Inferring the Clonal Structure of Viral Populations from Time Series Sequencing - Fig 7

<p>(A) Mutation prevalences of six mutations in segment 4. (B) Prevalences of the ten associated clones. (C) Two tables of linked mutations exhibiting network like relationship of mutations 709 and 1401, and tree like relationship of 1387 and 1401. (D) The phylogenetic network of the single fitted cloneset. (E) One of 22 possible recombination networks that arise from (D). (F) Probable tree structure from (E) after template switching is considered.