Additional file 2: Table S2. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Additional file 2: of Draft genome of a commonly misdiagnosed multidrug resistant pathogen Candida auris

Sharanya Chatterjee (3500720)
Shuba Alampalli (3500726)
Rishi Nageshan (3500714)
Sivarajan Chettiar (3500717)
Sangeeta Joshi (3500723)
Utpal Tatu (34518)

September 2015

Table S1. Number of reports regarding various Candida infections. Table S2: 95 Conserved Proteins in...

Additional file 2: Table S1. of The making of a genomic parasite - the Mothra family sheds light on the evolution of Helitrons in plants

Stefan Roffler (3429050)
Fabrizio Menardo (3429047)
Thomas Wicker (488457)

December 2015

Transcripts that were identified, encoding the Mothra PHRPA gene and its sister-family PHRPA and Rep...

Additional file 2: of Prediction of pathogenicity genes involved in adaptation to a lupin host in the fungal pathogens Botrytis cinerea and Sclerotinia sclerotiorum via comparative genomics

Mahsa Mousavi-Derazmahalleh (6524222)
Steven Chang (271406)
Geoff Thomas (5716226)
Mark Derbyshire (6712010)
Phillip Bayer (6712016)
David Edwards (5663)
Matthew Nelson (1902790)
William Erskine (1806280)
Francisco Lopez-Ruiz (6712022)
Jon Clements (614685)
James Hane (3539561)

May 2019

Information supporting effector prediction, orthology, functional annotations, mutations and PAV acr...

Additional file 1: Table S1. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of genes for PHI genes family identified in O. polyrhachis-furcata and nineteen other fun...

Additional file 8: Table S8. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of bacterial-like toxins identified in O. polyrhachis-furcata compared with other entomop...

Additional file 4: Table S4. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of genes following the MEROPS databases (peptidases) identified in O. polyrhachis-furcata...

Additional file 10: Table S10. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

List of nineteen fungal species selected from UniProt for orthology and comparative analysis with O....

Additional file 3: Table S3. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of subtilisins, trypsins, and aspartyl proteases identified in O. polyrhachis-furcata com...

Additional file 9: Table S9. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of transposable elements (TEs) identified in OPF compared with other entomopathogenic fun...

Additional file 6: Table S6. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of genes in different Polysaccharide Lyase (PL) families, following the Carbohydrate-Acti...

Additional file 5: Table S5. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of genes in different Glycoside Hydrolase (GH) families, following the Carbohydrate-Activ...

Additional file 7: Table S7. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of genes in different Carbohydrate Esterase (CE) families, following the Carbohydrate-Act...

Additional file 2: Table S2. of Evolutionary patchwork of an insecticidal toxin shared between plant-associated pseudomonads and the insect pathogens Photorhabdus and Xenorhabdus

Beat Ruffner (3493772)
Maria PĂŠchy-Tarr (3493778)
Monica HĂśfte (3429443)
Guido Bloemberg (287819)
JĂźrg Grunder (3493775)
Christoph Keel (276066)
Monika Maurhofer (276067)

August 2015

BLASTp analysis of P. protegens CHA0 Fit components against completed bacterial whole genome sequenc...

Additional file 2: Table S2. of Analysis of the genome sequence of Phomopsis longicolla: a fungal pathogen causing Phomopsis seed decay in soybean

Shuxian Li (176926)
Omar Darwish (2592148)
Nadim Alkharouf (2592151)
Bryan Musungu (4411912)
Benjamin Matthews (3440873)

September 2017

A list of horizontal transferred genes identified in the genome of Phomopsis longicolla isolate MSPL...

Additional file 2: of Genomics analysis of Aphanomyces spp. identifies a new class of oomycete effector associated with host adaptation

Elodie Gaulin (40047)
Michiel Pel (5119232)
Laurent Camborde (5119238)
Hélène San-Clemente (5119229)
Sarah Courbier (5119226)
Marie-Alexane Dupouy (5119235)
Juliette Lengellé (3295623)
Marine Veyssiere (5119223)
Aurélie Le Ru (280974)
Frédéric Grandjean (436283)
Richard Cordaux (11011)
Bouziane Moumen (189694)
Clément Gilbert (240856)
Liliana Cano (432612)
Jean-Marc Aury (129422)
Julie Guy (478463)
Patrick Wincker (8106)
Olivier Bouchez (104385)
Christophe Klopp (120981)
Bernard Dumas (40050)

April 2018

Figure S1. Phylogenetic analysis of the A. euteiches PL1 gene family. A maximum likelihood phylogeny...

Additional file 2: of Draft genome of a commonly misdiagnosed multidrug resistant pathogen Candida auris

Sharanya Chatterjee (3500720)
Shuba Alampalli (3500726)
Rishi Nageshan (3500714)
Sivarajan Chettiar (3500717)
Sangeeta Joshi (3500723)
Utpal Tatu (34518)

September 2015

Table S1. Number of reports regarding various Candida infections. Table S2: 95 Conserved Proteins in...

Additional file 2: Table S1. of The making of a genomic parasite - the Mothra family sheds light on the evolution of Helitrons in plants

Stefan Roffler (3429050)
Fabrizio Menardo (3429047)
Thomas Wicker (488457)

December 2015

Transcripts that were identified, encoding the Mothra PHRPA gene and its sister-family PHRPA and Rep...

