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Data Protection

Barson_et_al_GenABEL

Nicola J. Barson (3288414)
Tuku Aykanat (3288417)
Kjetil Hindar (3276693)
Matthew Baranski (92560)
Geir H. Bolstad (3262491)
Peder Fiske (3288429)
Céleste Jacq (3288411)
Arne J. Jensen (208079)
Susan E. Johnston (3242940)
Sten Karlsson (3276702)
Matthew Kent (497743)
Thomas Moen (90022)
Eero Niemelä (497746)
Torfinn Nome (117578)
Tor F. Næsje (3288423)
Panu Orell (3242934)
Atso Romakkaniemi (837387)
Harald Sægrov (3288426)
Kurt Urdal (3288420)
Jaakko Erkinaro (3242937)
Sigbjørn Lien (90027)
Craig R. Primmer (543285)

Publication date

November 2016

DOI

10.5061/dryad.23h4q/2

Abstract

File in GenABEL format containing SNP genotype and individual phenotype informatio

Extracted data

Related items

genepop_file_4357_SNPs

Faust, Ellika
Halvorsen, Kim T
Andersen, Per
Knutsen, Halvor
Carl, André

February 2018

Text file (genepop input format) containing the genotypes used for population genomics analysis. The...

B. schlosseri microsatellite data

Anaïs Lacoursière-Roussel (3243858)
Christopher W. McKindsey (242796)
Dan G. Bock (3243855)
Melania E. Cristescu (111050)
Frédéric Guichard (177600)
Philippe Girard (235881)
Pierre Legendre (298160)

October 2016

Genepop-formatted file containing individual genotype data (10 microsatellite loci

Limborg et al. SNP genotypes

Limborg, Morten T.
Helyar, Sarah J.
De Bruyn, Mark
Taylor, Martin I.
Nielsen, Einar E.
Ogden, Rob
Carvalho, Gary R.
Bekkevold, Dorte

June 2013

This file contains raw SNP genotypes coded as 1/2 for Atlantic herring (Clupea harengus). The genoty...

Barson_et_al_GenABEL

Barson, Nicola J.
Aykanat, Tuku
Hindar, Kjetil
Baranski, Matthew
Bolstad, Geir H.
Fiske, Peder
Jacq, Céleste
Jensen, Arne J.
Johnston, Susan E.
Karlsson, Sten
Kent, Matthew
Moen, Thomas
Niemelä, Eero
Nome, Torfinn
Næsje, Tor F.
Orell, Panu
Romakkaniemi, Atso
Sægrov, Harald
Urdal, Kurt
Erkinaro, Jaakko
Lien, Sigbjørn
Primmer, Craig R.

November 2015

File in GenABEL format containing SNP genotype and individual phenotype informatio

Structure file for genotype assignment

Roe, Amanda D.
MacQuarrie, Chris J. K.
Gros-Louis, Marie-Claude
Simpson, J. Dale
Lamarche, Josyanne
Beardmore, Tannis
Thompson, Stacey L.
Tanguay, Philippe
Isabel, Nathalie

April 2014

This file contains the recoded SNP data for input into Structure to estimate admixture in each indiv...

Genepop_GreenlandIcelandCanada

Therkildsen, Nina Overgaard
Hemmer-Hansen, Jakob
Hedeholm, Rasmus Berg
Wisz, Mary S.
Meldrup, Dorte
Bonanomi, Sara
Retzel, Anja
Olsen, Steffen Malskær
Nielsen, Einar Eg
Pampoulie, Christophe

March 2013

The SNP genotype data from file "Individual_info_and_genotypes.txt" presented in Genepop format

Wragg, David
Mwacharo, Joram M.
Hocking, Paul M.
Hanotte, Olivier
Alcalde, Jose A.

January 2012

Phenotype file for the accompanying genotype file. Present in a format compatible for use with GenAB...

Fountain, Emily
Kang, Jung koo
Tempel, Douglas J.
Palsbøll, Per J.
Pauli, Jonathan N.
Peery, M. Zachariah

October 2017

SNP genotypes for individuals used in the ABC model. File is formatted for the program code used

Carmen Amador (122097)
Ben J. Hayes (175151)
Hans D. Daetwyler (270245)
Cooperative Research Centre for Sheep Industry Innovation (Sheep CRC) (3327285)

November 2016

The file contains the genotypes of 188 pure Merino and 188 pure Poll Dorset. En each row of the file...

