Additional file 6: Table S4. of Large-scale identification of wheat genes resistant to cereal cyst nematode Heterodera avenae using comparative transcriptomic analysis

Additional file 6: of Transcriptomic analysis of genes in soybean in response to Peronospora manshurica infection

Hang Dong (4754823)
Shuangfeng Shi (5237513)
Chong Zhang (418677)
Sihui Zhu (5237516)
Mei Li (217363)
Jie Tan (339881)
Yue Yu (260119)
Liping Lin (213510)
Shirong Jia (131035)
Xujing Wang (21247)
Yuanhua Wu (5237519)
Yuhui Liu (669854)

May 2018

Table S6. Primers used for qRT-PCR amplification of seven DEGs. Note: F: forward primers; R: reverse...

Additional file 4: of Identification and mapping of expressed genes associated with the 2DL QTL for fusarium head blight resistance in the wheat line Wuhan 1

Xinkun Hu (6723512)
Hélène Rocheleau (786538)
Curt McCartney (3166362)
Chiara Biselli (114669)
Paolo Bagnaresi (84939)
Margaret Balcerzak (6723515)
George Fedak (348480)
Zehong Yan (208778)
Giampiero Valè (114698)
Shahrokh Khanizadeh (6723518)
Thérèse Ouellet (5699972)

May 2019

Expression profile patterns for genes differentially expressed between R and S NIL and located on th...

Additional file 6: Table S5. of Differential transcriptomic responses to Fusarium graminearum infection in two barley quantitative trait loci associated with Fusarium head blight resistance

Yadong Huang (108296)
Lin Li (28817)
Kevin Smith (792017)
Gary Muehlbauer (3467255)

May 2016

Primer sequences and results of qPCR validation of RNA-Seq experiments. (XLSX 12Â kb

Additional file 8: Table S6. of Large-scale identification of wheat genes resistant to cereal cyst nematode Heterodera avenae using comparative transcriptomic analysis

Ling-An Kong (185399)
Du-Qing Wu (3459554)
Wen-Kun Huang (3459545)
Huan Peng (438848)
Gao-Feng Wang (2079625)
Jiang-Kuan Cui (526863)
Shi-Ming Liu (3459551)
Zhi-Gang Li (2436430)
Jun Yang (2084)
De-Liang Peng (3459548)

October 2015

KEGG enrichment analysis of the rescued genes exhibiting uncoordinated expression profiles. (XLSX 16...

Additional file 2: Table S1. of Large-scale identification of wheat genes resistant to cereal cyst nematode Heterodera avenae using comparative transcriptomic analysis

Ling-An Kong (185399)
Du-Qing Wu (3459554)
Wen-Kun Huang (3459545)
Huan Peng (438848)
Gao-Feng Wang (2079625)
Jiang-Kuan Cui (526863)
Shi-Ming Liu (3459551)
Zhi-Gang Li (2436430)
Jun Yang (2084)
De-Liang Peng (3459548)

October 2015

Number and percentage of H. avenae juveniles in wheat roots of both compatible and incompatible whea...

Additional file 3: Figure S2. of Large-scale identification of wheat genes resistant to cereal cyst nematode Heterodera avenae using comparative transcriptomic analysis

Ling-An Kong (185399)
Du-Qing Wu (3459554)
Wen-Kun Huang (3459545)
Huan Peng (438848)
Gao-Feng Wang (2079625)
Jiang-Kuan Cui (526863)
Shi-Ming Liu (3459551)
Zhi-Gang Li (2436430)
Jun Yang (2084)
De-Liang Peng (3459548)

October 2015

Identification of dramatically upregulated genes within VP1620 at three time points. Venn diagram sh...

Additional file 4: Table S3. of Genetic architecture of cyst nematode resistance revealed by genome-wide association study in soybean

T. Vuong (75458)
H. Sonah (3439628)
C. Meinhardt (3439637)
R. Deshmukh (3439640)
S. Kadam (3439643)
R. Nelson (3439631)
J. Shannon (3439625)
H. Nguyen (3439634)

August 2015

Differential expression pattern of candidate genes evaluated in Heterodera glycines infected cells c...

Additional file 6: Table S4. of Genetic architecture of cyst nematode resistance revealed by genome-wide association study in soybean

T. Vuong (75458)
H. Sonah (3439628)
C. Meinhardt (3439637)
R. Deshmukh (3439640)
S. Kadam (3439643)
R. Nelson (3439631)
J. Shannon (3439625)
H. Nguyen (3439634)

August 2015

A comparison of genome-wide association study (GWAS) loci identified in the present study and quanti...

