Additional file 1: of Association between in vivo bone formation and ex vivo migratory capacity of human bone marrow stromal cells

Rikke Andersen (528309)
Walid Zaher (3486578)
Kenneth Larsen (3581786)
Nicholas Ditzel (127179)
Katharina Drews (701182)
Wasco Wruck (559739)
James Adjaye (108608)
Basem Abdallah (3581783)
Moustapha Kassem (101848)

Publication date

October 2015

DOI

10.6084/m9.figshare.c.3644648_d1.v1

Abstract

Figure S1. Showing generation and differentiation of hBMSC-TERT-Luc cell lines, Table S1 presenting a list of primers used for RT-PCR, and Table S2 presenting genes upregulated by group 1 (hMSC-TERT+Bone and three HBF clones) over group 2 (hMSC-TERTâBone and three LBF clones).(PDF 317 kb

Extracted data

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Additional file 1: of Association between in vivo bone formation and ex vivo migratory capacity of human bone marrow stromal cells

Rikke Andersen (528309)
Walid Zaher (3486578)
Kenneth Larsen (3581786)
Nicholas Ditzel (127179)
Katharina Drews (701182)
Wasco Wruck (559739)
James Adjaye (108608)
Basem Abdallah (3581783)
Moustapha Kassem (101848)

Open link

Publication date

October 2015

DOI

10.6084/m9.figshare.c.3644648_d1.v1

Abstract

Extracted data

Nihal AlMuraikhi (6002234)
Dalia Ali (6002237)
Aliah Alshanwani (6002240)
Radhakrishnan Vishnubalaji (3563306)
Muthurangan Manikandan (6002243)
Muhammad Atteya (6002246)
Abdulaziz Siyal (6002249)
Musaad Alfayez (3571736)
Abdullah Aldahmash (3563300)
Moustapha Kassem (101848)
Nehad Alajez (3563309)

November 2018

List of differentially expressed genes (2.0 FC, p corr <â0.05) in human bone marrow mesenchymal st...

Additional file 3: of In vitro expansion affects the response of human bone marrow stromal cells to irradiation

Yang Xiang (35912)
Chun Wu (237024)
Jiang Wu (174815)
Weili Quan (6440876)
Chao Cheng (11274)
Jian Zhou (28020)
Li Chen (5749)
Lixin Xiang (409601)
Fengjie Li (543286)
Kebin Zhang (773363)
Qian Ran (322351)
Yi Zhang (9093)
Zhongjun Li (322364)

March 2019

Figure S2. Identification of BMSCs. a Typical surface marker for the P6 and P10 BMSCs was detected u...

Additional file 1: of A simple and reliable protocol for long-term culture of murine bone marrow stromal (mesenchymal) stem cells that retained their in vitro and in vivo stemness in long-term culture

Basem Abdallah (3581783)
Abdullah Alzahrani (3372671)
Ashraf Abdel-Moneim (6286544)
Nicholas Ditzel (127179)
Moustapha Kassem (101848)

February 2019

Table S1. List of primers used for qRT-PCR. Table S2. Full osteogenic gene expression list (total 84...

Additional file 10: of Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability?

Alison Merryweather-Clarke (3577583)
David Cook (361680)
Barbara Lara (4621561)
Peng Hua (6104888)
Emmanouela Repapi (220397)
Neil Ashley (81454)
Shiang Lim (3583736)
Suzanne Watt (6104891)

December 2018

Table S3. Genes differentially Expressed between clones with high osteogenic potential (HOP) and tho...

Additional file 8: of Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability?

Alison Merryweather-Clarke (3577583)
David Cook (361680)
Barbara Lara (4621561)
Peng Hua (6104888)
Emmanouela Repapi (220397)
Neil Ashley (81454)
Shiang Lim (3583736)
Suzanne Watt (6104891)

December 2018

Table S2. Reads Per Kilobase of transcript per Million mapped reads (RPKM) for the sixteen sequenced...

Additional file 12: of Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability?

Alison Merryweather-Clarke (3577583)
David Cook (361680)
Barbara Lara (4621561)
Peng Hua (6104888)
Emmanouela Repapi (220397)
Neil Ashley (81454)
Shiang Lim (3583736)
Suzanne Watt (6104891)

December 2018

Table S4. Genes differentially expressed between good and poor vascular supportive CFU-F clones. (DO...