Additional file 2: of Prediction of pathogenicity genes involved in adaptation to a lupin host in the fungal pathogens Botrytis cinerea and Sclerotinia sclerotiorum via comparative genomics

Mahsa Mousavi-Derazmahalleh (6524222)
Steven Chang (271406)
Geoff Thomas (5716226)
Mark Derbyshire (6712010)
Phillip Bayer (6712016)
David Edwards (5663)
Matthew Nelson (1902790)
William Erskine (1806280)
Francisco Lopez-Ruiz (6712022)
Jon Clements (614685)
James Hane (3539561)

May 2019

Information supporting effector prediction, orthology, functional annotations, mutations and PAV acr...

Additional file 1: Table S1. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of genes for PHI genes family identified in O. polyrhachis-furcata and nineteen other fun...

Additional file 8: Table S8. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of bacterial-like toxins identified in O. polyrhachis-furcata compared with other entomop...

Additional file 4: Table S4. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of genes following the MEROPS databases (peptidases) identified in O. polyrhachis-furcata...

Additional file 10: Table S10. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

List of nineteen fungal species selected from UniProt for orthology and comparative analysis with O....

Additional file 3: Table S3. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of subtilisins, trypsins, and aspartyl proteases identified in O. polyrhachis-furcata com...

Additional file 9: Table S9. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of transposable elements (TEs) identified in OPF compared with other entomopathogenic fun...

Additional file 6: Table S6. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of genes in different Polysaccharide Lyase (PL) families, following the Carbohydrate-Acti...

Additional file 5: Table S5. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of genes in different Glycoside Hydrolase (GH) families, following the Carbohydrate-Activ...

Additional file 7: Table S7. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Duangdao Wichadakul (3540737)
Noppol Kobmoo (3272499)
Supawadee Ingsriswang (3540740)
Sithichoke Tangphatsornruang (399948)
Duriya Chantasingh (3540731)
Janet Luangsa-ard (3540734)
Lily Eurwilaichitr (746491)

October 2015

The number of genes in different Carbohydrate Esterase (CE) families, following the Carbohydrate-Act...

Additional file 2: Table S2. of Evolutionary patchwork of an insecticidal toxin shared between plant-associated pseudomonads and the insect pathogens Photorhabdus and Xenorhabdus

Beat Ruffner (3493772)
Maria PĂŠchy-Tarr (3493778)
Monica HĂśfte (3429443)
Guido Bloemberg (287819)
JĂźrg Grunder (3493775)
Christoph Keel (276066)
Monika Maurhofer (276067)

August 2015

BLASTp analysis of P. protegens CHA0 Fit components against completed bacterial whole genome sequenc...

Additional file 2: Table S2. of Analysis of the genome sequence of Phomopsis longicolla: a fungal pathogen causing Phomopsis seed decay in soybean

Shuxian Li (176926)
Omar Darwish (2592148)
Nadim Alkharouf (2592151)
Bryan Musungu (4411912)
Benjamin Matthews (3440873)

September 2017

A list of horizontal transferred genes identified in the genome of Phomopsis longicolla isolate MSPL...

Additional file 2: of Genomics analysis of Aphanomyces spp. identifies a new class of oomycete effector associated with host adaptation

Elodie Gaulin (40047)
Michiel Pel (5119232)
Laurent Camborde (5119238)
Hélène San-Clemente (5119229)
Sarah Courbier (5119226)
Marie-Alexane Dupouy (5119235)
Juliette Lengellé (3295623)
Marine Veyssiere (5119223)
Aurélie Le Ru (280974)
Frédéric Grandjean (436283)
Richard Cordaux (11011)
Bouziane Moumen (189694)
Clément Gilbert (240856)
Liliana Cano (432612)
Jean-Marc Aury (129422)
Julie Guy (478463)
Patrick Wincker (8106)
Olivier Bouchez (104385)
Christophe Klopp (120981)
Bernard Dumas (40050)

April 2018

Figure S1. Phylogenetic analysis of the A. euteiches PL1 gene family. A maximum likelihood phylogeny...

Additional file 2: of Draft genome of a commonly misdiagnosed multidrug resistant pathogen Candida auris

Sharanya Chatterjee (3500720)
Shuba Alampalli (3500726)
Rishi Nageshan (3500714)
Sivarajan Chettiar (3500717)
Sangeeta Joshi (3500723)
Utpal Tatu (34518)

September 2015

Table S1. Number of reports regarding various Candida infections. Table S2: 95 Conserved Proteins in...

Additional file 2: Table S1. of The making of a genomic parasite - the Mothra family sheds light on the evolution of Helitrons in plants

Stefan Roffler (3429050)
Fabrizio Menardo (3429047)
Thomas Wicker (488457)

December 2015

Transcripts that were identified, encoding the Mothra PHRPA gene and its sister-family PHRPA and Rep...

Additional file 2: of Prediction of pathogenicity genes involved in adaptation to a lupin host in the fungal pathogens Botrytis cinerea and Sclerotinia sclerotiorum via comparative genomics

Mahsa Mousavi-Derazmahalleh (6524222)
Steven Chang (271406)
Geoff Thomas (5716226)
Mark Derbyshire (6712010)
Phillip Bayer (6712016)
David Edwards (5663)
Matthew Nelson (1902790)
William Erskine (1806280)
Francisco Lopez-Ruiz (6712022)
Jon Clements (614685)
James Hane (3539561)

May 2019

Information supporting effector prediction, orthology, functional annotations, mutations and PAV acr...

Additional file 2: Table S2. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Abstract

Extracted data

Additional file 2: Table S2. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

Abstract

Extracted data

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