Additional file 1: of Working draft genome sequence of the mesophilic acetate oxidizing bacterium Syntrophaceticus schinkii strain Sp3

Additional file 3: of Genome-scale analysis of syngas fermenting acetogenic bacteria reveals the translational regulation for its autotrophic growth

Yoseb Song (5809286)
Jongoh Shin (6006008)
Sangrak Jin (6006011)
Jung-Kul Lee (451432)
Dong Kim (443919)
Sun Kim (28274)
Suhyung Cho (60618)
Byung-Kwan Cho (143434)

November 2018

Table S3. COG functional assignments of differently expressed genes (DEGs) in Eubacterium limosum be...

Additional file 2: of Complete genome sequence of the nitrogen-fixing bacterium Azospirillum humicireducens type strain SgZ-5T

Zhen Yu (203197)
Guiqin Yang (3468794)
Xiaoming Liu (47653)
Yueqiang Wang (564526)
Li Zhuang (120307)
Shungui Zhou (1659310)

October 2018

Genes of A. humicireducens SgZ-5T involved in biosynthesis of tryptophan. (DOCX 16Â kb

Additional file 3: of Complete genome sequence of the nitrogen-fixing bacterium Azospirillum humicireducens type strain SgZ-5T

Zhen Yu (203197)
Guiqin Yang (3468794)
Xiaoming Liu (47653)
Yueqiang Wang (564526)
Li Zhuang (120307)
Shungui Zhou (1659310)

October 2018

Genes of A. humicireducens SgZ-5T located in a terpene gene cluster. (DOCX 16Â kb

Additional file 2: Table S1. of High-quality-draft genome sequence of the fermenting bacterium Anaerobium acetethylicum type strain GluBS11T (DSM 29698)

Yogita Patil (3760093)
Nicolai MĂźller (3760102)
Bernhard Schink (382427)
William Whitman (3426341)
Marcel Huntemann (34103)
Alicia Clum (111778)
Manoj Pillay (3333165)
Krishnaveni Palaniappan (3333150)
Neha Varghese (146576)
Natalia Mikhailova (224155)
Dimitrios Stamatis (3760096)
T. Reddy (3433427)
Chris Daum (2815984)
Nicole Shapiro (3333144)
Natalia Ivanova (8850)
Nikos Kyrpides (8859)
Tanja Woyke (111784)
Madan Junghare (3760099)

February 2017

IMG annotated functions of selected putative key enzymes involved in the metabolic pathways identifi...

Additional file 1: of Draft genome sequence of Fermentimonas caenicola strain SIT8, isolated from the human gut

Mamadou Beye (5090471)
Sofiane Bakour (184734)
Sory Traore (5090477)
Jaishriram Rathored (3438773)
NoĂŠmie Labas (5090474)
Didier Raoult (3833)
Pierre-Edouard Fournier (13453)

April 2018

Table S1. Fatty acid composition of Fermentimonas caenicola strain SIT8. Table S2. Number of specifi...

Additional file 1: Table S1. of Complete genome sequence of the molybdenum-resistant bacterium Bacillus subtilis strain LM 4â2

Xiao-Yan You (3534731)
Hui Wang (30400)
Guang-Yue Ren (3534725)
Jing-Jing Li (216056)
Xu Duan (3534722)
Hua-Jun Zheng (176350)
Zheng-Qiang Jiang (3534728)

December 2015

The results of ANI, AAI and GGDH value between genomes of strain LM 4-2 and other 30 complete sequen...

Additional file 6: of Genome-scale analysis of syngas fermenting acetogenic bacteria reveals the translational regulation for its autotrophic growth

Yoseb Song (5809286)
Jongoh Shin (6006008)
Sangrak Jin (6006011)
Jung-Kul Lee (451432)
Dong Kim (443919)
Sun Kim (28274)
Suhyung Cho (60618)
Byung-Kwan Cho (143434)

November 2018

Table S6. Transcription profile of genes associated with energy conservation (DOCX 17 kb

Additional file 1: of High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7T

Xian Xia (398501)
Jiahong Li (1608247)
Zijie Zhou (4890928)
Dan Wang (34472)
Jing Huang (41604)
Gejiao Wang (115157)

October 2018

Table S1. Putative heavy metal(loid)s resistance proteins. Table S2. Putative nucleotide sugars bios...