Additional file 3: of Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability?

Alison Merryweather-Clarke (3577583)
David Cook (361680)
Barbara Lara (4621561)
Peng Hua (6104888)
Emmanouela Repapi (220397)
Neil Ashley (81454)
Shiang Lim (3583736)
Suzanne Watt (6104891)

December 2018

Figure S2.âCFU-F clonal assay. a and b) show typical morphology of CFU-F clones in culture at P1. ...

Additional file 2: Table S1. of Regionally-derived cell populations and skeletal stem cells from human foetal femora exhibit specific osteochondral and multi-lineage differentiation capacity in vitro and ex vivo

David Gothard (838141)
Kelvin Cheung (3517304)
Janos Kanczler (3461840)
David Wilson (57684)
Richard Oreffo (3461846)

December 2015

Forward and reverse primer sequences used for quantitative RT-PCR analysis. (JPEG 1068 kb

Additional file 1: of Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability?

Alison Merryweather-Clarke (3577583)
David Cook (361680)
Barbara Lara (4621561)
Peng Hua (6104888)
Emmanouela Repapi (220397)
Neil Ashley (81454)
Shiang Lim (3583736)
Suzanne Watt (6104891)

December 2018

Figure S1. Examples of assays used to assess potency of CFU-F clonal cultures at P1. Left panel: Exa...

Additional file 3: Figure S2. of An engineered multicomponent bone marrow niche for the recapitulation of hematopoiesis at ectopic transplantation sites

Mónica Ventura Ferreira (3580451)
Christian Bergmann (3580439)
Isabelle Bodensiek (3580466)
Kristina Peukert (3580460)
Jessica Abert (3580457)
Rafael Kramann (542579)
Paul Kachel (3580445)
Björn Rath (473484)
Stephan Rütten (3580454)
Ruth Knuchel (3580448)
Benjamin Ebert (3580463)
Horst Fischer (1401331)
Tim Brümmendorf (3446933)
Rebekka Schneider (3580442)

January 2016

(A) Monitorization of the CD34+CD38− primitive phenotype in human-derived CD34+ progenitors co-cultu...

Additional file 6: of Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability?

Alison Merryweather-Clarke (3577583)
David Cook (361680)
Barbara Lara (4621561)
Peng Hua (6104888)
Emmanouela Repapi (220397)
Neil Ashley (81454)
Shiang Lim (3583736)
Suzanne Watt (6104891)

December 2018

Figure S5. Correlations between osteogenic lineage differentiation potential and vascular tubule sup...

Additional file 1: Table S1. of Ex vivo identification and characterization of a population of CD13high CD105+ CD45− mesenchymal stem cells in human bone marrow

Carmen Muñiz (3575660)
Cristina Teodosio (143750)
Andrea Mayado (3575645)
Ana Amaral (3318111)
Sergio Matarraz (309205)
Paloma Bárcena (214347)
Maria Sanchez (3575654)
Iván Alvarez-Twose (3575648)
María Diez-Campelo (2141482)
Andrés García-Montero (470590)
Juan Blanco (3497807)
Maria Del Cañizo (3575651)
Javier del Pino Montes (3575657)
Alberto Orfao (108164)

September 2015

List of antibodies used for the identification, characterization and isolation of bone marrow mesenc...

Additional file 11: of Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability?

Alison Merryweather-Clarke (3577583)
David Cook (361680)
Barbara Lara (4621561)
Peng Hua (6104888)
Emmanouela Repapi (220397)
Neil Ashley (81454)
Shiang Lim (3583736)
Suzanne Watt (6104891)

December 2018

Figure S8.âCFU-F clones with AOC tri-lineage differentiation potential and differing vascular tubu...

Additional file 8: of In vitro expansion affects the response of human bone marrow stromal cells to irradiation

Yang Xiang (35912)
Chun Wu (237024)
Jiang Wu (174815)
Weili Quan (6440876)
Chao Cheng (11274)
Jian Zhou (28020)
Li Chen (5749)
Lixin Xiang (409601)
Fengjie Li (543286)
Kebin Zhang (773363)
Qian Ran (322351)
Yi Zhang (9093)
Zhongjun Li (322364)

March 2019

Figure S4. Gene expression profiles of BMSCs before and after irradiation. a Unsupervised analysis o...