Additional file 1: Table S1. of Genetic architecture of cyst nematode resistance revealed by genome-wide association study in soybean

T. Vuong (75458)
H. Sonah (3439628)
C. Meinhardt (3439637)
R. Deshmukh (3439640)
S. Kadam (3439643)
R. Nelson (3439631)
J. Shannon (3439625)
H. Nguyen (3439634)

August 2015

Plant introductions were characterized as known and novel sources of resistance to soybean cyst nema...

Additional file 16: Table S6. of A comparative analysis of nonhost resistance across the two Triticeae crop species wheat and barley

Rhoda Delventhal (4641691)
Jeyaraman Rajaraman (4641697)
Francesca Stefanato (4641700)
Sajid Rehman (4641685)
Reza Aghnoum (4641673)
Graham McGrann (3421589)
Marie Bolger (4641688)
Björn Usadel (53140)
Pete Hedley (4641694)
Lesley Boyd (4641682)
Rients Niks (4641676)
Patrick Schweizer (95873)
Ulrich Schaffrath (3496208)

December 2017

Primer combinations used for validation of microarray gene expression profiles by qRT- PCR (Addition...

Additional file 7: Table S5. of Genetic architecture of cyst nematode resistance revealed by genome-wide association study in soybean

T. Vuong (75458)
H. Sonah (3439628)
C. Meinhardt (3439637)
R. Deshmukh (3439640)
S. Kadam (3439643)
R. Nelson (3439631)
J. Shannon (3439625)
H. Nguyen (3439634)

August 2015

Five hundred fifty three soybean germplasm accessions with morphological characteristics, agronomic ...

Additional file 4: of Comprehensive evaluation of resistance effects of pyramiding lines with different broad-spectrum resistance genes against Magnaporthe oryzae in rice (Oryza sativa L.)

Yunyu Wu (748120)
Ning Xiao (223232)
Yu Chen (29959)
Ling Yu (330944)
Cunhong Pan (748121)
Yuhong Li (448146)
Xiaoxiang Zhang (628483)
Niansheng Huang (6418001)
Hongjuan Ji (6418004)
Zhengyuan Dai (748122)
Xijun Chen (4859197)
Aihong Li (385857)

March 2019

Table S3. Detail information of molecular markers tightly linked to different resistant genes. (DOCX...

Additional file 3: of Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes

Youlian Pan (68548)
Ziying Liu (4814301)
Hélène Rocheleau (786538)
François Fauteux (5699969)
Yunli Wang (3091296)
Curt McCartney (3166362)
Thérèse Ouellet (5699972)

August 2018

FHB resistant genes across all three resistant genotypes (A), common between two genotypes (B), and ...

Additional file 3: Table S2. of Genetic architecture of cyst nematode resistance revealed by genome-wide association study in soybean

T. Vuong (75458)
H. Sonah (3439628)
C. Meinhardt (3439637)
R. Deshmukh (3439640)
S. Kadam (3439643)
R. Nelson (3439631)
J. Shannon (3439625)
H. Nguyen (3439634)

August 2015

Functional annotation of candidate genes located at significant GWAS loci for SCN resistance in soyb...

Genetic and biological analysis of root lesion nematode (Pratylenchus thornei) resistance loci in wheat

Rahman, Muhammad Shefatur

January 2019

[Embargoed] Includes Appendix 1 -- Appendix 2 -- Movie Clip 6.1The root lesion nematode Pratylenchus...

Additional file 6: of Transcriptomic analysis of genes in soybean in response to Peronospora manshurica infection

Hang Dong (4754823)
Shuangfeng Shi (5237513)
Chong Zhang (418677)
Sihui Zhu (5237516)
Mei Li (217363)
Jie Tan (339881)
Yue Yu (260119)
Liping Lin (213510)
Shirong Jia (131035)
Xujing Wang (21247)
Yuanhua Wu (5237519)
Yuhui Liu (669854)

May 2018

Table S6. Primers used for qRT-PCR amplification of seven DEGs. Note: F: forward primers; R: reverse...

Additional file 4: of Identification and mapping of expressed genes associated with the 2DL QTL for fusarium head blight resistance in the wheat line Wuhan 1

Xinkun Hu (6723512)
Hélène Rocheleau (786538)
Curt McCartney (3166362)
Chiara Biselli (114669)
Paolo Bagnaresi (84939)
Margaret Balcerzak (6723515)
George Fedak (348480)
Zehong Yan (208778)
Giampiero Valè (114698)
Shahrokh Khanizadeh (6723518)
Thérèse Ouellet (5699972)

May 2019

Expression profile patterns for genes differentially expressed between R and S NIL and located on th...

