Additional file 2: Table S2. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Additional file 3: of Bacterial endosymbiont Cardinium cSfur genome sequence provides insights for understanding the symbiotic relationship in Sogatella furcifera host

Zhen Zeng (238754)
Yating Fu (5772047)
Dongyang Guo (5772050)
Yuxuan Wu (382359)
Olugbenga Ajayi (5772053)
Qingfa Wu (6499)

September 2018

Clusters of orthologous genes (COG) functional classification of the Cardinium cSfur genome (gene ho...

Additional file 1: Table S1. of High quality draft genome sequence of the moderately halophilic bacterium Pontibacillus yanchengensis Y32T and comparison among Pontibacillus genomes

Jing Huang (41604)
Zi xu Qiao (3422471)
Jing wei Tang (3422474)
Gejiao Wang (115157)

November 2015

COG functional categories of the 1651 genes unique to P.yanchengensis Y32T. Table S2 Species distrib...

Additional file 1 of Comparative genomics reveals multiple pathways to mutualism for tick-borne pathogens

Svetlana Lockwood (193901)
Kelly Brayton (3523091)
Shira Broschat (3530111)

July 2016

Organisms and their protein sequences. Table S1. Organisms and their protein sequence files in the c...

Additional file 6: Table S6. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Xenorhabdus bovienii genes predicted to encode two-component regulatory systems. Description: Table ...

Additional file 3: Table S3. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Bacterial genes predicted to encode select symbiotic activities. Description: Table of all genes ide...

Additional file 4: Table S4. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Regulatory proteins found within X. bovienii strains. Description: Table of all genes predicted to e...

Additional file 1: Table S1. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Global metabolic analysis of Xenorhabdus bovienii strains. Description: Table of all metabolic pathw...

Additional file 5: Table S5. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Xenorhabdus bovienii genes predicted to encode LysR family transcription factors. Description: Table...

Additional file 7: Table S7. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Annotated toxin genes. Description: Table of all genes within all X. bovienii strains predicted to e...

Additional file 10: Table S9. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Tc subunit genes from X. bovienii genomes. Description: Table of all predicted Tc toxin subunit prot...

Additional file 8: Figure S1. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Distribution of amino acid sequence divergence in proteins. Description: Image of the amino acid seq...

Additional file 11: Figure S2. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Phylogenies of TC toxin amino acid sequences. Description: Image of the phylogenies built from amino...

Additional file 3: Table S2. of Genome overview of eight Candida boidinii strains isolated from human activities and wild environments

Salvatore Camiolo (212282)
Cinzia Porru (4638559)
Antonio Benítez-Cabello (4638571)
Francisco Rodríguez-Gómez (4638565)
Beatríz Calero-Delgado (4638562)
Andrea Porceddu (19094)
Marilena Budroni (698244)
Ilaria Mannazzu (698243)
Rufino Jiménez-Díaz (4638574)
Francisco Arroyo-López (4638568)

December 2017

Number of predicted genes showing high homology (e-value < 0.0001) with gene models predicted in sev...

Additional file 2: of Type VI secretion systems of human gut Bacteroidales segregate into three genetic architectures, two of which are contained on mobile genetic elements

Michael Coyne (3514196)
Kevin Roelofs (2213431)
Laurie Comstock (3514190)

January 2016

Enumeration of Bacterodales T6SS proteins by genetic architecture and cluster. (XLSX 12Â kb

Additional file 5: Table S3. of Comparative genomics of host adaptive traits in Xanthomonas translucens pv. graminis

Lena Hersemann (3618917)
Daniel Wibberg (839038)
Jochen Blom (104512)
Alexander Goesmann (11354)
Franco Widmer (3171993)
Frank-Jörg Vorhölter (86202)
Roland Kölliker (3474368)

January 2017

Type VI secretion system homologues identified in Xtg2 and their corresponding COG numbers (E-value ...

Additional file 3: of Bacterial endosymbiont Cardinium cSfur genome sequence provides insights for understanding the symbiotic relationship in Sogatella furcifera host

Zhen Zeng (238754)
Yating Fu (5772047)
Dongyang Guo (5772050)
Yuxuan Wu (382359)
Olugbenga Ajayi (5772053)
Qingfa Wu (6499)

September 2018

Clusters of orthologous genes (COG) functional classification of the Cardinium cSfur genome (gene ho...

Additional file 1: Table S1. of High quality draft genome sequence of the moderately halophilic bacterium Pontibacillus yanchengensis Y32T and comparison among Pontibacillus genomes

Jing Huang (41604)
Zi xu Qiao (3422471)
Jing wei Tang (3422474)
Gejiao Wang (115157)

November 2015

COG functional categories of the 1651 genes unique to P.yanchengensis Y32T. Table S2 Species distrib...

