Additional file 4: of Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Additional file 12: Table S8. of Diatom flagellar genes and their expression during sexual reproduction in Leptocylindrus danicus

Deepak Nanjappa (617434)
Remo Sanges (23742)
Maria Ferrante (3469385)
Adriana Zingone (248480)

October 2017

Sequences of the forward and reverse primers for six selected flagella genes and three reference gen...

Additional file 11: Figure S7. of Diatom flagellar genes and their expression during sexual reproduction in Leptocylindrus danicus

Deepak Nanjappa (617434)
Remo Sanges (23742)
Maria Ferrante (3469385)
Adriana Zingone (248480)

October 2017

Maximum likelihood tree inferred from IFT88 peptide sequences illustrating the relationship among Le...

Additional file 4: of Homoeolog expression bias in allopolyploid oleaginous marine diatom Fistulifera solaris

Tatsuhiro Nomaguchi (5176967)
Yoshiaki Maeda (1721908)
Tomoko Yoshino (295781)
Toru Asahi (1964932)
Leila Tirichine (3467390)
Chris Bowler (6076)
Tsuyoshi Tanaka (14084)

May 2018

Figure S3. Comparison of GC content at the third codon position (dGC3) between pairs of homoeologous...

Additional file 3: of Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Shrikant Patil (798778)
Sara Moeys (3469376)
Peter von Dassow (597486)
Marie Huysman (3469382)
Daniel Mapleson (3469379)
Lieven De Veylder (149051)
Remo Sanges (23742)
Wim Vyverman (221977)
Marina Montresor (451007)
Maria Ferrante (3469385)

November 2015

Multiple sequence alignment of Spo11 proteins used in building the phylogenetic tree of Spo11, shown...

Additional file 2: of Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Shrikant Patil (798778)
Sara Moeys (3469376)
Peter von Dassow (597486)
Marie Huysman (3469382)
Daniel Mapleson (3469379)
Lieven De Veylder (149051)
Remo Sanges (23742)
Wim Vyverman (221977)
Marina Montresor (451007)
Maria Ferrante (3469385)

November 2015

Multiple sequence alignment of Rec8/Rad21proteins used in building the phylogenetic tree of Rad21, s...

Additional file 7: of Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Shrikant Patil (798778)
Sara Moeys (3469376)
Peter von Dassow (597486)
Marie Huysman (3469382)
Daniel Mapleson (3469379)
Lieven De Veylder (149051)
Remo Sanges (23742)
Wim Vyverman (221977)
Marina Montresor (451007)
Maria Ferrante (3469385)

November 2015

Gene models for meiotic genes from the Pseudo-nitzschia multistriata genome. (DOCX 142 kb

Additional file 8: of Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Shrikant Patil (798778)
Sara Moeys (3469376)
Peter von Dassow (597486)
Marie Huysman (3469382)
Daniel Mapleson (3469379)
Lieven De Veylder (149051)
Remo Sanges (23742)
Wim Vyverman (221977)
Marina Montresor (451007)
Maria Ferrante (3469385)

November 2015

Protein sequences for meiotic genes from the Pseudo-nitzschia multistriata genome in fasta format. (...

Additional file 10: of Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Shrikant Patil (798778)
Sara Moeys (3469376)
Peter von Dassow (597486)
Marie Huysman (3469382)
Daniel Mapleson (3469379)
Lieven De Veylder (149051)
Remo Sanges (23742)
Wim Vyverman (221977)
Marina Montresor (451007)
Maria Ferrante (3469385)

November 2015

Protein sequences for meiotic genes for Seminavis robusta in fasta format. (FAS 37 kb

Additional file 5: Table S1. of Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Shrikant Patil (798778)
Sara Moeys (3469376)
Peter von Dassow (597486)
Marie Huysman (3469382)
Daniel Mapleson (3469379)
Lieven De Veylder (149051)
Remo Sanges (23742)
Wim Vyverman (221977)
Marina Montresor (451007)
Maria Ferrante (3469385)

November 2015

Overview of phylogenetic distribution of core meiotic proteins among eukaryotes [11, 72, 133â142]....

