<p>The neighbor-joining method was used to construct the phylogenetic tree. Numbers at each node indicate the bootstrap support (1,000 replicates). Those written in red letters are 14 clostridial species having a significant difference in relative abundance between HC40 and MS20 samples. Treg-inducing strains are indicated by “St” and are written in blue letters [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0137429#pone.0137429.ref013" target="_blank">13</a>].</p
<p>The phylogenetic tree was constructed by Clustal W analysis based on the concatenated nucleotide ...
<p>Bootstrap values (expressed as percentages of 1,000 replications) of > 70% are shown at branch po...
<p>The Neighbor-joining phylogenetic tree was constructed based on the HCV Core gene from 53 cases i...
<p>The phylogenetic tree was obtained using neighbor-joining <a href="http://www.plosone.org/article...
<p>Taxa with sequenced genomes are marked with an asterisk. Cluster numbers correspond to the cluste...
<p>The phylogenetic tree was inferred using the neighbor-joining method with MEGA6.0 and the bootstr...
<p>The neighbor-joining tree was calculated from 1,056 concatenated and multiple aligned core genome...
<p>(A) The neighbor-joining tree of T6SSs using ClpV orthologs from 348 T6SS clusters in 231 species...
<p>The phylogenetic tree based on (A) concatenated 7 MLST gene sequences, (B) concatenated 7 MLST ge...
<p>The phylogenetic relationships of <i>C. amylolentus</i> to the pathogenic <i>Cryptococcus</i> spe...
<p>Scale bar represents 0.1 substitutions per nucleotide position. The <i>Escherichia coli</i> seque...
<p>A, Neighbor-joining phylogenetic tree for 120 <i>gag</i> sequences and relative reference sequenc...
Supplementary Figure (S1): Bayesian 50% majority rule phylogram of 16S ribosomal RNA region showing ...
<p>Phylogenetic tree based on the analysis of 16S rDNA gene sequences of 925 nucleotides. Node robus...
<p>(A) Maximum Likelihood tree with bootstrap support for 39 modern strains and the three ancient st...
<p>The phylogenetic tree was constructed by Clustal W analysis based on the concatenated nucleotide ...
<p>Bootstrap values (expressed as percentages of 1,000 replications) of > 70% are shown at branch po...
<p>The Neighbor-joining phylogenetic tree was constructed based on the HCV Core gene from 53 cases i...
<p>The phylogenetic tree was obtained using neighbor-joining <a href="http://www.plosone.org/article...
<p>Taxa with sequenced genomes are marked with an asterisk. Cluster numbers correspond to the cluste...
<p>The phylogenetic tree was inferred using the neighbor-joining method with MEGA6.0 and the bootstr...
<p>The neighbor-joining tree was calculated from 1,056 concatenated and multiple aligned core genome...
<p>(A) The neighbor-joining tree of T6SSs using ClpV orthologs from 348 T6SS clusters in 231 species...
<p>The phylogenetic tree based on (A) concatenated 7 MLST gene sequences, (B) concatenated 7 MLST ge...
<p>The phylogenetic relationships of <i>C. amylolentus</i> to the pathogenic <i>Cryptococcus</i> spe...
<p>Scale bar represents 0.1 substitutions per nucleotide position. The <i>Escherichia coli</i> seque...
<p>A, Neighbor-joining phylogenetic tree for 120 <i>gag</i> sequences and relative reference sequenc...
Supplementary Figure (S1): Bayesian 50% majority rule phylogram of 16S ribosomal RNA region showing ...
<p>Phylogenetic tree based on the analysis of 16S rDNA gene sequences of 925 nucleotides. Node robus...
<p>(A) Maximum Likelihood tree with bootstrap support for 39 modern strains and the three ancient st...
<p>The phylogenetic tree was constructed by Clustal W analysis based on the concatenated nucleotide ...
<p>Bootstrap values (expressed as percentages of 1,000 replications) of > 70% are shown at branch po...
<p>The Neighbor-joining phylogenetic tree was constructed based on the HCV Core gene from 53 cases i...