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Microsatellite genotypes formatted for the program STRUCTURE

Danielle Stephens (400010)
Alan N. Wilton (3275382)
Peter J. S. Fleming (416582)
Oliver Berry (692372)

Publication date

October 2016

DOI

10.5061/dryad.2rd32/1

Abstract

Input file for STRUCTURE. One line format. Accompanying data for each individual listed in file Genotypes and Result

Extracted data

Related items

Structure input file

Serrano, Xaymara
Baums, Iliana B.
O'Reilly, Katherine
Smith, Tyler B.
Jones, Ross J.
Shearer, Tonya L.
Nunes, Flavia L. D.
Baker, Andrew C.

July 2014

This files contains all unique, M. cavernosa multi-locus genotypes as generated with 9 microsatellit...

Microsatellite genotype data

Rippe, John P.
Matz, Mikhail V.
Green, Elizabeth A.
Medina, Mónica
Khawaja, Nida Z.
Pongwarin, Thanapat
Pinzón C., Jorge H.
Castillo, Karl D.
Davies, Sarah W.

October 2017

Genotype information for each sample is displayed on a single line. Labels for diploid loci are orga...

microsat genotypes

Hopkins, Robin
Levin, Donald A.
Rausher, Mark D

August 2011

This file contains the microsatellite lengths for each individual at each of the 9 loci. Population...

STRUCTURE input: microsatellites

Haenel, Gregory

November 2016

STRUCTURE input file of microsatellite alleles.Seven Microsatellites are provided in columns. The fi...

Genotype Data_Structure format

Johansson, Mattias L.
Alberto, Filipe
Reed, Daniel C.
Raimondi, Peter T.
Coelho, Nelson C.
Young, Mary A.
Drake, Patrick T.
Edwards, Christopher A.
Cavanaugh, Kyle
Assis, Jorge
Ladah, Lydia B.
Bell, Tom W.
Coyer, James A.
Siegel, David A.
Serrão, Ester A.

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Complete genotype data in Structure program format. Row 1 lists the microsatellite markers. Microsat...

MHC and microsatellite genotypes

Jacek Radwan (460705)
Katarzyna Kuduk (668668)
Esther Levy (304711)
Natasha LeBas (3309711)
Wieslaw Babik (648236)

November 2016

MHC and microsatellite genotypes. MHC genotypes are in Structure-like dominant format (each allele t...

B. schlosseri microsatellite data

Anaïs Lacoursière-Roussel (3243858)
Christopher W. McKindsey (242796)
Dan G. Bock (3243855)
Melania E. Cristescu (111050)
Frédéric Guichard (177600)
Philippe Girard (235881)
Pierre Legendre (298160)

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Genepop-formatted file containing individual genotype data (10 microsatellite loci

STRUCTURE_Input_Files

McLean, Claire A.
Stuart-Fox, Devi
Moussalli, Adnan

July 2014

Input files for STRUCTURE analyses. The "Microsatellite" sheet corresponds to data used in Fig. 2H o...

Silene Microsatellite Data

Lesica, Peter
Adams, Brice
Smith, Christian T.

April 2016

This file contains genotype data for ten microsatellite loci in Silene spaldingii. Data are present...

Spinks, Phillip Q.
Thomson, Robert C.
Shaffer, H. Bradley

May 2019

This is the input file for the structure analyses that includes genotype data for 923 individuals, a...

structure_input

Simit Patel (3242289)
Tilman Schell (3290367)
Constanze Eifert (446786)
Barbara Feldmeyer (3242292)
Markus Pfenninger (76671)

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This is a tab-delimited text file containing the nuclear marker genotypes at 9 microsatellite marker...

Microsatellite Genotypes

Lompo, Djingdia
Vinceti, Barbara
Konrad, Heino
Gaisberger, Hannes
Geburek, Thomas

September 2018

Data file contains microsatellite genotypes for the 8 SSRs studied in 1610 individuals from 84 popul...

Microsatellite genotypes

Mobley, Kenyon B.
Granroth-Wilding, Hanna
Ellmen, Mikko
Vähä, Juha-Pekka
Aykanat, Tutku
Johnston, Susan E.
Orell, Panu
Erkinaro, Jaakko
Primmer, Craig R.

February 2019

This file contains all microsatellite genotype data for adults and offspring used in parentage assig...

Barley, Anthony J.
Monnahan, Patrick J.
Thomson, Robert C.
Grismer, L. Lee
Brown, Rafe M.

March 2015

This is a structure formatted file containing genotypic data for each individual used in the study

Microsatellite genotype data for all individuals

Steven J. Micheletti (3290157)

November 2016

This file contains microsatellite genotype data for the 1334 individuals used in the study. The colu...

Structure input file

Serrano, Xaymara
Baums, Iliana B.
O'Reilly, Katherine
Smith, Tyler B.
Jones, Ross J.
Shearer, Tonya L.
Nunes, Flavia L. D.
Baker, Andrew C.