Additional file 6: Figure S19. of Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Shrikant Patil (798778)
Sara Moeys (3469376)
Peter von Dassow (597486)
Marie Huysman (3469382)
Daniel Mapleson (3469379)
Lieven De Veylder (149051)
Remo Sanges (23742)
Wim Vyverman (221977)
Marina Montresor (451007)
Maria Ferrante (3469385)

November 2015

Expression profiles of SPO11-2 and SPO11-3/TOP VIA homologs in Thalassiosira weissflogii during sper...

Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Patil, Shrikant
Moeys, Sara
von Dassow, Peter
Huysman, Marie J. J.
Mapleson, Daniel
De Veylder, Lieven
Sanges, Remo
Vyverman, Wim
Montresor, Marina
Ferrante, Maria Immacolata

January 2015

Background: Sexual reproduction is an obligate phase in the life cycle of most eukaryotes. Meiosis v...

Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta (vol 16, 930, 2015)

Patil, Shrikant
Moeys, Sara
von Dassow, Peter
Huysman, Marie
Mapleson, Daniel
De Veylder, Lieven
Sanges, Remo
Vyverman, Wim
Montresor, Marina
Ferrante, Maria Immacolata

January 2019

Following the publication of this article [1], the authors reported that the link to Additionalfile1...

Additional file 7: of Comparative genomics provides new insights into the diversity, physiology, and sexuality of the only industrially exploited tremellomycete: Phaffia rhodozyma

Nicolás Bellora (45255)
Martín Moliné (3488867)
Márcia David-Palma (3165348)
Marco Coelho (3488864)
Chris Hittinger (821003)
José Sampaio (3488870)
Paula Gonçalves (129720)
Diego Libkind (3158151)

November 2016

Protein multiple sequence alignment used for cladogram construction (related to Fig. 3). (NEX 1505 k...

Additional file 2: of Two divergent Symbiodinium genomes reveal conservation of a gene cluster for sunscreen biosynthesis and recently lost genes

Eiichi Shoguchi (700088)
Girish Beedessee (178828)
Ipputa Tada (3840019)
Kanako Hisata (3456587)
Takeshi Kawashima (3456581)
Takeshi Takeuchi (2814376)
Nana Arakaki (5393330)
Manabu Fujie (3456578)
Ryo Koyanagi (3456599)
Michael Roy (3521462)
Masanobu Kawachi (492757)
Michio Hidaka (5393333)
Noriyuki Satoh (765940)
Chuya Shinzato (60715)

June 2018

Figure S1. A screen shot of scaffold 314 on the SymA genome browser, which is accessible via http://...

Additional file 1: of Homoeolog expression bias in allopolyploid oleaginous marine diatom Fistulifera solaris

Tatsuhiro Nomaguchi (5176967)
Yoshiaki Maeda (1721908)
Tomoko Yoshino (295781)
Toru Asahi (1964932)
Leila Tirichine (3467390)
Chris Bowler (6076)
Tsuyoshi Tanaka (14084)

May 2018

Figure S1. Structure of dGC flip over region on chromosome 10. (A) Orange and blue colors of the pen...

Additional file 12: Table S8. of Diatom flagellar genes and their expression during sexual reproduction in Leptocylindrus danicus

Deepak Nanjappa (617434)
Remo Sanges (23742)
Maria Ferrante (3469385)
Adriana Zingone (248480)

October 2017

Sequences of the forward and reverse primers for six selected flagella genes and three reference gen...

Additional file 11: Figure S7. of Diatom flagellar genes and their expression during sexual reproduction in Leptocylindrus danicus

Deepak Nanjappa (617434)
Remo Sanges (23742)
Maria Ferrante (3469385)
Adriana Zingone (248480)

October 2017

Maximum likelihood tree inferred from IFT88 peptide sequences illustrating the relationship among Le...

