Upregulated genes in AD (Br5â6). Molecular networks are presented which were generated by the core analysis of the Ingenuity knowledge database (see also Methods section and www.ingenuity.com for explanation and details). The symbols (with Genbank Gene name) in the network come from: input genes (Additional file 6: Table S3: upregulated genes in AD Br5â6) see also description below (Additional file 5: Figure S3). (PDF 17491 kb
Table S4. List of Biological Terms for GO Network in Figure S8. GO, gene ontology; UP, UniProt; KEGG...
Additional file 3: Table S3. Geneset Annotations: Worksheets contain pathways enriched among genes u...
<p>Molecular network generated from our microarray <i>Highest expressed NPE sub-dataset</i>. Grey sy...
Contains compilations of lists of (disease) genes previously implicated in relevant disease. The ent...
See description for Additional file 7: Figure S4, but now the input used are the down-regulated gene...
In this file a standard output of the most established and most simple (linear) representation of bi...
Contains the specifications of genes upregulated in CPE Br(5â6) compared to CPE Br(0,1). (XLSX 26 ...
Contains the specifications of genes downregulated in CPE Br(5â6) compared to CPE Br(0,1). (XLSX 3...
Table S3. Enriched GO terms (p-value<0.01) of all condition-specific modules. Table S4. Enriched KEG...
Table S2. List of 30âAD-specific modules and 31 normal-specific modules. (XLSX 27 kb
Table S5. Modules with targets of specific differentially expressed TF enriched in certain pathways....
Table S1. Comparison of module genes identified by lmQCM and WGCNA from GSE48350 AD samples. (XLSX 1...
Figure S9. GO Network Analysis for Differential Protein Abundance Between AD and AsymAD. Proteins wi...
Cryostate sections of choroid plexus of a control patient (Braak stage 0) showing double staining fo...
Table S4. Gene ontology (GO) term enrichment for differentially expressed proteins in AD. The enrich...
Table S4. List of Biological Terms for GO Network in Figure S8. GO, gene ontology; UP, UniProt; KEGG...
Additional file 3: Table S3. Geneset Annotations: Worksheets contain pathways enriched among genes u...
<p>Molecular network generated from our microarray <i>Highest expressed NPE sub-dataset</i>. Grey sy...
Contains compilations of lists of (disease) genes previously implicated in relevant disease. The ent...
See description for Additional file 7: Figure S4, but now the input used are the down-regulated gene...
In this file a standard output of the most established and most simple (linear) representation of bi...
Contains the specifications of genes upregulated in CPE Br(5â6) compared to CPE Br(0,1). (XLSX 26 ...
Contains the specifications of genes downregulated in CPE Br(5â6) compared to CPE Br(0,1). (XLSX 3...
Table S3. Enriched GO terms (p-value<0.01) of all condition-specific modules. Table S4. Enriched KEG...
Table S2. List of 30âAD-specific modules and 31 normal-specific modules. (XLSX 27 kb
Table S5. Modules with targets of specific differentially expressed TF enriched in certain pathways....
Table S1. Comparison of module genes identified by lmQCM and WGCNA from GSE48350 AD samples. (XLSX 1...
Figure S9. GO Network Analysis for Differential Protein Abundance Between AD and AsymAD. Proteins wi...
Cryostate sections of choroid plexus of a control patient (Braak stage 0) showing double staining fo...
Table S4. Gene ontology (GO) term enrichment for differentially expressed proteins in AD. The enrich...
Table S4. List of Biological Terms for GO Network in Figure S8. GO, gene ontology; UP, UniProt; KEGG...
Additional file 3: Table S3. Geneset Annotations: Worksheets contain pathways enriched among genes u...
<p>Molecular network generated from our microarray <i>Highest expressed NPE sub-dataset</i>. Grey sy...