<p><sup>a</sup> Primers were designed to generate conserved amplicons within the non-collagenous region of each <i>bucl</i> gene. Primers for <i>bucl6</i> and <i>bucl15</i> were designed flanking the collagenous region, which varies in size among strains (<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0137578#pone.0137578.s006" target="_blank">S4B Fig</a>). Primers Bucl8_3F/3R were used to generate amplicon from Bp K96243 reference strain, whereas primers Bucl8_2F/2R selectively amplify products from Bp and Bm gDNA and were used in large-scale PCR screening (<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0137578#pone.0137578.s006" target="_blank">S4B Fig</a>).</p><p><sup>b</sup> Amplicon sizes e...
Amplicon sequences generated (and their corresponding length) by each of the primer pairs used in th...
<p>(A) (<i>Lane 1</i>) 50 bp DNA ladder (Fermentas, USA) for size determinations; (<i>Lane 2</i>) Sb...
<p><b>A.</b> Schematic representation of the strategy of primer extension used for detecting pause s...
<p>(A) Schematic representation of <i>bucl</i> distribution. Relative position and orientation of ea...
Primers, amplicon size (base pairs [bp]), annealing temperatures (° C), and references for amplified...
<p>Panel A shows the primer design for amplifying the V6–V9 16S rRNA gene region analyzed by cloning...
a<p>Primers designed based on each <i>pmp</i> sequence of reference strains E/Bour and L<sub>2</sub>...
<p>R = A+G; Y = C+T; W = A+T; M = A+C; K = G+T; D = A+T+G; H = A+C+T; N = A+G+C+T.</p><p>Each long N...
new nucleic acid amplification method that uses multi-ple cycles of primer extension reactions. The ...
a<p>amplicon size: 7.5 kb.</p>b<p>expected amplicon size: 1.8 kb; non-homologously recombined DNA is...
1<p>Amplification was performed in a GeneAmp 9700 PCR System (Applied Biosystems) by a 10 min incuba...
<p>Three replicates of the PCR amplicons with each primer set were loaded; M indicates a100 bp DNA s...
<p>Note that forward and reverse primers are linked to primer A and B (454 Life Sciences; Roche) res...
<p>bp, base pairs; GAPDH, glyceraldehyde 3-phosphate dehydrogenase; ICAM-1, intercellular adhesion m...
Padlock probes are useful in a variety of genetic applications, some of which require that the probe...
Amplicon sequences generated (and their corresponding length) by each of the primer pairs used in th...
<p>(A) (<i>Lane 1</i>) 50 bp DNA ladder (Fermentas, USA) for size determinations; (<i>Lane 2</i>) Sb...
<p><b>A.</b> Schematic representation of the strategy of primer extension used for detecting pause s...
<p>(A) Schematic representation of <i>bucl</i> distribution. Relative position and orientation of ea...
Primers, amplicon size (base pairs [bp]), annealing temperatures (° C), and references for amplified...
<p>Panel A shows the primer design for amplifying the V6–V9 16S rRNA gene region analyzed by cloning...
a<p>Primers designed based on each <i>pmp</i> sequence of reference strains E/Bour and L<sub>2</sub>...
<p>R = A+G; Y = C+T; W = A+T; M = A+C; K = G+T; D = A+T+G; H = A+C+T; N = A+G+C+T.</p><p>Each long N...
new nucleic acid amplification method that uses multi-ple cycles of primer extension reactions. The ...
a<p>amplicon size: 7.5 kb.</p>b<p>expected amplicon size: 1.8 kb; non-homologously recombined DNA is...
1<p>Amplification was performed in a GeneAmp 9700 PCR System (Applied Biosystems) by a 10 min incuba...
<p>Three replicates of the PCR amplicons with each primer set were loaded; M indicates a100 bp DNA s...
<p>Note that forward and reverse primers are linked to primer A and B (454 Life Sciences; Roche) res...
<p>bp, base pairs; GAPDH, glyceraldehyde 3-phosphate dehydrogenase; ICAM-1, intercellular adhesion m...
Padlock probes are useful in a variety of genetic applications, some of which require that the probe...
Amplicon sequences generated (and their corresponding length) by each of the primer pairs used in th...
<p>(A) (<i>Lane 1</i>) 50 bp DNA ladder (Fermentas, USA) for size determinations; (<i>Lane 2</i>) Sb...
<p><b>A.</b> Schematic representation of the strategy of primer extension used for detecting pause s...