July 2014

This files contains all unique, M. cavernosa multi-locus genotypes as generated with 9 microsatellit...

Microsatellite genotype data

Rippe, John P.
Matz, Mikhail V.
Green, Elizabeth A.
Medina, Mónica
Khawaja, Nida Z.
Pongwarin, Thanapat
Pinzón C., Jorge H.
Castillo, Karl D.
Davies, Sarah W.

October 2017

Genotype information for each sample is displayed on a single line. Labels for diploid loci are orga...

microsat genotypes

Hopkins, Robin
Levin, Donald A.
Rausher, Mark D

August 2011

This file contains the microsatellite lengths for each individual at each of the 9 loci. Population...

STRUCTURE input: microsatellites

Haenel, Gregory

November 2016

STRUCTURE input file of microsatellite alleles.Seven Microsatellites are provided in columns. The fi...

Genotype Data_Structure format

Johansson, Mattias L.
Alberto, Filipe
Reed, Daniel C.
Raimondi, Peter T.
Coelho, Nelson C.
Young, Mary A.
Drake, Patrick T.
Edwards, Christopher A.
Cavanaugh, Kyle
Assis, Jorge
Ladah, Lydia B.
Bell, Tom W.
Coyer, James A.
Siegel, David A.
Serrão, Ester A.

September 2015

Complete genotype data in Structure program format. Row 1 lists the microsatellite markers. Microsat...

MHC and microsatellite genotypes

Jacek Radwan (460705)
Katarzyna Kuduk (668668)
Esther Levy (304711)
Natasha LeBas (3309711)
Wieslaw Babik (648236)

November 2016

MHC and microsatellite genotypes. MHC genotypes are in Structure-like dominant format (each allele t...

B. schlosseri microsatellite data

Anaïs Lacoursière-Roussel (3243858)
Christopher W. McKindsey (242796)
Dan G. Bock (3243855)
Melania E. Cristescu (111050)
Frédéric Guichard (177600)
Philippe Girard (235881)
Pierre Legendre (298160)

October 2016

Genepop-formatted file containing individual genotype data (10 microsatellite loci

STRUCTURE_Input_Files

McLean, Claire A.
Stuart-Fox, Devi
Moussalli, Adnan

July 2014

Input files for STRUCTURE analyses. The "Microsatellite" sheet corresponds to data used in Fig. 2H o...

Silene Microsatellite Data

Lesica, Peter
Adams, Brice
Smith, Christian T.

April 2016

This file contains genotype data for ten microsatellite loci in Silene spaldingii. Data are present...

Spinks, Phillip Q.
Thomson, Robert C.
Shaffer, H. Bradley

May 2019

This is the input file for the structure analyses that includes genotype data for 923 individuals, a...

structure_input

Simit Patel (3242289)
Tilman Schell (3290367)
Constanze Eifert (446786)
Barbara Feldmeyer (3242292)
Markus Pfenninger (76671)

November 2016

This is a tab-delimited text file containing the nuclear marker genotypes at 9 microsatellite marker...

Microsatellite Genotypes

Lompo, Djingdia
Vinceti, Barbara
Konrad, Heino
Gaisberger, Hannes
Geburek, Thomas

September 2018

Data file contains microsatellite genotypes for the 8 SSRs studied in 1610 individuals from 84 popul...

Microsatellite genotypes

Mobley, Kenyon B.
Granroth-Wilding, Hanna
Ellmen, Mikko
Vähä, Juha-Pekka
Aykanat, Tutku
Johnston, Susan E.
Orell, Panu
Erkinaro, Jaakko
Primmer, Craig R.

February 2019

This file contains all microsatellite genotype data for adults and offspring used in parentage assig...

Barley, Anthony J.
Monnahan, Patrick J.
Thomson, Robert C.
Grismer, L. Lee
Brown, Rafe M.

March 2015

This is a structure formatted file containing genotypic data for each individual used in the study

Microsatellite genotype data for all individuals

Steven J. Micheletti (3290157)

November 2016

This file contains microsatellite genotype data for the 1334 individuals used in the study. The colu...

Structure input file

Serrano, Xaymara
Baums, Iliana B.
O'Reilly, Katherine
Smith, Tyler B.
Jones, Ross J.
Shearer, Tonya L.
Nunes, Flavia L. D.
Baker, Andrew C.

July 2014

This files contains all unique, M. cavernosa multi-locus genotypes as generated with 9 microsatellit...

Microsatellite genotype data

Rippe, John P.
Matz, Mikhail V.
Green, Elizabeth A.
Medina, Mónica
Khawaja, Nida Z.
Pongwarin, Thanapat
Pinzón C., Jorge H.
Castillo, Karl D.
Davies, Sarah W.

October 2017

Genotype information for each sample is displayed on a single line. Labels for diploid loci are orga...

microsat genotypes

Hopkins, Robin
Levin, Donald A.
Rausher, Mark D

August 2011

This file contains the microsatellite lengths for each individual at each of the 9 loci. Population...