Additional file 6: Table S5. of Differential transcriptomic responses to Fusarium graminearum infection in two barley quantitative trait loci associated with Fusarium head blight resistance

Yadong Huang (108296)
Lin Li (28817)
Kevin Smith (792017)
Gary Muehlbauer (3467255)

May 2016

Primer sequences and results of qPCR validation of RNA-Seq experiments. (XLSX 12Â kb

Additional file 8: Table S6. of Large-scale identification of wheat genes resistant to cereal cyst nematode Heterodera avenae using comparative transcriptomic analysis

Ling-An Kong (185399)
Du-Qing Wu (3459554)
Wen-Kun Huang (3459545)
Huan Peng (438848)
Gao-Feng Wang (2079625)
Jiang-Kuan Cui (526863)
Shi-Ming Liu (3459551)
Zhi-Gang Li (2436430)
Jun Yang (2084)
De-Liang Peng (3459548)

October 2015

KEGG enrichment analysis of the rescued genes exhibiting uncoordinated expression profiles. (XLSX 16...

Additional file 2: Table S1. of Large-scale identification of wheat genes resistant to cereal cyst nematode Heterodera avenae using comparative transcriptomic analysis

Ling-An Kong (185399)
Du-Qing Wu (3459554)
Wen-Kun Huang (3459545)
Huan Peng (438848)
Gao-Feng Wang (2079625)
Jiang-Kuan Cui (526863)
Shi-Ming Liu (3459551)
Zhi-Gang Li (2436430)
Jun Yang (2084)
De-Liang Peng (3459548)

October 2015

Number and percentage of H. avenae juveniles in wheat roots of both compatible and incompatible whea...

Additional file 3: Figure S2. of Large-scale identification of wheat genes resistant to cereal cyst nematode Heterodera avenae using comparative transcriptomic analysis

Ling-An Kong (185399)
Du-Qing Wu (3459554)
Wen-Kun Huang (3459545)
Huan Peng (438848)
Gao-Feng Wang (2079625)
Jiang-Kuan Cui (526863)
Shi-Ming Liu (3459551)
Zhi-Gang Li (2436430)
Jun Yang (2084)
De-Liang Peng (3459548)

October 2015

Identification of dramatically upregulated genes within VP1620 at three time points. Venn diagram sh...

Additional file 4: Table S3. of Genetic architecture of cyst nematode resistance revealed by genome-wide association study in soybean

T. Vuong (75458)
H. Sonah (3439628)
C. Meinhardt (3439637)
R. Deshmukh (3439640)
S. Kadam (3439643)
R. Nelson (3439631)
J. Shannon (3439625)
H. Nguyen (3439634)

August 2015

Differential expression pattern of candidate genes evaluated in Heterodera glycines infected cells c...

Additional file 6: Table S4. of Genetic architecture of cyst nematode resistance revealed by genome-wide association study in soybean

T. Vuong (75458)
H. Sonah (3439628)
C. Meinhardt (3439637)
R. Deshmukh (3439640)
S. Kadam (3439643)
R. Nelson (3439631)
J. Shannon (3439625)
H. Nguyen (3439634)

August 2015

A comparison of genome-wide association study (GWAS) loci identified in the present study and quanti...

Additional file 1: Table S1. of Genetic architecture of cyst nematode resistance revealed by genome-wide association study in soybean

T. Vuong (75458)
H. Sonah (3439628)
C. Meinhardt (3439637)
R. Deshmukh (3439640)
S. Kadam (3439643)
R. Nelson (3439631)
J. Shannon (3439625)
H. Nguyen (3439634)

August 2015

Plant introductions were characterized as known and novel sources of resistance to soybean cyst nema...

Additional file 16: Table S6. of A comparative analysis of nonhost resistance across the two Triticeae crop species wheat and barley

Rhoda Delventhal (4641691)
Jeyaraman Rajaraman (4641697)
Francesca Stefanato (4641700)
Sajid Rehman (4641685)
Reza Aghnoum (4641673)
Graham McGrann (3421589)
Marie Bolger (4641688)
Björn Usadel (53140)
Pete Hedley (4641694)
Lesley Boyd (4641682)
Rients Niks (4641676)
Patrick Schweizer (95873)
Ulrich Schaffrath (3496208)

December 2017

Primer combinations used for validation of microarray gene expression profiles by qRT- PCR (Addition...