Additional file 1: of Genome-scale analysis of syngas fermenting acetogenic bacteria reveals the translational regulation for its autotrophic growth

Yoseb Song (5809286)
Jongoh Shin (6006008)
Sangrak Jin (6006011)
Jung-Kul Lee (451432)
Dong Kim (443919)
Sun Kim (28274)
Suhyung Cho (60618)
Byung-Kwan Cho (143434)

November 2018

Table S1. Transcription expression of genes in Eubacterium limosum under heterotrophic and autotroph...

Additional file 2: Table S2. of Genome sequencing and analysis of the first spontaneous Nanosilver resistant bacterium Proteus mirabilis strain SCDR1

Amr Saeb (4614241)
Khalid Al-Rubeaan (526186)
Mohamed Abouelhoda (3463481)
Manojkumar Selvaraju (4614238)
Hamsa Tayeb (4614244)

November 2017

Distribution of unique gene counts amongst pathways Classes and subclasses. (DOCX 16 kb

Additional file 2: Table S2. of First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77

Ram Singh (594217)
Sonam Gaba (3431615)
Ajar Yadav (3431618)
Prakhar Gaur (125760)
Sneha Gulati (3431612)
Rajeev Kaushik (3431609)
Anil Saxena (3431621)

August 2016

Quantitative analysis of amino acids content of Arthrobacter agilis strain L77 by HPLC. (DOCX 15Â kb

Additional file 1: Table S1. of First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77

Ram Singh (594217)
Sonam Gaba (3431615)
Ajar Yadav (3431618)
Prakhar Gaur (125760)
Sneha Gulati (3431612)
Rajeev Kaushik (3431609)
Anil Saxena (3431621)

August 2016

Quantitative analysis of organic acid and sugars/polyols from Arthrobacter agilis strain L77 by HPLC...

Genome-Guided Analysis and Whole Transcriptome Profiling of the Mesophilic Syntrophic Acetate Oxidising Bacterium Syntrophaceticus schinkii.

Shahid Manzoor
Erik Bongcam-Rudloff
Anna Schnürer
Bettina Müller

January 2016

Syntrophaceticus schinkii is a mesophilic, anaerobic bacterium capable of oxidising acetate to CO2 a...

Additional file 1: Figure S1. of Complete genome sequence of Methanospirillum hungatei type strain JF1

Robert Gunsalus (3535415)
Lauren Cook (3535424)
Bryan Crable (2508007)
Lars Rohlin (2507734)
Erin McDonald (3535409)
Housna Mouttaki (3535427)
Jessica Sieber (3535412)
Nicole Poweleit (3535421)
Hong Zhou (29614)
Alla Lapidus (6321)
Hajnalka Daligault (226568)
Miriam Land (34698)
Paul Gilna (53476)
Natalia Ivanova (8850)
Nikos Kyrpides (8859)
David Culley (3535430)
Michael McInerney (3535418)

January 2016

Best reciprocal protein hits for M. hungatei JF1 ORFs with other genomes. (DOCX 89Â kb

Additional file 7: of Genome-scale analysis of syngas fermenting acetogenic bacteria reveals the translational regulation for its autotrophic growth

Yoseb Song (5809286)
Jongoh Shin (6006008)
Sangrak Jin (6006011)
Jung-Kul Lee (451432)
Dong Kim (443919)
Sun Kim (28274)
Suhyung Cho (60618)
Byung-Kwan Cho (143434)

November 2018

Table S7. Transcription profile of genes associated with central carbon metabolism (DOCX 20 kb

Additional file 3: of Genome-scale analysis of syngas fermenting acetogenic bacteria reveals the translational regulation for its autotrophic growth

Yoseb Song (5809286)
Jongoh Shin (6006008)
Sangrak Jin (6006011)
Jung-Kul Lee (451432)
Dong Kim (443919)
Sun Kim (28274)
Suhyung Cho (60618)
Byung-Kwan Cho (143434)

November 2018

Table S3. COG functional assignments of differently expressed genes (DEGs) in Eubacterium limosum be...