Genotyping data using molecular markers

M. A. Rouf Mian (246628)
Tae-Hwan Jun (246626)
Andy P. Michel (3267432)

November 2016

This file contains the genotype data generated using single nucleotide polymorphism (SNP) and simple...

Phenotypes_Genotypes

Noutsos, Christos
Borevitz, Justin O.
Hodges, Scott A.

October 2014

This file contains the individuals we have collected from the South Sierra mountains as well as the ...

snpChipGWASPhenotypes

Marty Kardos (3258909)
Arild Husby (231106)
S. Eryn McFarlane (3095397)
Anna Qvarnström (77863)
Hans Ellegren (82405)

October 2016

This file contains the phenotype information for the SNP chip-based GWA analysis. The file contains ...

2497_indiv_phenotype

Anna W. Santure (3197772)
Isabelle De Cauwer (3241266)
Matthew R. Robinson (3241263)
Jocelyn Poissant (3241260)
Ben C. Sheldon (117245)
Jon Slate (23132)

October 2016

2497_indiv_phenotype.txt file. This file contains the phenotypes used in the analysis. Note that phe...

Chromosomal_SNPs-InDels

Oladeinde, Adelumola
Cook, Kimberly
Orlek, Alex
Zock, Greg
Herrington, Kyler
Cox, Nelson
Lawrence, Jodie
Hall, Carolina

November 2018

Variant Call Format files for chromosome encoded SNPs/InDels identified for each isolate from this s...

SNP sequences and GENALEX file

Hanne De Kort (3248907)
Katrien Vandepitte (424035)
Joachim Mergeay (196885)
Kristine Vander Mijnsbrugge (3291585)
Olivier Honnay (387662)

November 2016

Sequences of the 250 SNPs (together with their functional annotations) are available in tab 1 of the...

genepop_file_4357_SNPs

Faust, Ellika
Halvorsen, Kim T
Andersen, Per
Knutsen, Halvor
Carl, André

February 2018

Text file (genepop input format) containing the genotypes used for population genomics analysis. The...

B. schlosseri microsatellite data

Anaïs Lacoursière-Roussel (3243858)
Christopher W. McKindsey (242796)
Dan G. Bock (3243855)
Melania E. Cristescu (111050)
Frédéric Guichard (177600)
Philippe Girard (235881)
Pierre Legendre (298160)

October 2016

Genepop-formatted file containing individual genotype data (10 microsatellite loci

Limborg et al. SNP genotypes

Limborg, Morten T.
Helyar, Sarah J.
De Bruyn, Mark
Taylor, Martin I.
Nielsen, Einar E.
Ogden, Rob
Carvalho, Gary R.
Bekkevold, Dorte

June 2013

This file contains raw SNP genotypes coded as 1/2 for Atlantic herring (Clupea harengus). The genoty...

Barson_et_al_GenABEL

Barson, Nicola J.
Aykanat, Tuku
Hindar, Kjetil
Baranski, Matthew
Bolstad, Geir H.
Fiske, Peder
Jacq, Céleste
Jensen, Arne J.
Johnston, Susan E.
Karlsson, Sten
Kent, Matthew
Moen, Thomas
Niemelä, Eero
Nome, Torfinn
Næsje, Tor F.
Orell, Panu
Romakkaniemi, Atso
Sægrov, Harald
Urdal, Kurt
Erkinaro, Jaakko
Lien, Sigbjørn
Primmer, Craig R.

November 2015

File in GenABEL format containing SNP genotype and individual phenotype informatio

Structure file for genotype assignment

Roe, Amanda D.
MacQuarrie, Chris J. K.
Gros-Louis, Marie-Claude
Simpson, J. Dale
Lamarche, Josyanne
Beardmore, Tannis
Thompson, Stacey L.
Tanguay, Philippe
Isabel, Nathalie

April 2014

This file contains the recoded SNP data for input into Structure to estimate admixture in each indiv...

