Unique variants identified in the single colony comparison analysis. (XLSX 45 kb
Mycobacterium tuberculosis resistance to anti-tuberculosis drugs is a major threat to global public ...
Study frequency table, Study frequency table, showing numbers and percentage of strains from each st...
Isolates Selected for WGS from Clusters Identified by Identical Genetic Fingerprints. This table sum...
Appendix E. Factors affecting the number of polymorphisms detected in sequences. (DOCX 18 kb
Variant Summary Tables, Summary tables of variants called in comparison to the H37rv reference, with...
Table S1. Sequencing statistics of the 18Â M. tuberculosis isolates. Note: A, B, C, and D indicate t...
Strain information and full results table for clinically-derived Malawi samples, in silico replicate...
Analysis and interpretation of Regions of Difference (RD) analysis in clinically-derived Malawi stra...
Figure S1. The profile of 1110 isolates. (a) The distribution of isolates in three studies. (b) The ...
SNP allele frequency spectrum. A large number of rare variants are observed. Peaks with higher allel...
Coverage plots illustrating four Regions of Differences (RDs) in clinically-derived Malawi strains. ...
De novo genome assembly statistics. File listing different measures used to check the quality of the...
The global distribution of geographic origin and lineage of the isolates. Lineages one to four are r...
Strains of the study, including their spoligotyping code (15 digits and 43 digits), PZA resistance, ...
Table S1. Investigating the presence of rpoB and 5KST diagnostic targets in M. tuberculosis complete...
Mycobacterium tuberculosis resistance to anti-tuberculosis drugs is a major threat to global public ...
Study frequency table, Study frequency table, showing numbers and percentage of strains from each st...
Isolates Selected for WGS from Clusters Identified by Identical Genetic Fingerprints. This table sum...
Appendix E. Factors affecting the number of polymorphisms detected in sequences. (DOCX 18 kb
Variant Summary Tables, Summary tables of variants called in comparison to the H37rv reference, with...
Table S1. Sequencing statistics of the 18Â M. tuberculosis isolates. Note: A, B, C, and D indicate t...
Strain information and full results table for clinically-derived Malawi samples, in silico replicate...
Analysis and interpretation of Regions of Difference (RD) analysis in clinically-derived Malawi stra...
Figure S1. The profile of 1110 isolates. (a) The distribution of isolates in three studies. (b) The ...
SNP allele frequency spectrum. A large number of rare variants are observed. Peaks with higher allel...
Coverage plots illustrating four Regions of Differences (RDs) in clinically-derived Malawi strains. ...
De novo genome assembly statistics. File listing different measures used to check the quality of the...
The global distribution of geographic origin and lineage of the isolates. Lineages one to four are r...
Strains of the study, including their spoligotyping code (15 digits and 43 digits), PZA resistance, ...
Table S1. Investigating the presence of rpoB and 5KST diagnostic targets in M. tuberculosis complete...
Mycobacterium tuberculosis resistance to anti-tuberculosis drugs is a major threat to global public ...
Study frequency table, Study frequency table, showing numbers and percentage of strains from each st...
Isolates Selected for WGS from Clusters Identified by Identical Genetic Fingerprints. This table sum...