Additional file 2: of Complete genome sequence of the nitrogen-fixing bacterium Azospirillum humicireducens type strain SgZ-5T

Zhen Yu (203197)
Guiqin Yang (3468794)
Xiaoming Liu (47653)
Yueqiang Wang (564526)
Li Zhuang (120307)
Shungui Zhou (1659310)

October 2018

Genes of A. humicireducens SgZ-5T involved in biosynthesis of tryptophan. (DOCX 16Â kb

Additional file 3: of Complete genome sequence of the nitrogen-fixing bacterium Azospirillum humicireducens type strain SgZ-5T

Zhen Yu (203197)
Guiqin Yang (3468794)
Xiaoming Liu (47653)
Yueqiang Wang (564526)
Li Zhuang (120307)
Shungui Zhou (1659310)

October 2018

Genes of A. humicireducens SgZ-5T located in a terpene gene cluster. (DOCX 16Â kb

Additional file 2: Table S1. of High-quality-draft genome sequence of the fermenting bacterium Anaerobium acetethylicum type strain GluBS11T (DSM 29698)

Yogita Patil (3760093)
Nicolai MĂźller (3760102)
Bernhard Schink (382427)
William Whitman (3426341)
Marcel Huntemann (34103)
Alicia Clum (111778)
Manoj Pillay (3333165)
Krishnaveni Palaniappan (3333150)
Neha Varghese (146576)
Natalia Mikhailova (224155)
Dimitrios Stamatis (3760096)
T. Reddy (3433427)
Chris Daum (2815984)
Nicole Shapiro (3333144)
Natalia Ivanova (8850)
Nikos Kyrpides (8859)
Tanja Woyke (111784)
Madan Junghare (3760099)

February 2017

IMG annotated functions of selected putative key enzymes involved in the metabolic pathways identifi...

Additional file 1: of Draft genome sequence of Fermentimonas caenicola strain SIT8, isolated from the human gut

Mamadou Beye (5090471)
Sofiane Bakour (184734)
Sory Traore (5090477)
Jaishriram Rathored (3438773)
NoĂŠmie Labas (5090474)
Didier Raoult (3833)
Pierre-Edouard Fournier (13453)

April 2018

Table S1. Fatty acid composition of Fermentimonas caenicola strain SIT8. Table S2. Number of specifi...

Additional file 1: Table S1. of Complete genome sequence of the molybdenum-resistant bacterium Bacillus subtilis strain LM 4â2

Xiao-Yan You (3534731)
Hui Wang (30400)
Guang-Yue Ren (3534725)
Jing-Jing Li (216056)
Xu Duan (3534722)
Hua-Jun Zheng (176350)
Zheng-Qiang Jiang (3534728)

December 2015

The results of ANI, AAI and GGDH value between genomes of strain LM 4-2 and other 30 complete sequen...

Additional file 6: of Genome-scale analysis of syngas fermenting acetogenic bacteria reveals the translational regulation for its autotrophic growth

Yoseb Song (5809286)
Jongoh Shin (6006008)
Sangrak Jin (6006011)
Jung-Kul Lee (451432)
Dong Kim (443919)
Sun Kim (28274)
Suhyung Cho (60618)
Byung-Kwan Cho (143434)

November 2018

Table S6. Transcription profile of genes associated with energy conservation (DOCX 17 kb

Additional file 1: of High-quality-draft genome sequence of the multiple heavy metal resistant bacterium Pseudaminobacter manganicus JH-7T

Xian Xia (398501)
Jiahong Li (1608247)
Zijie Zhou (4890928)
Dan Wang (34472)
Jing Huang (41604)
Gejiao Wang (115157)

October 2018

Table S1. Putative heavy metal(loid)s resistance proteins. Table S2. Putative nucleotide sugars bios...

Additional file 1: of Genome-scale analysis of syngas fermenting acetogenic bacteria reveals the translational regulation for its autotrophic growth

Yoseb Song (5809286)
Jongoh Shin (6006008)
Sangrak Jin (6006011)
Jung-Kul Lee (451432)
Dong Kim (443919)
Sun Kim (28274)
Suhyung Cho (60618)
Byung-Kwan Cho (143434)

November 2018

Table S1. Transcription expression of genes in Eubacterium limosum under heterotrophic and autotroph...