Genepop_GreenlandIcelandCanada

Therkildsen, Nina Overgaard
Hemmer-Hansen, Jakob
Hedeholm, Rasmus Berg
Wisz, Mary S.
Meldrup, Dorte
Bonanomi, Sara
Retzel, Anja
Olsen, Steffen Malskær
Nielsen, Einar Eg
Pampoulie, Christophe

March 2013

The SNP genotype data from file "Individual_info_and_genotypes.txt" presented in Genepop format

Wragg, David
Mwacharo, Joram M.
Hocking, Paul M.
Hanotte, Olivier
Alcalde, Jose A.

January 2012

Phenotype file for the accompanying genotype file. Present in a format compatible for use with GenAB...

Fountain, Emily
Kang, Jung koo
Tempel, Douglas J.
Palsbøll, Per J.
Pauli, Jonathan N.
Peery, M. Zachariah

October 2017

SNP genotypes for individuals used in the ABC model. File is formatted for the program code used

Carmen Amador (122097)
Ben J. Hayes (175151)
Hans D. Daetwyler (270245)
Cooperative Research Centre for Sheep Industry Innovation (Sheep CRC) (3327285)

November 2016

The file contains the genotypes of 188 pure Merino and 188 pure Poll Dorset. En each row of the file...

Genotyping data using molecular markers

M. A. Rouf Mian (246628)
Tae-Hwan Jun (246626)
Andy P. Michel (3267432)

November 2016

This file contains the genotype data generated using single nucleotide polymorphism (SNP) and simple...

Phenotypes_Genotypes

Noutsos, Christos
Borevitz, Justin O.
Hodges, Scott A.

October 2014

This file contains the individuals we have collected from the South Sierra mountains as well as the ...

snpChipGWASPhenotypes

Marty Kardos (3258909)
Arild Husby (231106)
S. Eryn McFarlane (3095397)
Anna Qvarnström (77863)
Hans Ellegren (82405)

October 2016

This file contains the phenotype information for the SNP chip-based GWA analysis. The file contains ...

2497_indiv_phenotype

Anna W. Santure (3197772)
Isabelle De Cauwer (3241266)
Matthew R. Robinson (3241263)
Jocelyn Poissant (3241260)
Ben C. Sheldon (117245)
Jon Slate (23132)

October 2016

2497_indiv_phenotype.txt file. This file contains the phenotypes used in the analysis. Note that phe...

Chromosomal_SNPs-InDels

Oladeinde, Adelumola
Cook, Kimberly
Orlek, Alex
Zock, Greg
Herrington, Kyler
Cox, Nelson
Lawrence, Jodie
Hall, Carolina

November 2018

Variant Call Format files for chromosome encoded SNPs/InDels identified for each isolate from this s...

SNP sequences and GENALEX file

Hanne De Kort (3248907)
Katrien Vandepitte (424035)
Joachim Mergeay (196885)
Kristine Vander Mijnsbrugge (3291585)
Olivier Honnay (387662)

November 2016

Sequences of the 250 SNPs (together with their functional annotations) are available in tab 1 of the...

genepop_file_4357_SNPs

Faust, Ellika
Halvorsen, Kim T
Andersen, Per
Knutsen, Halvor
Carl, André

February 2018

Text file (genepop input format) containing the genotypes used for population genomics analysis. The...

B. schlosseri microsatellite data

Anaïs Lacoursière-Roussel (3243858)
Christopher W. McKindsey (242796)
Dan G. Bock (3243855)
Melania E. Cristescu (111050)
Frédéric Guichard (177600)
Philippe Girard (235881)
Pierre Legendre (298160)

October 2016

Genepop-formatted file containing individual genotype data (10 microsatellite loci

Limborg et al. SNP genotypes

Limborg, Morten T.
Helyar, Sarah J.
De Bruyn, Mark
Taylor, Martin I.
Nielsen, Einar E.
Ogden, Rob
Carvalho, Gary R.
Bekkevold, Dorte

June 2013

This file contains raw SNP genotypes coded as 1/2 for Atlantic herring (Clupea harengus). The genoty...