Additional file 1 of Comparative genomics reveals multiple pathways to mutualism for tick-borne pathogens

Svetlana Lockwood (193901)
Kelly Brayton (3523091)
Shira Broschat (3530111)

July 2016

Organisms and their protein sequences. Table S1. Organisms and their protein sequence files in the c...

Additional file 6: Table S6. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Xenorhabdus bovienii genes predicted to encode two-component regulatory systems. Description: Table ...

Additional file 3: Table S3. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Bacterial genes predicted to encode select symbiotic activities. Description: Table of all genes ide...

Additional file 4: Table S4. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Regulatory proteins found within X. bovienii strains. Description: Table of all genes predicted to e...

Additional file 1: Table S1. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Global metabolic analysis of Xenorhabdus bovienii strains. Description: Table of all metabolic pathw...

Additional file 5: Table S5. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Xenorhabdus bovienii genes predicted to encode LysR family transcription factors. Description: Table...

Additional file 7: Table S7. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Annotated toxin genes. Description: Table of all genes within all X. bovienii strains predicted to e...

Additional file 10: Table S9. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Tc subunit genes from X. bovienii genomes. Description: Table of all predicted Tc toxin subunit prot...

Additional file 8: Figure S1. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Distribution of amino acid sequence divergence in proteins. Description: Image of the amino acid seq...

Additional file 11: Figure S2. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Kristen Murfin (3533495)
Amy Whooley (3533498)
Jonathan Klassen (1300188)
Heidi Goodrich-Blair (81292)

November 2015

Phylogenies of TC toxin amino acid sequences. Description: Image of the phylogenies built from amino...

Additional file 3: Table S2. of Genome overview of eight Candida boidinii strains isolated from human activities and wild environments

Salvatore Camiolo (212282)
Cinzia Porru (4638559)
Antonio Benítez-Cabello (4638571)
Francisco Rodríguez-Gómez (4638565)
Beatríz Calero-Delgado (4638562)
Andrea Porceddu (19094)
Marilena Budroni (698244)
Ilaria Mannazzu (698243)
Rufino Jiménez-Díaz (4638574)
Francisco Arroyo-López (4638568)

December 2017

Number of predicted genes showing high homology (e-value < 0.0001) with gene models predicted in sev...

Additional file 2: of Type VI secretion systems of human gut Bacteroidales segregate into three genetic architectures, two of which are contained on mobile genetic elements

Michael Coyne (3514196)
Kevin Roelofs (2213431)
Laurie Comstock (3514190)

January 2016

Enumeration of Bacterodales T6SS proteins by genetic architecture and cluster. (XLSX 12Â kb

Additional file 5: Table S3. of Comparative genomics of host adaptive traits in Xanthomonas translucens pv. graminis

Lena Hersemann (3618917)
Daniel Wibberg (839038)
Jochen Blom (104512)
Alexander Goesmann (11354)
Franco Widmer (3171993)
Frank-Jörg Vorhölter (86202)
Roland Kölliker (3474368)

January 2017

Type VI secretion system homologues identified in Xtg2 and their corresponding COG numbers (E-value ...

Additional file 3: of Bacterial endosymbiont Cardinium cSfur genome sequence provides insights for understanding the symbiotic relationship in Sogatella furcifera host

Zhen Zeng (238754)
Yating Fu (5772047)
Dongyang Guo (5772050)
Yuxuan Wu (382359)
Olugbenga Ajayi (5772053)
Qingfa Wu (6499)

September 2018

Clusters of orthologous genes (COG) functional classification of the Cardinium cSfur genome (gene ho...

Additional file 1: Table S1. of High quality draft genome sequence of the moderately halophilic bacterium Pontibacillus yanchengensis Y32T and comparison among Pontibacillus genomes

Jing Huang (41604)
Zi xu Qiao (3422471)
Jing wei Tang (3422474)
Gejiao Wang (115157)

November 2015

COG functional categories of the 1651 genes unique to P.yanchengensis Y32T. Table S2 Species distrib...

Additional file 1 of Comparative genomics reveals multiple pathways to mutualism for tick-borne pathogens

Svetlana Lockwood (193901)
Kelly Brayton (3523091)
Shira Broschat (3530111)

July 2016

Organisms and their protein sequences. Table S1. Organisms and their protein sequence files in the c...

Additional file 2: Table S2. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Abstract

Extracted data

Additional file 2: Table S2. of Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

Abstract

Extracted data

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