Additional file 4: of Homoeolog expression bias in allopolyploid oleaginous marine diatom Fistulifera solaris

Tatsuhiro Nomaguchi (5176967)
Yoshiaki Maeda (1721908)
Tomoko Yoshino (295781)
Toru Asahi (1964932)
Leila Tirichine (3467390)
Chris Bowler (6076)
Tsuyoshi Tanaka (14084)

May 2018

Figure S3. Comparison of GC content at the third codon position (dGC3) between pairs of homoeologous...

Additional file 3: of Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Shrikant Patil (798778)
Sara Moeys (3469376)
Peter von Dassow (597486)
Marie Huysman (3469382)
Daniel Mapleson (3469379)
Lieven De Veylder (149051)
Remo Sanges (23742)
Wim Vyverman (221977)
Marina Montresor (451007)
Maria Ferrante (3469385)

November 2015

Multiple sequence alignment of Spo11 proteins used in building the phylogenetic tree of Spo11, shown...

Additional file 2: of Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Shrikant Patil (798778)
Sara Moeys (3469376)
Peter von Dassow (597486)
Marie Huysman (3469382)
Daniel Mapleson (3469379)
Lieven De Veylder (149051)
Remo Sanges (23742)
Wim Vyverman (221977)
Marina Montresor (451007)
Maria Ferrante (3469385)

November 2015

Multiple sequence alignment of Rec8/Rad21proteins used in building the phylogenetic tree of Rad21, s...

Additional file 7: of Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Shrikant Patil (798778)
Sara Moeys (3469376)
Peter von Dassow (597486)
Marie Huysman (3469382)
Daniel Mapleson (3469379)
Lieven De Veylder (149051)
Remo Sanges (23742)
Wim Vyverman (221977)
Marina Montresor (451007)
Maria Ferrante (3469385)

November 2015

Gene models for meiotic genes from the Pseudo-nitzschia multistriata genome. (DOCX 142 kb

Additional file 8: of Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Shrikant Patil (798778)
Sara Moeys (3469376)
Peter von Dassow (597486)
Marie Huysman (3469382)
Daniel Mapleson (3469379)
Lieven De Veylder (149051)
Remo Sanges (23742)
Wim Vyverman (221977)
Marina Montresor (451007)
Maria Ferrante (3469385)

November 2015

Protein sequences for meiotic genes from the Pseudo-nitzschia multistriata genome in fasta format. (...

Additional file 10: of Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Shrikant Patil (798778)
Sara Moeys (3469376)
Peter von Dassow (597486)
Marie Huysman (3469382)
Daniel Mapleson (3469379)
Lieven De Veylder (149051)
Remo Sanges (23742)
Wim Vyverman (221977)
Marina Montresor (451007)
Maria Ferrante (3469385)

November 2015

Protein sequences for meiotic genes for Seminavis robusta in fasta format. (FAS 37 kb

Additional file 5: Table S1. of Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Shrikant Patil (798778)
Sara Moeys (3469376)
Peter von Dassow (597486)
Marie Huysman (3469382)
Daniel Mapleson (3469379)
Lieven De Veylder (149051)
Remo Sanges (23742)
Wim Vyverman (221977)
Marina Montresor (451007)
Maria Ferrante (3469385)

November 2015

Overview of phylogenetic distribution of core meiotic proteins among eukaryotes [11, 72, 133â142]....

Additional file 6: Figure S19. of Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Shrikant Patil (798778)
Sara Moeys (3469376)
Peter von Dassow (597486)
Marie Huysman (3469382)
Daniel Mapleson (3469379)
Lieven De Veylder (149051)
Remo Sanges (23742)
Wim Vyverman (221977)
Marina Montresor (451007)
Maria Ferrante (3469385)

November 2015

Expression profiles of SPO11-2 and SPO11-3/TOP VIA homologs in Thalassiosira weissflogii during sper...

Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Patil, Shrikant
Moeys, Sara
von Dassow, Peter
Huysman, Marie J. J.
Mapleson, Daniel
De Veylder, Lieven
Sanges, Remo
Vyverman, Wim
Montresor, Marina
Ferrante, Maria Immacolata

January 2015

Background: Sexual reproduction is an obligate phase in the life cycle of most eukaryotes. Meiosis v...

Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta (vol 16, 930, 2015)

Patil, Shrikant
Moeys, Sara
von Dassow, Peter
Huysman, Marie
Mapleson, Daniel
De Veylder, Lieven
Sanges, Remo
Vyverman, Wim
Montresor, Marina
Ferrante, Maria Immacolata

January 2019

Following the publication of this article [1], the authors reported that the link to Additionalfile1...

Additional file 7: of Comparative genomics provides new insights into the diversity, physiology, and sexuality of the only industrially exploited tremellomycete: Phaffia rhodozyma

Nicolás Bellora (45255)
Martín Moliné (3488867)
Márcia David-Palma (3165348)
Marco Coelho (3488864)
Chris Hittinger (821003)
José Sampaio (3488870)
Paula Gonçalves (129720)
Diego Libkind (3158151)

November 2016

Protein multiple sequence alignment used for cladogram construction (related to Fig. 3). (NEX 1505 k...

Additional file 2: of Two divergent Symbiodinium genomes reveal conservation of a gene cluster for sunscreen biosynthesis and recently lost genes

Eiichi Shoguchi (700088)
Girish Beedessee (178828)
Ipputa Tada (3840019)
Kanako Hisata (3456587)
Takeshi Kawashima (3456581)
Takeshi Takeuchi (2814376)
Nana Arakaki (5393330)
Manabu Fujie (3456578)
Ryo Koyanagi (3456599)
Michael Roy (3521462)
Masanobu Kawachi (492757)
Michio Hidaka (5393333)
Noriyuki Satoh (765940)
Chuya Shinzato (60715)

June 2018

Figure S1. A screen shot of scaffold 314 on the SymA genome browser, which is accessible via http://...

Additional file 1: of Homoeolog expression bias in allopolyploid oleaginous marine diatom Fistulifera solaris

Tatsuhiro Nomaguchi (5176967)
Yoshiaki Maeda (1721908)
Tomoko Yoshino (295781)
Toru Asahi (1964932)
Leila Tirichine (3467390)
Chris Bowler (6076)
Tsuyoshi Tanaka (14084)

May 2018

Figure S1. Structure of dGC flip over region on chromosome 10. (A) Orange and blue colors of the pen...

Additional file 12: Table S8. of Diatom flagellar genes and their expression during sexual reproduction in Leptocylindrus danicus

Deepak Nanjappa (617434)
Remo Sanges (23742)
Maria Ferrante (3469385)
Adriana Zingone (248480)

October 2017

Sequences of the forward and reverse primers for six selected flagella genes and three reference gen...

Additional file 11: Figure S7. of Diatom flagellar genes and their expression during sexual reproduction in Leptocylindrus danicus

Deepak Nanjappa (617434)
Remo Sanges (23742)
Maria Ferrante (3469385)
Adriana Zingone (248480)

October 2017

Maximum likelihood tree inferred from IFT88 peptide sequences illustrating the relationship among Le...

Additional file 4: of Homoeolog expression bias in allopolyploid oleaginous marine diatom Fistulifera solaris

Tatsuhiro Nomaguchi (5176967)
Yoshiaki Maeda (1721908)
Tomoko Yoshino (295781)
Toru Asahi (1964932)
Leila Tirichine (3467390)
Chris Bowler (6076)
Tsuyoshi Tanaka (14084)

May 2018

Figure S3. Comparison of GC content at the third codon position (dGC3) between pairs of homoeologous...

Additional file 4: of Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Abstract

Extracted data

Additional file 4: of Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species Pseudo-nitzschia multistriata and Seminavis robusta

Abstract

Extracted data

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