Additional file 1: of Stem cell library screen identified ruxolitinib as regulator of osteoblastic differentiation of human skeletal stem cells

Nihal AlMuraikhi (6002234)
Dalia Ali (6002237)
Aliah Alshanwani (6002240)
Radhakrishnan Vishnubalaji (3563306)
Muthurangan Manikandan (6002243)
Muhammad Atteya (6002246)
Abdulaziz Siyal (6002249)
Musaad Alfayez (3571736)
Abdullah Aldahmash (3563300)
Moustapha Kassem (101848)
Nehad Alajez (3563309)

November 2018

List of differentially expressed genes (2.0 FC, p corr <â0.05) in human bone marrow mesenchymal st...

Additional file 3: of In vitro expansion affects the response of human bone marrow stromal cells to irradiation

Yang Xiang (35912)
Chun Wu (237024)
Jiang Wu (174815)
Weili Quan (6440876)
Chao Cheng (11274)
Jian Zhou (28020)
Li Chen (5749)
Lixin Xiang (409601)
Fengjie Li (543286)
Kebin Zhang (773363)
Qian Ran (322351)
Yi Zhang (9093)
Zhongjun Li (322364)

March 2019

Figure S2. Identification of BMSCs. a Typical surface marker for the P6 and P10 BMSCs was detected u...

Basem Abdallah (3581783)
Abdullah Alzahrani (3372671)
Ashraf Abdel-Moneim (6286544)
Nicholas Ditzel (127179)
Moustapha Kassem (101848)

February 2019

Table S1. List of primers used for qRT-PCR. Table S2. Full osteogenic gene expression list (total 84...

Additional file 10: of Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability?

Alison Merryweather-Clarke (3577583)
David Cook (361680)
Barbara Lara (4621561)
Peng Hua (6104888)
Emmanouela Repapi (220397)
Neil Ashley (81454)
Shiang Lim (3583736)
Suzanne Watt (6104891)

December 2018

Table S3. Genes differentially Expressed between clones with high osteogenic potential (HOP) and tho...

Additional file 8: of Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability?

Alison Merryweather-Clarke (3577583)
David Cook (361680)
Barbara Lara (4621561)
Peng Hua (6104888)
Emmanouela Repapi (220397)
Neil Ashley (81454)
Shiang Lim (3583736)
Suzanne Watt (6104891)

December 2018

Table S2. Reads Per Kilobase of transcript per Million mapped reads (RPKM) for the sixteen sequenced...

Additional file 12: of Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability?

Alison Merryweather-Clarke (3577583)
David Cook (361680)
Barbara Lara (4621561)
Peng Hua (6104888)
Emmanouela Repapi (220397)
Neil Ashley (81454)
Shiang Lim (3583736)
Suzanne Watt (6104891)

December 2018

Table S4. Genes differentially expressed between good and poor vascular supportive CFU-F clones. (DO...

Additional file 3: of Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability?

Alison Merryweather-Clarke (3577583)
David Cook (361680)
Barbara Lara (4621561)
Peng Hua (6104888)
Emmanouela Repapi (220397)
Neil Ashley (81454)
Shiang Lim (3583736)
Suzanne Watt (6104891)

December 2018

Figure S2.âCFU-F clonal assay. a and b) show typical morphology of CFU-F clones in culture at P1. ...

David Gothard (838141)
Kelvin Cheung (3517304)
Janos Kanczler (3461840)
David Wilson (57684)
Richard Oreffo (3461846)

December 2015

Forward and reverse primer sequences used for quantitative RT-PCR analysis. (JPEG 1068 kb

Additional file 1: of Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability?

Alison Merryweather-Clarke (3577583)
David Cook (361680)
Barbara Lara (4621561)
Peng Hua (6104888)
Emmanouela Repapi (220397)
Neil Ashley (81454)
Shiang Lim (3583736)
Suzanne Watt (6104891)

December 2018

Figure S1. Examples of assays used to assess potency of CFU-F clonal cultures at P1. Left panel: Exa...