Additional file 2: Table S2. of Genome sequencing and analysis of the first spontaneous Nanosilver resistant bacterium Proteus mirabilis strain SCDR1

Amr Saeb (4614241)
Khalid Al-Rubeaan (526186)
Mohamed Abouelhoda (3463481)
Manojkumar Selvaraju (4614238)
Hamsa Tayeb (4614244)

November 2017

Distribution of unique gene counts amongst pathways Classes and subclasses. (DOCX 16 kb

Additional file 2: Table S2. of First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77

Ram Singh (594217)
Sonam Gaba (3431615)
Ajar Yadav (3431618)
Prakhar Gaur (125760)
Sneha Gulati (3431612)
Rajeev Kaushik (3431609)
Anil Saxena (3431621)

August 2016

Quantitative analysis of amino acids content of Arthrobacter agilis strain L77 by HPLC. (DOCX 15Â kb

Additional file 1: Table S1. of First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77

Ram Singh (594217)
Sonam Gaba (3431615)
Ajar Yadav (3431618)
Prakhar Gaur (125760)
Sneha Gulati (3431612)
Rajeev Kaushik (3431609)
Anil Saxena (3431621)

August 2016

Quantitative analysis of organic acid and sugars/polyols from Arthrobacter agilis strain L77 by HPLC...

Genome-Guided Analysis and Whole Transcriptome Profiling of the Mesophilic Syntrophic Acetate Oxidising Bacterium Syntrophaceticus schinkii.

Shahid Manzoor
Erik Bongcam-Rudloff
Anna Schnürer
Bettina Müller

January 2016

Syntrophaceticus schinkii is a mesophilic, anaerobic bacterium capable of oxidising acetate to CO2 a...

Additional file 1: Figure S1. of Complete genome sequence of Methanospirillum hungatei type strain JF1

Robert Gunsalus (3535415)
Lauren Cook (3535424)
Bryan Crable (2508007)
Lars Rohlin (2507734)
Erin McDonald (3535409)
Housna Mouttaki (3535427)
Jessica Sieber (3535412)
Nicole Poweleit (3535421)
Hong Zhou (29614)
Alla Lapidus (6321)
Hajnalka Daligault (226568)
Miriam Land (34698)
Paul Gilna (53476)
Natalia Ivanova (8850)
Nikos Kyrpides (8859)
David Culley (3535430)
Michael McInerney (3535418)

January 2016

Best reciprocal protein hits for M. hungatei JF1 ORFs with other genomes. (DOCX 89Â kb

Additional file 7: of Genome-scale analysis of syngas fermenting acetogenic bacteria reveals the translational regulation for its autotrophic growth

Yoseb Song (5809286)
Jongoh Shin (6006008)
Sangrak Jin (6006011)
Jung-Kul Lee (451432)
Dong Kim (443919)
Sun Kim (28274)
Suhyung Cho (60618)
Byung-Kwan Cho (143434)

November 2018

Table S7. Transcription profile of genes associated with central carbon metabolism (DOCX 20 kb

Additional file 3: of Genome-scale analysis of syngas fermenting acetogenic bacteria reveals the translational regulation for its autotrophic growth

Yoseb Song (5809286)
Jongoh Shin (6006008)
Sangrak Jin (6006011)
Jung-Kul Lee (451432)
Dong Kim (443919)
Sun Kim (28274)
Suhyung Cho (60618)
Byung-Kwan Cho (143434)

November 2018

Table S3. COG functional assignments of differently expressed genes (DEGs) in Eubacterium limosum be...

Additional file 2: of Complete genome sequence of the nitrogen-fixing bacterium Azospirillum humicireducens type strain SgZ-5T

Zhen Yu (203197)
Guiqin Yang (3468794)
Xiaoming Liu (47653)
Yueqiang Wang (564526)
Li Zhuang (120307)
Shungui Zhou (1659310)

October 2018

Genes of A. humicireducens SgZ-5T involved in biosynthesis of tryptophan. (DOCX 16Â kb

Additional file 3: of Complete genome sequence of the nitrogen-fixing bacterium Azospirillum humicireducens type strain SgZ-5T

Zhen Yu (203197)
Guiqin Yang (3468794)
Xiaoming Liu (47653)
Yueqiang Wang (564526)
Li Zhuang (120307)
Shungui Zhou (1659310)

October 2018

Genes of A. humicireducens SgZ-5T located in a terpene gene cluster. (DOCX 16Â kb

Additional file 1: of Working draft genome sequence of the mesophilic acetate oxidizing bacterium Syntrophaceticus schinkii strain Sp3

Abstract

Extracted data

Additional file 1: of Working draft genome sequence of the mesophilic acetate oxidizing bacterium Syntrophaceticus schinkii strain Sp3

Abstract

Extracted data

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