Additional file 7: Table S5. of Genetic architecture of cyst nematode resistance revealed by genome-wide association study in soybean

T. Vuong (75458)
H. Sonah (3439628)
C. Meinhardt (3439637)
R. Deshmukh (3439640)
S. Kadam (3439643)
R. Nelson (3439631)
J. Shannon (3439625)
H. Nguyen (3439634)

August 2015

Five hundred fifty three soybean germplasm accessions with morphological characteristics, agronomic ...

Additional file 4: of Comprehensive evaluation of resistance effects of pyramiding lines with different broad-spectrum resistance genes against Magnaporthe oryzae in rice (Oryza sativa L.)

Yunyu Wu (748120)
Ning Xiao (223232)
Yu Chen (29959)
Ling Yu (330944)
Cunhong Pan (748121)
Yuhong Li (448146)
Xiaoxiang Zhang (628483)
Niansheng Huang (6418001)
Hongjuan Ji (6418004)
Zhengyuan Dai (748122)
Xijun Chen (4859197)
Aihong Li (385857)

March 2019

Table S3. Detail information of molecular markers tightly linked to different resistant genes. (DOCX...

Additional file 3: of Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes

Youlian Pan (68548)
Ziying Liu (4814301)
Hélène Rocheleau (786538)
François Fauteux (5699969)
Yunli Wang (3091296)
Curt McCartney (3166362)
Thérèse Ouellet (5699972)

August 2018

FHB resistant genes across all three resistant genotypes (A), common between two genotypes (B), and ...

Additional file 3: Table S2. of Genetic architecture of cyst nematode resistance revealed by genome-wide association study in soybean

T. Vuong (75458)
H. Sonah (3439628)
C. Meinhardt (3439637)
R. Deshmukh (3439640)
S. Kadam (3439643)
R. Nelson (3439631)
J. Shannon (3439625)
H. Nguyen (3439634)

August 2015

Functional annotation of candidate genes located at significant GWAS loci for SCN resistance in soyb...

Genetic and biological analysis of root lesion nematode (Pratylenchus thornei) resistance loci in wheat

Rahman, Muhammad Shefatur

January 2019

[Embargoed] Includes Appendix 1 -- Appendix 2 -- Movie Clip 6.1The root lesion nematode Pratylenchus...

Additional file 6: of Transcriptomic analysis of genes in soybean in response to Peronospora manshurica infection

Hang Dong (4754823)
Shuangfeng Shi (5237513)
Chong Zhang (418677)
Sihui Zhu (5237516)
Mei Li (217363)
Jie Tan (339881)
Yue Yu (260119)
Liping Lin (213510)
Shirong Jia (131035)
Xujing Wang (21247)
Yuanhua Wu (5237519)
Yuhui Liu (669854)

May 2018

Table S6. Primers used for qRT-PCR amplification of seven DEGs. Note: F: forward primers; R: reverse...

Additional file 4: of Identification and mapping of expressed genes associated with the 2DL QTL for fusarium head blight resistance in the wheat line Wuhan 1

Xinkun Hu (6723512)
Hélène Rocheleau (786538)
Curt McCartney (3166362)
Chiara Biselli (114669)
Paolo Bagnaresi (84939)
Margaret Balcerzak (6723515)
George Fedak (348480)
Zehong Yan (208778)
Giampiero Valè (114698)
Shahrokh Khanizadeh (6723518)
Thérèse Ouellet (5699972)

May 2019

Expression profile patterns for genes differentially expressed between R and S NIL and located on th...

Additional file 6: Table S5. of Differential transcriptomic responses to Fusarium graminearum infection in two barley quantitative trait loci associated with Fusarium head blight resistance

Yadong Huang (108296)
Lin Li (28817)
Kevin Smith (792017)
Gary Muehlbauer (3467255)

May 2016

Primer sequences and results of qPCR validation of RNA-Seq experiments. (XLSX 12Â kb

Additional file 6: Table S4. of Large-scale identification of wheat genes resistant to cereal cyst nematode Heterodera avenae using comparative transcriptomic analysis

Abstract

Extracted data

Additional file 6: Table S4. of Large-scale identification of wheat genes resistant to cereal cyst nematode Heterodera avenae using comparative transcriptomic analysis

Abstract

Extracted data

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