Additional file 3: Figure S2. of An engineered multicomponent bone marrow niche for the recapitulation of hematopoiesis at ectopic transplantation sites

Mónica Ventura Ferreira (3580451)
Christian Bergmann (3580439)
Isabelle Bodensiek (3580466)
Kristina Peukert (3580460)
Jessica Abert (3580457)
Rafael Kramann (542579)
Paul Kachel (3580445)
Björn Rath (473484)
Stephan Rütten (3580454)
Ruth Knuchel (3580448)
Benjamin Ebert (3580463)
Horst Fischer (1401331)
Tim Brümmendorf (3446933)
Rebekka Schneider (3580442)

January 2016

(A) Monitorization of the CD34+CD38− primitive phenotype in human-derived CD34+ progenitors co-cultu...

Additional file 6: of Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability?

Alison Merryweather-Clarke (3577583)
David Cook (361680)
Barbara Lara (4621561)
Peng Hua (6104888)
Emmanouela Repapi (220397)
Neil Ashley (81454)
Shiang Lim (3583736)
Suzanne Watt (6104891)

December 2018

Figure S5. Correlations between osteogenic lineage differentiation potential and vascular tubule sup...

Additional file 1: Table S1. of Ex vivo identification and characterization of a population of CD13high CD105+ CD45− mesenchymal stem cells in human bone marrow

Carmen Muñiz (3575660)
Cristina Teodosio (143750)
Andrea Mayado (3575645)
Ana Amaral (3318111)
Sergio Matarraz (309205)
Paloma Bárcena (214347)
Maria Sanchez (3575654)
Iván Alvarez-Twose (3575648)
María Diez-Campelo (2141482)
Andrés García-Montero (470590)
Juan Blanco (3497807)
Maria Del Cañizo (3575651)
Javier del Pino Montes (3575657)
Alberto Orfao (108164)

September 2015

List of antibodies used for the identification, characterization and isolation of bone marrow mesenc...

Additional file 11: of Does osteogenic potential of clonal human bone marrow mesenchymal stem/stromal cells correlate with their vascular supportive ability?

Alison Merryweather-Clarke (3577583)
David Cook (361680)
Barbara Lara (4621561)
Peng Hua (6104888)
Emmanouela Repapi (220397)
Neil Ashley (81454)
Shiang Lim (3583736)
Suzanne Watt (6104891)

December 2018

Figure S8.âCFU-F clones with AOC tri-lineage differentiation potential and differing vascular tubu...

Additional file 8: of In vitro expansion affects the response of human bone marrow stromal cells to irradiation

Yang Xiang (35912)
Chun Wu (237024)
Jiang Wu (174815)
Weili Quan (6440876)
Chao Cheng (11274)
Jian Zhou (28020)
Li Chen (5749)
Lixin Xiang (409601)
Fengjie Li (543286)
Kebin Zhang (773363)
Qian Ran (322351)
Yi Zhang (9093)
Zhongjun Li (322364)

March 2019

Figure S4. Gene expression profiles of BMSCs before and after irradiation. a Unsupervised analysis o...

Additional file 1: of Stem cell library screen identified ruxolitinib as regulator of osteoblastic differentiation of human skeletal stem cells

Nihal AlMuraikhi (6002234)
Dalia Ali (6002237)
Aliah Alshanwani (6002240)
Radhakrishnan Vishnubalaji (3563306)
Muthurangan Manikandan (6002243)
Muhammad Atteya (6002246)
Abdulaziz Siyal (6002249)
Musaad Alfayez (3571736)
Abdullah Aldahmash (3563300)
Moustapha Kassem (101848)
Nehad Alajez (3563309)

November 2018

List of differentially expressed genes (2.0 FC, p corr <â0.05) in human bone marrow mesenchymal st...

Additional file 3: of In vitro expansion affects the response of human bone marrow stromal cells to irradiation

Yang Xiang (35912)
Chun Wu (237024)
Jiang Wu (174815)
Weili Quan (6440876)
Chao Cheng (11274)
Jian Zhou (28020)
Li Chen (5749)
Lixin Xiang (409601)
Fengjie Li (543286)
Kebin Zhang (773363)
Qian Ran (322351)
Yi Zhang (9093)
Zhongjun Li (322364)

March 2019

Figure S2. Identification of BMSCs. a Typical surface marker for the P6 and P10 BMSCs was detected u...

Additional file 1: of Association between in vivo bone formation and ex vivo migratory capacity of human bone marrow stromal cells

Abstract

Extracted data

Additional file 1: of Association between in vivo bone formation and ex vivo migratory capacity of human bone marrow stromal cells

Abstract

Extracted data

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