Wuhui Li (3483701)
Jialin Cui (3620009)
Xingjun Tan (3620006)
Yafeng Xiong (3620003)
Jie Chen (5892)
Jun Wang (5906)
Jun Xiao (179459)
Yi Zhou (2723)
Jing Wang (1228470)
Min Tao (143985)
Chun Zhang (29010)
Shaojun Liu (282495)

January 2017

Summary information of assembled sequences blasted against the five databases. (A). Contig distribut...

Additional file 5: of Gene expression profiling of trout regenerating muscle reveals common transcriptional signatures with hyperplastic growth zones of the post-embryonic myotome

JerĂ´me Montfort (3497717)
Aurelie Le Cam (3497714)
Jean-Charles Gabillard (3489062)
Pierre-Yves Rescan (86526)

October 2016

Major functional categories of cluster IV and lists of genes that formed them. (XLSX 25 kb

Additional file 1: of Evolution in chronic cold: varied loss of cellular response to heat in Antarctic notothenioid fish

Kevin Bilyk (5772059)
Luis Vargas-Chacoff (768456)
C.-H.Christina Cheng (5772062)

September 2018

Table S1. Overview of the tissues used in each species’ reference transcriptome and their respective...

Additional file 1: of De novo transcriptome assembly and positive selection analysis of an individual deep-sea fish

Yi Lan (3356099)
Jin Sun (117866)
Ting Xu (215531)
Chong Chen (360710)
Renmao Tian (3244935)
Jian-Wen Qiu (416567)
Pei-Yuan Qian (124761)

May 2018

Table S1. Codon usage among Aldrovandia affinis, Astyanax mexicanus, Gadus morhua and Xiphophorus ma...

Additional file 3: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Francesco Lamanna (820731)
Frank Kirschbaum (3294675)
Isabelle Waurick (3300642)
Christoph Dieterich (41457)
Ralph Tiedemann (187244)

September 2015

Blast results of C. tshokwe transcriptome assembly. Tabular blast report showing the results of the ...

Additional file 6: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Francesco Lamanna (820731)
Frank Kirschbaum (3294675)
Isabelle Waurick (3300642)
Christoph Dieterich (41457)
Ralph Tiedemann (187244)

September 2015

Transcriptsâ length distribution of the C. compressirostris Trinity assembly. (PDF 24Â kb

Additional file 9: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Francesco Lamanna (820731)
Frank Kirschbaum (3294675)
Isabelle Waurick (3300642)
Christoph Dieterich (41457)
Ralph Tiedemann (187244)

September 2015

List of differentially expressed genes belonging to the class âsignal transductionâ, obtained fr...

Additional file 7: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Francesco Lamanna (820731)
Frank Kirschbaum (3294675)
Isabelle Waurick (3300642)
Christoph Dieterich (41457)
Ralph Tiedemann (187244)

September 2015

Transcriptsâ length distribution of the C. tshokwe Trinity assembly. (PDF 5Â kb

Additional file 5: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Francesco Lamanna (820731)
Frank Kirschbaum (3294675)
Isabelle Waurick (3300642)
Christoph Dieterich (41457)
Ralph Tiedemann (187244)

September 2015

Changes in gene expression between EO and SM for C. tshokwe transcriptome. Results of the edgeR DE-a...

Additional file 8: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Francesco Lamanna (820731)
Frank Kirschbaum (3294675)
Isabelle Waurick (3300642)
Christoph Dieterich (41457)
Ralph Tiedemann (187244)

September 2015

Distribution of length coverage between retrieved ORFs and reference database (SwissProt). (PDF 44Â ...

Additional file 1: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Francesco Lamanna (820731)
Frank Kirschbaum (3294675)
Isabelle Waurick (3300642)
Christoph Dieterich (41457)
Ralph Tiedemann (187244)

September 2015

Sequencing statistics. For each of the eight produced libraries we report: the number of pooled indi...

Data from: De novo assembly and characterization of the skeletal muscle and electric organ transcriptomes of the African weakly-electric fish Campylomormyrus compressirostris (Mormyridae, Teleostei)

Lamanna, Francesco
Kirschbaum, Frank
Tiedemann, Ralph

April 2014

African weakly electric-fishes (Mormyridae) underwent an outstanding adaptive radiation (about 200 s...

Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Lamanna, F.
Kirschbaum, F.
Waurick, I.
Dieterich, C.
Tiedemann, R.

January 2015

BACKGROUND: African weakly-electric fishes of the family Mormyridae are able to produce and perceive...

Additional file 2: of Time matters! Developmental shift in gene expression between the head and the trunk region of the cichlid fish Astatotilapia burtoni

Athimed El Taher (3331803)
Nicolás Lichilín (6206306)
Walter Salzburger (15544)
Astrid Böhne (3408194)

January 2019

Table S1. Sequencing data and processing. Table S2. Statistics for the improved genome annotation. T...

Additional file 1: Table S1. of Molecular evolution of globin genes in Gymnotiform electric fishes: relation to hypoxia tolerance

Ran Tian (2449612)
Mauricio Losilla (3745013)
Ying Lu (66401)
Guang Yang (154978)
Harold Zakon (3745011)

February 2017

List of Species Used in this Study. Table S2. Statistics for amplified genes for each species. Table...

Additional file 1: of Determination of dosage compensation and comparison of gene expression in a triploid hybrid fish

Li Ren (417022)
Chenchen Tang (3620012)
Wuhui Li (3483701)
Jialin Cui (3620009)
Xingjun Tan (3620006)
Yafeng Xiong (3620003)
Jie Chen (5892)
Jun Wang (5906)
Jun Xiao (179459)
Yi Zhou (2723)
Jing Wang (1228470)
Min Tao (143985)
Chun Zhang (29010)
Shaojun Liu (282495)

January 2017

Summary information of assembled sequences blasted against the five databases. (A). Contig distribut...

Additional file 5: of Gene expression profiling of trout regenerating muscle reveals common transcriptional signatures with hyperplastic growth zones of the post-embryonic myotome

JerĂ´me Montfort (3497717)
Aurelie Le Cam (3497714)
Jean-Charles Gabillard (3489062)
Pierre-Yves Rescan (86526)

October 2016

Major functional categories of cluster IV and lists of genes that formed them. (XLSX 25 kb

Additional file 1: of Evolution in chronic cold: varied loss of cellular response to heat in Antarctic notothenioid fish

Kevin Bilyk (5772059)
Luis Vargas-Chacoff (768456)
C.-H.Christina Cheng (5772062)

September 2018

Table S1. Overview of the tissues used in each species’ reference transcriptome and their respective...

Additional file 1: of De novo transcriptome assembly and positive selection analysis of an individual deep-sea fish

Yi Lan (3356099)
Jin Sun (117866)
Ting Xu (215531)
Chong Chen (360710)
Renmao Tian (3244935)
Jian-Wen Qiu (416567)
Pei-Yuan Qian (124761)

May 2018

Table S1. Codon usage among Aldrovandia affinis, Astyanax mexicanus, Gadus morhua and Xiphophorus ma...

Additional file 2: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Abstract

Extracted data

Additional file 2: of Cross-tissue and cross-species analysis of gene expression in skeletal muscle and electric organ of African weakly-electric fish (Teleostei; Mormyridae)

Abstract

Extracted data

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