<p>Fold change in gene expression of enteroids stimulated with Poly I:C and colonoids stimulated with Poly I:C were compared for differences in either magnitude of response or changes in the direction of response. <b>A)</b> Genes with altered direction or magnitude of response are graphed. <b>B)</b> Gene expression in unstimulated enteroids and colonoids was compared using enteroid expression as baseline. Samples and genes were clustered by Pearson correlation.</p
<p>A: Differentially expressed genes at FDR 0.05 (highlighted in red) between non-involuted and invo...
(A) Venn diagram of colonic DEGs among four groups of Water+PBS, DSS+PBS, DSS+rCsCP and DSS+CsCA. (B...
<p>A) Relative Gene expression difference between IBD and IBS for significantly differentially expre...
<p>Enteroids were grown and stimulated as in <a href="http://www.plosone.org/article/info:doi/10.137...
<p>Colonoids were grown and stimulated as in <a href="http://www.plosone.org/article/info:doi/10.137...
<p>Crypts from the entire colon were plated in Matrigel for two days. Pam3CSK4 (400ng/mL), Poly I:C ...
<p>Crypts from the jejunum were plated in Matrigel for two days. Pam3CSK4 (400ng/mL), Poly I:C (40μg...
<p>DSS-induced colitic and non-inflamed control colon groups are defined in the Materials and Method...
<p>Four independent studies were analyzed for the expression of indicated genes and their clinical s...
<p>(A) Venn diagram of the differentially expressed probe sets of the top 50 most upregulated genes ...
<p>(<b>A</b>) Expression levels of genes in pre-treatment (Pre-Tt) colitis subjects are shown relati...
<p>The NCI-H292 cell line was stimulated with poly(I:C) in a time course over 24 hours and expressio...
<p>Real-time PCR analysis of (<b>A&C</b>) SI and (<b>B&D</b>) LI organoids derived from expanded cel...
<p>(A) Venn diagram of the differentially expressed probe sets of the top 50 significantly upregulat...
<p>Enteroids and colonoids were grown from Ticam1<sup>Lps2</sup> jejunum and colon. <b>A)</b> Entero...
<p>A: Differentially expressed genes at FDR 0.05 (highlighted in red) between non-involuted and invo...
(A) Venn diagram of colonic DEGs among four groups of Water+PBS, DSS+PBS, DSS+rCsCP and DSS+CsCA. (B...
<p>A) Relative Gene expression difference between IBD and IBS for significantly differentially expre...
<p>Enteroids were grown and stimulated as in <a href="http://www.plosone.org/article/info:doi/10.137...
<p>Colonoids were grown and stimulated as in <a href="http://www.plosone.org/article/info:doi/10.137...
<p>Crypts from the entire colon were plated in Matrigel for two days. Pam3CSK4 (400ng/mL), Poly I:C ...
<p>Crypts from the jejunum were plated in Matrigel for two days. Pam3CSK4 (400ng/mL), Poly I:C (40μg...
<p>DSS-induced colitic and non-inflamed control colon groups are defined in the Materials and Method...
<p>Four independent studies were analyzed for the expression of indicated genes and their clinical s...
<p>(A) Venn diagram of the differentially expressed probe sets of the top 50 most upregulated genes ...
<p>(<b>A</b>) Expression levels of genes in pre-treatment (Pre-Tt) colitis subjects are shown relati...
<p>The NCI-H292 cell line was stimulated with poly(I:C) in a time course over 24 hours and expressio...
<p>Real-time PCR analysis of (<b>A&C</b>) SI and (<b>B&D</b>) LI organoids derived from expanded cel...
<p>(A) Venn diagram of the differentially expressed probe sets of the top 50 significantly upregulat...
<p>Enteroids and colonoids were grown from Ticam1<sup>Lps2</sup> jejunum and colon. <b>A)</b> Entero...
<p>A: Differentially expressed genes at FDR 0.05 (highlighted in red) between non-involuted and invo...
(A) Venn diagram of colonic DEGs among four groups of Water+PBS, DSS+PBS, DSS+rCsCP and DSS+CsCA. (B...
<p>A) Relative Gene expression difference between IBD and IBS for significantly differentially expre...