Power comparison between SNP-based and local ancestry-based interaction tests when using inferred ancestry and 1Â M genotyped SNPs. Figure S2. Power comparison between SNP-based and local ancestry-based interaction tests when using a two steps approach. (PDF 555Â kb
Figure S1. Diagram of SNP filtering process. Figure S2. Frequency of SNP substitution types. Figure ...
Tajima’s D calculated across chromosome 4 using a 30 kbp sliding window by population. Chromosome 4:...
Figure S1. Genetic relationships between individuals before and after removing closely related indiv...
R script and corresponding input files to perform 1 ° of freedom interaction test between ancestry...
Figure S1. Quantile-quantile (QQ) plots of marginal and interaction test p-values. Table S1. Subject...
Comparison of SNP, SNP_LD, and gene-based similarity approaches. a The fraction of trait pairs with ...
Distribution of genetic heritability estimates for gene expression levels of A) all probes (n = 18,1...
The 299 optimal SNPs that can classify the nine ethnic groups with accuracy greater than 90Â %. The ...
Phenotypes and covariates. Table S2. Phenotype heritability. Table S3. Lambdas for all traits, calcu...
The distribution of minor allele frequencies of SNPs on chr 19 of the HapMap CEU individuals. (DOC 2...
Figure S1. Pipeline to identify the background genotype of 764. Figure S2. Quality scores for all po...
Transformed continuous outcomes tested for an association with global European ancestry in African A...
Figure S1. Depth of read per individual at each SNP in the 5.4âk SNP dataset. (A) Mean depth acros...
Pearson correlations (y-axis) of number of ROH, mean ROH size and mean sum of ROH between array data...
Top interactions from W-Z discovery set interaction test compared with simple logistic linear intera...
Figure S1. Diagram of SNP filtering process. Figure S2. Frequency of SNP substitution types. Figure ...
Tajima’s D calculated across chromosome 4 using a 30 kbp sliding window by population. Chromosome 4:...
Figure S1. Genetic relationships between individuals before and after removing closely related indiv...
R script and corresponding input files to perform 1 ° of freedom interaction test between ancestry...
Figure S1. Quantile-quantile (QQ) plots of marginal and interaction test p-values. Table S1. Subject...
Comparison of SNP, SNP_LD, and gene-based similarity approaches. a The fraction of trait pairs with ...
Distribution of genetic heritability estimates for gene expression levels of A) all probes (n = 18,1...
The 299 optimal SNPs that can classify the nine ethnic groups with accuracy greater than 90Â %. The ...
Phenotypes and covariates. Table S2. Phenotype heritability. Table S3. Lambdas for all traits, calcu...
The distribution of minor allele frequencies of SNPs on chr 19 of the HapMap CEU individuals. (DOC 2...
Figure S1. Pipeline to identify the background genotype of 764. Figure S2. Quality scores for all po...
Transformed continuous outcomes tested for an association with global European ancestry in African A...
Figure S1. Depth of read per individual at each SNP in the 5.4âk SNP dataset. (A) Mean depth acros...
Pearson correlations (y-axis) of number of ROH, mean ROH size and mean sum of ROH between array data...
Top interactions from W-Z discovery set interaction test compared with simple logistic linear intera...
Figure S1. Diagram of SNP filtering process. Figure S2. Frequency of SNP substitution types. Figure ...
Tajima’s D calculated across chromosome 4 using a 30 kbp sliding window by population. Chromosome 4:...
Figure S1. Genetic relationships between individuals before and after removing closely related indiv...